RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 MAMLD1Q13495 774 aa18.64■□□□□ 0.57
NCKIPSD-209ENST00000470006 RAPSNQ13702 412 aa18.64■□□□□ 0.57
NCKIPSD-209ENST00000470006 GPR18Q14330 331 aa18.64■□□□□ 0.57
NCKIPSD-209ENST00000470006 IQCKQ8N0W5 287 aa18.64■□□□□ 0.57
NCKIPSD-209ENST00000470006 SLC34A3Q8N130 599 aa18.64■□□□□ 0.57
NCKIPSD-209ENST00000470006 CISD2Q8N5K1 135 aaKnown RBP18.64■□□□□ 0.57
NCKIPSD-209ENST00000470006 RBMXL3Q8N7X1 1067 aaKnown RBP18.64■□□□□ 0.57
NCKIPSD-209ENST00000470006 LPCAT1Q8NF37 534 aa18.64■□□□□ 0.57
NCKIPSD-209ENST00000470006 CCHCR1Q8TD31 782 aa18.64■□□□□ 0.57
NCKIPSD-209ENST00000470006 SNRNP40Q96DI7 357 aaKnown RBP18.64■□□□□ 0.57
NCKIPSD-209ENST00000470006 FCRL4Q96PJ5 515 aa18.64■□□□□ 0.57
NCKIPSD-209ENST00000470006 MLPHQ9BV36 600 aaPredicted RBP18.64■□□□□ 0.57
NCKIPSD-209ENST00000470006 NUDT9Q9BW91 350 aa18.64■□□□□ 0.57
NCKIPSD-209ENST00000470006 POLR1EQ9GZS1 481 aaKnown RBP18.64■□□□□ 0.57
NCKIPSD-209ENST00000470006 WASH6PQ9NQA3 447 aa18.64■□□□□ 0.57
NCKIPSD-209ENST00000470006 ASF1BQ9NVP2 202 aa18.64■□□□□ 0.57
NCKIPSD-209ENST00000470006 GPR83Q9NYM4 423 aa18.64■□□□□ 0.57
NCKIPSD-209ENST00000470006 TRIM10Q9UDY6 481 aa18.64■□□□□ 0.57
NCKIPSD-209ENST00000470006 SNX7Q9UNH6 387 aa18.64■□□□□ 0.57
NCKIPSD-209ENST00000470006 IGHV5-51A0A0C4DH38 117 aa18.63■□□□□ 0.57
NCKIPSD-209ENST00000470006 ATMINO43313 823 aaPredicted RBP18.63■□□□□ 0.57
NCKIPSD-209ENST00000470006 KRT38O76015 456 aa18.63■□□□□ 0.57
NCKIPSD-209ENST00000470006 SLC25A14O95258 325 aaPredicted RBP18.63■□□□□ 0.57
NCKIPSD-209ENST00000470006 EBLN1P0CF75 366 aa18.63■□□□□ 0.57
NCKIPSD-209ENST00000470006 LPOP22079 712 aaPredicted RBP18.63■□□□□ 0.57
NCKIPSD-209ENST00000470006 CA4P22748 312 aa18.63■□□□□ 0.57
NCKIPSD-209ENST00000470006 SPINT3P49223 89 aa18.63■□□□□ 0.57
NCKIPSD-209ENST00000470006 DPCR1Q3MIW9 517 aa18.63■□□□□ 0.57
NCKIPSD-209ENST00000470006 HENMT1Q5T8I9 393 aaKnown RBP18.63■□□□□ 0.57
NCKIPSD-209ENST00000470006 BPHLQ86WA6 291 aaPredicted RBP18.63■□□□□ 0.57
NCKIPSD-209ENST00000470006 TMEM126BQ8IUX1 230 aa18.63■□□□□ 0.57
NCKIPSD-209ENST00000470006 PSTKQ8IV42 348 aaKnown RBP18.63■□□□□ 0.57
NCKIPSD-209ENST00000470006 NEK11Q8NG66 645 aa18.63■□□□□ 0.57
NCKIPSD-209ENST00000470006 UBXN4Q92575 508 aa18.63■□□□□ 0.57
NCKIPSD-209ENST00000470006 HSPH1Q92598 858 aa18.63■□□□□ 0.57
NCKIPSD-209ENST00000470006 MARVELD3Q96A59 401 aa18.63■□□□□ 0.57
NCKIPSD-209ENST00000470006 WDR24Q96S15 920 aa18.63■□□□□ 0.57
NCKIPSD-209ENST00000470006 SPATA16Q9BXB7 569 aa18.63■□□□□ 0.57
NCKIPSD-209ENST00000470006 POT1Q9NUX5 634 aa18.63■□□□□ 0.57
NCKIPSD-209ENST00000470006 SLC23A2Q9UGH3 650 aa18.63■□□□□ 0.57
NCKIPSD-209ENST00000470006 SSU72P8A0A1W2PR75 194 aa18.62■□□□□ 0.57
NCKIPSD-209ENST00000470006 OR52A4PA6NMU1 304 aa18.62■□□□□ 0.57
NCKIPSD-209ENST00000470006 F5H423 210 aaPredicted RBP18.62■□□□□ 0.57
NCKIPSD-209ENST00000470006 CPNE3O75131 537 aaKnown RBP18.62■□□□□ 0.57
NCKIPSD-209ENST00000470006 SCRG1O75711 98 aa18.62■□□□□ 0.57
NCKIPSD-209ENST00000470006 CEACAM4O75871 244 aa18.62■□□□□ 0.57
NCKIPSD-209ENST00000470006 KLK3P07288 261 aaPredicted RBP18.62■□□□□ 0.57
NCKIPSD-209ENST00000470006 PPP1CAP62136 330 aa18.62■□□□□ 0.57
NCKIPSD-209ENST00000470006 KYNUQ16719 465 aa18.62■□□□□ 0.57
NCKIPSD-209ENST00000470006 SMTNL2Q2TAL5 461 aa18.62■□□□□ 0.57
NCKIPSD-209ENST00000470006 ANKRD20A8PQ5CZ79 823 aa18.62■□□□□ 0.57
NCKIPSD-209ENST00000470006 ZNF569Q5MCW4 686 aa18.62■□□□□ 0.57
NCKIPSD-209ENST00000470006 TRIM39Q9HCM9 518 aa18.62■□□□□ 0.57
NCKIPSD-209ENST00000470006 SLC40A1Q9NP59 571 aa18.62■□□□□ 0.57
NCKIPSD-209ENST00000470006 FGF21Q9NSA1 209 aa18.62■□□□□ 0.57
NCKIPSD-209ENST00000470006 EPHA6Q9UF33 1036 aa18.62■□□□□ 0.57
NCKIPSD-209ENST00000470006 DIDO1Q9BTC0 2240 aaKnown RBP18.62■□□□□ 0.57
NCKIPSD-209ENST00000470006 KMOO15229 486 aa18.61■□□□□ 0.57
NCKIPSD-209ENST00000470006 HNRNPRO43390 633 aaKnown RBP18.61■□□□□ 0.57
NCKIPSD-209ENST00000470006 ZNF7P17097 686 aaPredicted RBP18.61■□□□□ 0.57
NCKIPSD-209ENST00000470006 SERPINB6P35237 376 aa18.61■□□□□ 0.57
NCKIPSD-209ENST00000470006 DRG2P55039 364 aaKnown RBP18.61■□□□□ 0.57
NCKIPSD-209ENST00000470006 ITGA1P56199 1179 aa18.61■□□□□ 0.57
NCKIPSD-209ENST00000470006 DSC2Q02487 901 aa18.61■□□□□ 0.57
NCKIPSD-209ENST00000470006 PLEKHN1Q494U1 663 aaPredicted RBP18.61■□□□□ 0.57
NCKIPSD-209ENST00000470006 ALS2CLQ60I27 953 aa18.61■□□□□ 0.57
NCKIPSD-209ENST00000470006 CYP4V2Q6ZWL3 525 aaPredicted RBP18.61■□□□□ 0.57
NCKIPSD-209ENST00000470006 LRRTM4Q86VH4 590 aa18.61■□□□□ 0.57
NCKIPSD-209ENST00000470006 RBM12BQ8IXT5 1001 aaKnown RBP18.61■□□□□ 0.57
NCKIPSD-209ENST00000470006 RAVER1Q8IY67 606 aaKnown RBP18.61■□□□□ 0.57
NCKIPSD-209ENST00000470006 ENDOVQ8N8Q3 282 aaKnown RBP18.61■□□□□ 0.57
NCKIPSD-209ENST00000470006 ZNF653Q96CK0 615 aa18.61■□□□□ 0.57
NCKIPSD-209ENST00000470006 ZNF514Q96K75 400 aaPredicted RBP18.61■□□□□ 0.57
NCKIPSD-209ENST00000470006 CHST8Q9H2A9 424 aa18.61■□□□□ 0.57
NCKIPSD-209ENST00000470006 PCDH9Q9HC56 1237 aa18.61■□□□□ 0.57
NCKIPSD-209ENST00000470006 TAS2R14Q9NYV8 317 aa18.61■□□□□ 0.57
NCKIPSD-209ENST00000470006 OTOGQ6ZRI0 2925 aa18.6■□□□□ 0.57
NCKIPSD-209ENST00000470006 UBA6A0AVT1 1052 aaPredicted RBP18.6■□□□□ 0.57
NCKIPSD-209ENST00000470006 IDSP22304 550 aa18.6■□□□□ 0.57
NCKIPSD-209ENST00000470006 RRADP55042 308 aa18.6■□□□□ 0.57
NCKIPSD-209ENST00000470006 KLHL35Q6PF15 583 aa18.6■□□□□ 0.57
NCKIPSD-209ENST00000470006 CERS6Q6ZMG9 384 aa18.6■□□□□ 0.57
NCKIPSD-209ENST00000470006 SLC41A2Q96JW4 573 aa18.6■□□□□ 0.57
NCKIPSD-209ENST00000470006 TDRD1Q9BXT4 1180 aaKnown RBP18.6■□□□□ 0.57
NCKIPSD-209ENST00000470006 TRIM7Q9C029 511 aa18.6■□□□□ 0.57
NCKIPSD-209ENST00000470006 HAUS2Q9NVX0 235 aa18.6■□□□□ 0.57
NCKIPSD-209ENST00000470006 RGSL1A5PLK6 1076 aa18.59■□□□□ 0.57
NCKIPSD-209ENST00000470006 TMEM191CA6NGB0 347 aa18.59■□□□□ 0.57
NCKIPSD-209ENST00000470006 GPR89AB7ZAQ6 455 aa18.59■□□□□ 0.57
NCKIPSD-209ENST00000470006 GPR89BP0CG08 455 aa18.59■□□□□ 0.57
NCKIPSD-209ENST00000470006 CES1P23141 567 aa18.59■□□□□ 0.57
NCKIPSD-209ENST00000470006 IL4RP24394 825 aa18.59■□□□□ 0.57
NCKIPSD-209ENST00000470006 HALP42357 657 aa18.59■□□□□ 0.57
NCKIPSD-209ENST00000470006 VAV2P52735 878 aa18.59■□□□□ 0.57
NCKIPSD-209ENST00000470006 GPS2Q13227 327 aa18.59■□□□□ 0.57
NCKIPSD-209ENST00000470006 LAMB3Q13751 1172 aa18.59■□□□□ 0.57
NCKIPSD-209ENST00000470006 PLCL1Q15111 1095 aa18.59■□□□□ 0.57
NCKIPSD-209ENST00000470006 KRT31Q15323 416 aa18.59■□□□□ 0.57
NCKIPSD-209ENST00000470006 DNTTIP2Q5QJE6 756 aaKnown RBP18.59■□□□□ 0.57
NCKIPSD-209ENST00000470006 FAM69BQ5VUD6 431 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms