RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 ZNF395Q9H8N7 513 aaPredicted RBP10.08□□□□□ -0.8
MSH5-213ENST00000468136 MEAF6Q9HAF1 191 aa10.08□□□□□ -0.8
MSH5-213ENST00000468136 SLC40A1Q9NP59 571 aa10.08□□□□□ -0.8
MSH5-213ENST00000468136 PCDH12Q9NPG4 1184 aa10.08□□□□□ -0.8
MSH5-213ENST00000468136 TMEM45AQ9NWC5 275 aa10.08□□□□□ -0.8
MSH5-213ENST00000468136 THAP10Q9P2Z0 257 aaPredicted RBP10.08□□□□□ -0.8
MSH5-213ENST00000468136 ZDHHC2Q9UIJ5 367 aa10.08□□□□□ -0.8
MSH5-213ENST00000468136 MYO7AQ13402 2215 aa10.07□□□□□ -0.8
MSH5-213ENST00000468136 ZNF106Q9H2Y7 1883 aaKnown RBP10.07□□□□□ -0.8
MSH5-213ENST00000468136 TBC1D3BA6NDS4 549 aa10.07□□□□□ -0.8
MSH5-213ENST00000468136 PABPN1LA6NDY0 278 aaKnown RBP10.07□□□□□ -0.8
MSH5-213ENST00000468136 BTN3A1O00481 513 aa10.07□□□□□ -0.8
MSH5-213ENST00000468136 GYG2O15488 501 aa10.07□□□□□ -0.8
MSH5-213ENST00000468136 GRID2O43424 1007 aa10.07□□□□□ -0.8
MSH5-213ENST00000468136 MGRN1O60291 552 aa10.07□□□□□ -0.8
MSH5-213ENST00000468136 OR1I1O60431 355 aa10.07□□□□□ -0.8
MSH5-213ENST00000468136 RNASEH1O60930 286 aaKnown RBP10.07□□□□□ -0.8
MSH5-213ENST00000468136 NIPSNAP2O75323 286 aa10.07□□□□□ -0.8
MSH5-213ENST00000468136 SLC25A14O95258 325 aaPredicted RBP10.07□□□□□ -0.8
MSH5-213ENST00000468136 C8GP07360 202 aa10.07□□□□□ -0.8
MSH5-213ENST00000468136 CHRNGP07510 517 aa10.07□□□□□ -0.8
MSH5-213ENST00000468136 RPS17P08708 135 aaKnown RBP10.07□□□□□ -0.8
MSH5-213ENST00000468136 F7P08709 466 aaPredicted RBP10.07□□□□□ -0.8
MSH5-213ENST00000468136 C1SP09871 688 aa10.07□□□□□ -0.8
MSH5-213ENST00000468136 THRAP10827 490 aa10.07□□□□□ -0.8
MSH5-213ENST00000468136 MTHFD2P13995 350 aa10.07□□□□□ -0.8
MSH5-213ENST00000468136 HNRNPLP14866 589 aaKnown RBP eCLIP10.07□□□□□ -0.81e-10■□□□□ 10.9
MSH5-213ENST00000468136 ARSAP15289 507 aa10.07□□□□□ -0.8
MSH5-213ENST00000468136 VCLP18206 1134 aa10.07□□□□□ -0.8
MSH5-213ENST00000468136 LHCGRP22888 699 aa10.07□□□□□ -0.8
MSH5-213ENST00000468136 MPSTP25325 297 aa10.07□□□□□ -0.8
MSH5-213ENST00000468136 TARSP26639 723 aaKnown RBP10.07□□□□□ -0.8
MSH5-213ENST00000468136 ARRB2P32121 409 aa10.07□□□□□ -0.8
MSH5-213ENST00000468136 GKP32189 559 aa10.07□□□□□ -0.8
MSH5-213ENST00000468136 MMP12P39900 470 aa10.07□□□□□ -0.8
MSH5-213ENST00000468136 TNFRSF4P43489 277 aa10.07□□□□□ -0.8
MSH5-213ENST00000468136 CDKN1CP49918 316 aaPredicted RBP10.07□□□□□ -0.8
MSH5-213ENST00000468136 PLOD1Q02809 727 aaPredicted RBP10.07□□□□□ -0.8
MSH5-213ENST00000468136 HYAL1Q12794 435 aa10.07□□□□□ -0.8
MSH5-213ENST00000468136 PCBP2Q15366 365 aaKnown RBP eCLIP10.07□□□□□ -0.8
MSH5-213ENST00000468136 OR4D1Q15615 310 aa10.07□□□□□ -0.8
MSH5-213ENST00000468136 SPRED3Q2MJR0 410 aa10.07□□□□□ -0.8
MSH5-213ENST00000468136 ITPRIPL2Q3MIP1 535 aa10.07□□□□□ -0.8
MSH5-213ENST00000468136 UNC50Q53HI1 259 aa10.07□□□□□ -0.8
MSH5-213ENST00000468136 TCEAL5Q5H9L2 206 aa10.07□□□□□ -0.8
MSH5-213ENST00000468136 SULT1C3Q6IMI6 304 aa10.07□□□□□ -0.8
MSH5-213ENST00000468136 VITQ6UXI7 678 aa10.07□□□□□ -0.8
MSH5-213ENST00000468136 TSPAN33Q86UF1 283 aa10.07□□□□□ -0.8
MSH5-213ENST00000468136 ALYREFQ86V81 257 aaKnown RBP10.07□□□□□ -0.8
MSH5-213ENST00000468136 SPATA6LQ8N4H0 392 aa10.07□□□□□ -0.8
MSH5-213ENST00000468136 SIDT2Q8NBJ9 832 aaKnown RBP10.07□□□□□ -0.8
MSH5-213ENST00000468136 PDPRQ8NCN5 879 aa10.07□□□□□ -0.8
MSH5-213ENST00000468136 GPR26Q8NDV2 337 aa10.07□□□□□ -0.8
MSH5-213ENST00000468136 DDHD1Q8NEL9 900 aa10.07□□□□□ -0.8
MSH5-213ENST00000468136 OR56A4Q8NGH8 313 aa10.07□□□□□ -0.8
MSH5-213ENST00000468136 RP9Q8TA86 221 aaKnown RBP10.07□□□□□ -0.8
MSH5-213ENST00000468136 CYB5D2Q8WUJ1 264 aa10.07□□□□□ -0.8
MSH5-213ENST00000468136 SLC7A6OSQ96CW6 309 aaPredicted RBP10.07□□□□□ -0.8
MSH5-213ENST00000468136 PHF21BQ96EK2 531 aa10.07□□□□□ -0.8
MSH5-213ENST00000468136 SGF29Q96ES7 293 aa10.07□□□□□ -0.8
MSH5-213ENST00000468136 ZNF514Q96K75 400 aaPredicted RBP10.07□□□□□ -0.8
MSH5-213ENST00000468136 SPATA16Q9BXB7 569 aa10.07□□□□□ -0.8
MSH5-213ENST00000468136 HDAC8Q9BY41 377 aa10.07□□□□□ -0.8
MSH5-213ENST00000468136 TMEM245Q9H330 911 aa10.07□□□□□ -0.8
MSH5-213ENST00000468136 IGFLR1Q9H665 355 aa10.07□□□□□ -0.8
MSH5-213ENST00000468136 CERS4Q9HA82 394 aa10.07□□□□□ -0.8
MSH5-213ENST00000468136 HPS4Q9NQG7 708 aa10.07□□□□□ -0.8
MSH5-213ENST00000468136 GTSE1Q9NYZ3 720 aa10.07□□□□□ -0.8
MSH5-213ENST00000468136 PPM1HQ9ULR3 514 aa10.07□□□□□ -0.8
MSH5-213ENST00000468136 TRAF6Q9Y4K3 522 aa10.07□□□□□ -0.8
MSH5-213ENST00000468136 OARD1Q9Y530 152 aa10.07□□□□□ -0.8
MSH5-213ENST00000468136 DOCK6Q96HP0 2047 aa10.07□□□□□ -0.8
MSH5-213ENST00000468136 KLHL33A6NCF5 533 aa10.06□□□□□ -0.8
MSH5-213ENST00000468136 ANKRD65E5RJM6 399 aa10.06□□□□□ -0.8
MSH5-213ENST00000468136 UBXN8O00124 270 aa10.06□□□□□ -0.8
MSH5-213ENST00000468136 WNT9AO14904 365 aa10.06□□□□□ -0.8
MSH5-213ENST00000468136 AZIN1O14977 448 aa10.06□□□□□ -0.8
MSH5-213ENST00000468136 NUAK1O60285 661 aa10.06□□□□□ -0.8
MSH5-213ENST00000468136 CBX6O95503 412 aa10.06□□□□□ -0.8
MSH5-213ENST00000468136 LMNAP02545 664 aaKnown RBP10.06□□□□□ -0.8
MSH5-213ENST00000468136 ELFN1P0C7U0 828 aa10.06□□□□□ -0.8
MSH5-213ENST00000468136 PRSS56P0CW18 603 aa10.06□□□□□ -0.8
MSH5-213ENST00000468136 LAMP2P13473 410 aa10.06□□□□□ -0.8
MSH5-213ENST00000468136 ATP1B2P14415 290 aaPredicted RBP10.06□□□□□ -0.8
MSH5-213ENST00000468136 MSH3P20585 1137 aa10.06□□□□□ -0.8
MSH5-213ENST00000468136 GJA4P35212 333 aa10.06□□□□□ -0.8
MSH5-213ENST00000468136 GMPRP36959 345 aa10.06□□□□□ -0.8
MSH5-213ENST00000468136 HNMTP50135 292 aa10.06□□□□□ -0.8
MSH5-213ENST00000468136 COPAP53621 1224 aa10.06□□□□□ -0.8
MSH5-213ENST00000468136 CLCQ05315 142 aa10.06□□□□□ -0.8
MSH5-213ENST00000468136 DPTQ07507 201 aa10.06□□□□□ -0.8
MSH5-213ENST00000468136 SFSWAPQ12872 951 aaKnown RBP10.06□□□□□ -0.8
MSH5-213ENST00000468136 GRIK2Q13002 908 aa10.06□□□□□ -0.8
MSH5-213ENST00000468136 TSNQ15631 228 aaKnown RBP10.06□□□□□ -0.8
MSH5-213ENST00000468136 PFKFB4Q16877 469 aa10.06□□□□□ -0.8
MSH5-213ENST00000468136 GAB4Q2WGN9 574 aa10.06□□□□□ -0.8
MSH5-213ENST00000468136 TTC31Q49AM3 519 aaPredicted RBP10.06□□□□□ -0.8
MSH5-213ENST00000468136 TMEM52BQ4KMG9 183 aa10.06□□□□□ -0.8
MSH5-213ENST00000468136 WASHC2DQ5SRD0 308 aa10.06□□□□□ -0.8
MSH5-213ENST00000468136 C9orf64Q5T6V5 341 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms