RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 GPR89BP0CG08 455 aa24.11■■□□□ 1.45
PTCH1-210ENST00000468211 TYRP1P17643 537 aa24.11■■□□□ 1.45
PTCH1-210ENST00000468211 NFKB1P19838 968 aa24.11■■□□□ 1.45
PTCH1-210ENST00000468211 CHRNA4P43681 627 aa24.11■■□□□ 1.45
PTCH1-210ENST00000468211 TBX2Q13207 712 aaPredicted RBP24.11■■□□□ 1.45
PTCH1-210ENST00000468211 ATP13A5Q4VNC0 1218 aa24.11■■□□□ 1.45
PTCH1-210ENST00000468211 TMEM26Q6ZUK4 368 aa24.11■■□□□ 1.45
PTCH1-210ENST00000468211 C11orf96Q7Z7L8 435 aa24.11■■□□□ 1.45
PTCH1-210ENST00000468211 TTC30BQ8N4P2 665 aa24.11■■□□□ 1.45
PTCH1-210ENST00000468211 TFB1MQ8WVM0 346 aaKnown RBP24.11■■□□□ 1.45
PTCH1-210ENST00000468211 RNF31Q96EP0 1072 aa24.11■■□□□ 1.45
PTCH1-210ENST00000468211 TEFMQ96QE5 360 aaKnown RBP24.11■■□□□ 1.45
PTCH1-210ENST00000468211 FAM117AQ9C073 453 aa24.11■■□□□ 1.45
PTCH1-210ENST00000468211 INTUQ9ULD6 942 aa24.11■■□□□ 1.45
PTCH1-210ENST00000468211 LOC101059948A0A1B0GTJ6 334 aa24.1■■□□□ 1.45
PTCH1-210ENST00000468211 LOC285095A0A1B0GVY8 99 aa24.1■■□□□ 1.45
PTCH1-210ENST00000468211 KMOO15229 486 aa24.1■■□□□ 1.45
PTCH1-210ENST00000468211 PTMSP20962 102 aa24.1■■□□□ 1.45
PTCH1-210ENST00000468211 RPL10P27635 214 aaKnown RBP24.1■■□□□ 1.45
PTCH1-210ENST00000468211 CA5AP35218 305 aa24.1■■□□□ 1.45
PTCH1-210ENST00000468211 MARCKSL1P49006 195 aa24.1■■□□□ 1.45
PTCH1-210ENST00000468211 NR2C2P49116 596 aa24.1■■□□□ 1.45
PTCH1-210ENST00000468211 WNT3AP56704 352 aa24.1■■□□□ 1.45
PTCH1-210ENST00000468211 UNC5BQ8IZJ1 945 aa24.1■■□□□ 1.45
PTCH1-210ENST00000468211 OXNAD1Q96HP4 312 aaPredicted RBP24.1■■□□□ 1.45
PTCH1-210ENST00000468211 VPS35Q96QK1 796 aa24.1■■□□□ 1.45
PTCH1-210ENST00000468211 TIMM29Q9BSF4 260 aa24.1■■□□□ 1.45
PTCH1-210ENST00000468211 TRIM4Q9C037 500 aa24.1■■□□□ 1.45
PTCH1-210ENST00000468211 TSPY26PQ9H489 355 aa24.1■■□□□ 1.45
PTCH1-210ENST00000468211 EPB41L1Q9H4G0 881 aa24.1■■□□□ 1.45
PTCH1-210ENST00000468211 UCK1Q9HA47 277 aa24.1■■□□□ 1.45
PTCH1-210ENST00000468211 SIDT1Q9NXL6 827 aaKnown RBP24.1■■□□□ 1.45
PTCH1-210ENST00000468211 TFR2Q9UP52 801 aa24.1■■□□□ 1.45
PTCH1-210ENST00000468211 ALG6Q9Y672 507 aa24.1■■□□□ 1.45
PTCH1-210ENST00000468211 GPR39O43194 453 aa24.09■■□□□ 1.45
PTCH1-210ENST00000468211 VEGFDO43915 354 aa24.09■■□□□ 1.45
PTCH1-210ENST00000468211 CDK14O94921 469 aa24.09■■□□□ 1.45
PTCH1-210ENST00000468211 C9P02748 559 aa24.09■■□□□ 1.45
PTCH1-210ENST00000468211 DRG2P55039 364 aaKnown RBP24.09■■□□□ 1.45
PTCH1-210ENST00000468211 SIRPB2Q5JXA9 342 aa24.09■■□□□ 1.45
PTCH1-210ENST00000468211 CCDC70Q6NSX1 233 aa24.09■■□□□ 1.45
PTCH1-210ENST00000468211 ABRAXAS1Q6UWZ7 409 aa24.09■■□□□ 1.45
PTCH1-210ENST00000468211 CEACAM20Q6UY09 585 aa24.09■■□□□ 1.45
PTCH1-210ENST00000468211 ZC3H18Q86VM9 953 aaKnown RBP24.09■■□□□ 1.45
PTCH1-210ENST00000468211 NLGN4XQ8N0W4 816 aa24.09■■□□□ 1.45
PTCH1-210ENST00000468211 SLC25A41Q8N5S1 370 aa24.09■■□□□ 1.45
PTCH1-210ENST00000468211 NLGN4YQ8NFZ3 816 aaPredicted RBP24.09■■□□□ 1.45
PTCH1-210ENST00000468211 HAUS1Q96CS2 278 aa24.09■■□□□ 1.45
PTCH1-210ENST00000468211 C9orf72Q96LT7 481 aa24.09■■□□□ 1.45
PTCH1-210ENST00000468211 IL26Q9NPH9 171 aa24.09■■□□□ 1.45
PTCH1-210ENST00000468211 FAM153AQ9UHL3 310 aa24.09■■□□□ 1.45
PTCH1-210ENST00000468211 OR52A4PA6NMU1 304 aa24.08■■□□□ 1.45
PTCH1-210ENST00000468211 PDZK1P1A8MUH7 402 aa24.08■■□□□ 1.45
PTCH1-210ENST00000468211 AKR1B15C9JRZ8 316 aaPredicted RBP24.08■■□□□ 1.45
PTCH1-210ENST00000468211 NKX2-8O15522 239 aa24.08■■□□□ 1.45
PTCH1-210ENST00000468211 PSTPIP1O43586 416 aa24.08■■□□□ 1.45
PTCH1-210ENST00000468211 STK17BO94768 372 aa24.08■■□□□ 1.45
PTCH1-210ENST00000468211 VIPP01282 170 aa24.08■■□□□ 1.45
PTCH1-210ENST00000468211 HMGCLP35914 325 aa24.08■■□□□ 1.45
PTCH1-210ENST00000468211 LEPRP48357 1165 aaKnown RBP24.08■■□□□ 1.45
PTCH1-210ENST00000468211 TFDP2Q14188 446 aa24.08■■□□□ 1.45
PTCH1-210ENST00000468211 PLXDC1Q8IUK5 500 aa24.08■■□□□ 1.45
PTCH1-210ENST00000468211 ZNF567Q8N184 647 aa24.08■■□□□ 1.45
PTCH1-210ENST00000468211 AVL9Q8NBF6 648 aa24.08■■□□□ 1.45
PTCH1-210ENST00000468211 MRGPRX2Q96LB1 330 aa24.08■■□□□ 1.45
PTCH1-210ENST00000468211 GEMIN8Q9NWZ8 242 aaKnown RBP24.08■■□□□ 1.45
PTCH1-210ENST00000468211 TRIM10Q9UDY6 481 aa24.08■■□□□ 1.45
PTCH1-210ENST00000468211 IL17BQ9UHF5 180 aa24.08■■□□□ 1.45
PTCH1-210ENST00000468211 TMEM184BQ9Y519 407 aaPredicted RBP24.08■■□□□ 1.45
PTCH1-210ENST00000468211 HEMK1Q9Y5R4 338 aaPredicted RBP24.08■■□□□ 1.45
PTCH1-210ENST00000468211 hCG_1818297A0A087WSY0 165 aa24.07■■□□□ 1.44
PTCH1-210ENST00000468211 BUD23O43709 281 aaKnown RBP24.07■■□□□ 1.44
PTCH1-210ENST00000468211 UBXN7O94888 489 aa24.07■■□□□ 1.44
PTCH1-210ENST00000468211 ANKRD34CP0C6C1 535 aa24.07■■□□□ 1.44
PTCH1-210ENST00000468211 HADHBP55084 474 aaKnown RBP24.07■■□□□ 1.44
PTCH1-210ENST00000468211 TMEM115Q12893 351 aaPredicted RBP24.07■■□□□ 1.44
PTCH1-210ENST00000468211 SKOR2Q2VWA4 1001 aaPredicted RBP24.07■■□□□ 1.44
PTCH1-210ENST00000468211 BZW1Q7L1Q6 419 aaKnown RBP24.07■■□□□ 1.44
PTCH1-210ENST00000468211 CNGA4Q8IV77 575 aa24.07■■□□□ 1.44
PTCH1-210ENST00000468211 TRIM48Q8IWZ4 208 aa24.07■■□□□ 1.44
PTCH1-210ENST00000468211 RSC1A1Q92681 617 aa24.07■■□□□ 1.44
PTCH1-210ENST00000468211 SLC45A3Q96JT2 553 aa24.07■■□□□ 1.44
PTCH1-210ENST00000468211 TGM7Q96PF1 710 aa24.07■■□□□ 1.44
PTCH1-210ENST00000468211 SRPK1Q96SB4 655 aaKnown RBP24.07■■□□□ 1.44
PTCH1-210ENST00000468211 GPN2Q9H9Y4 310 aaPredicted RBP24.07■■□□□ 1.44
PTCH1-210ENST00000468211 KLHL8Q9P2G9 620 aaPredicted RBP24.07■■□□□ 1.44
PTCH1-210ENST00000468211 WDR37Q9Y2I8 494 aa24.07■■□□□ 1.44
PTCH1-210ENST00000468211 POLR1CO15160 346 aaPredicted RBP24.06■■□□□ 1.44
PTCH1-210ENST00000468211 KIF1CO43896 1103 aaKnown RBP24.06■■□□□ 1.44
PTCH1-210ENST00000468211 UGT1A9O60656 530 aa24.06■■□□□ 1.44
PTCH1-210ENST00000468211 WISP1O95388 367 aa24.06■■□□□ 1.44
PTCH1-210ENST00000468211 DLGAP3O95886 979 aa24.06■■□□□ 1.44
PTCH1-210ENST00000468211 ZNF28P17035 718 aa24.06■■□□□ 1.44
PTCH1-210ENST00000468211 UGT1A6P19224 532 aa24.06■■□□□ 1.44
PTCH1-210ENST00000468211 UGT1A1P22309 533 aa24.06■■□□□ 1.44
PTCH1-210ENST00000468211 UGT1A4P22310 534 aa24.06■■□□□ 1.44
PTCH1-210ENST00000468211 MAP4P27816 1152 aaKnown RBP24.06■■□□□ 1.44
PTCH1-210ENST00000468211 MAGEA1P43355 309 aa24.06■■□□□ 1.44
PTCH1-210ENST00000468211 SH3BP2P78314 561 aa24.06■■□□□ 1.44
PTCH1-210ENST00000468211 CHRNA6Q15825 494 aa24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms