RNA–Protein interactions for RNA: ENST00000466159.6

SYNE1-217, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best) BASIC

Gene SYNE1, Length 2,610 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-217ENST00000466159 CEP295NLQ96MC4 621 aa8.85□□□□□ -0.99
SYNE1-217ENST00000466159 UHRF1Q96T88 793 aaPredicted RBP8.85□□□□□ -0.99
SYNE1-217ENST00000466159 PRPF18Q99633 342 aaKnown RBP8.85□□□□□ -0.99
SYNE1-217ENST00000466159 GPR63Q9BZJ6 419 aa8.85□□□□□ -0.99
SYNE1-217ENST00000466159 TM6SF2Q9BZW4 377 aa8.85□□□□□ -0.99
SYNE1-217ENST00000466159 CREBZFQ9NS37 354 aa8.85□□□□□ -0.99
SYNE1-217ENST00000466159 VPS51Q9UID3 782 aa8.85□□□□□ -0.99
SYNE1-217ENST00000466159 A0A1B0GTW7 788 aa8.85□□□□□ -0.99
SYNE1-217ENST00000466159 H7C0S8 307 aa8.85□□□□□ -0.99
SYNE1-217ENST00000466159 PFDN6O15212 129 aa8.85□□□□□ -0.99
SYNE1-217ENST00000466159 AKAP10O43572 662 aa8.85□□□□□ -0.99
SYNE1-217ENST00000466159 FZD6O60353 706 aa8.85□□□□□ -0.99
SYNE1-217ENST00000466159 VPS4BO75351 444 aa8.85□□□□□ -0.99
SYNE1-217ENST00000466159 STAMBPO95630 424 aa8.85□□□□□ -0.99
SYNE1-217ENST00000466159 CLPTM1O96005 669 aa8.85□□□□□ -0.99
SYNE1-217ENST00000466159 SOX11P35716 441 aa8.85□□□□□ -0.99
SYNE1-217ENST00000466159 CSKP41240 450 aa8.85□□□□□ -0.99
SYNE1-217ENST00000466159 PTGER3P43115 390 aa8.85□□□□□ -0.99
SYNE1-217ENST00000466159 HSPA13P48723 471 aa8.85□□□□□ -0.99
SYNE1-217ENST00000466159 XKR7Q5GH72 579 aa8.85□□□□□ -0.99
SYNE1-217ENST00000466159 PAGE3Q5JUK9 113 aa8.85□□□□□ -0.99
SYNE1-217ENST00000466159 GPRIN3Q6ZVF9 776 aa8.85□□□□□ -0.99
SYNE1-217ENST00000466159 DNAJB7Q7Z6W7 309 aaPredicted RBP8.85□□□□□ -0.99
SYNE1-217ENST00000466159 TMEM150AQ86TG1 271 aa8.85□□□□□ -0.99
SYNE1-217ENST00000466159 CAMK1DQ8IU85 385 aa8.85□□□□□ -0.99
SYNE1-217ENST00000466159 MYO1HQ8N1T3 1032 aa8.85□□□□□ -0.99
SYNE1-217ENST00000466159 OR56A4Q8NGH8 313 aa8.85□□□□□ -0.99
SYNE1-217ENST00000466159 RPL10LQ96L21 214 aaKnown RBP8.85□□□□□ -0.99
SYNE1-217ENST00000466159 ZNF597Q96LX8 424 aa8.85□□□□□ -0.99
SYNE1-217ENST00000466159 HBEGFQ99075 208 aa8.85□□□□□ -0.99
SYNE1-217ENST00000466159 SLC2A11Q9BYW1 496 aa8.85□□□□□ -0.99
SYNE1-217ENST00000466159 P2RY12Q9H244 342 aa8.85□□□□□ -0.99
SYNE1-217ENST00000466159 AIG1Q9NVV5 245 aa8.85□□□□□ -0.99
SYNE1-217ENST00000466159 SLAMF8Q9P0V8 285 aa8.85□□□□□ -0.99
SYNE1-217ENST00000466159 AURKCQ9UQB9 309 aa8.85□□□□□ -0.99
SYNE1-217ENST00000466159 PKP3Q9Y446 797 aa8.85□□□□□ -0.99
SYNE1-217ENST00000466159 ZNF711Q9Y462 761 aa8.85□□□□□ -0.99
SYNE1-217ENST00000466159 ZFC3H1O60293 1989 aaKnown RBP8.85□□□□□ -0.99
SYNE1-217ENST00000466159 PLXNA4Q9HCM2 1894 aa8.85□□□□□ -0.99
SYNE1-217ENST00000466159 A0A1W2PP18 115 aa8.84□□□□□ -0.99
SYNE1-217ENST00000466159 GIPC1O14908 333 aa8.84□□□□□ -0.99
SYNE1-217ENST00000466159 TNFAIP8O95379 198 aa8.84□□□□□ -0.99
SYNE1-217ENST00000466159 CHEK2O96017 543 aa8.84□□□□□ -0.99
SYNE1-217ENST00000466159 ESR1P03372 595 aa8.84□□□□□ -0.99
SYNE1-217ENST00000466159 FAM58BPP0C7Q3 252 aa8.84□□□□□ -0.99
SYNE1-217ENST00000466159 ITGB6P18564 788 aa8.84□□□□□ -0.99
SYNE1-217ENST00000466159 UGT1A6P19224 532 aa8.84□□□□□ -0.99
SYNE1-217ENST00000466159 CD9P21926 228 aa8.84□□□□□ -0.99
SYNE1-217ENST00000466159 GKP32189 559 aa8.84□□□□□ -0.99
SYNE1-217ENST00000466159 ARL1P40616 181 aaPredicted RBP8.84□□□□□ -0.99
SYNE1-217ENST00000466159 CASP2P42575 452 aa8.84□□□□□ -0.99
SYNE1-217ENST00000466159 ATN1P54259 1190 aaPredicted RBP8.84□□□□□ -0.99
SYNE1-217ENST00000466159 KCNK10P57789 538 aa8.84□□□□□ -0.99
SYNE1-217ENST00000466159 ERVPABLB-1P60509 514 aa8.84□□□□□ -0.99
SYNE1-217ENST00000466159 NFYCQ13952 458 aa8.84□□□□□ -0.99
SYNE1-217ENST00000466159 FUT11Q495W5 492 aa8.84□□□□□ -0.99
SYNE1-217ENST00000466159 INO80DQ53TQ3 878 aaPredicted RBP8.84□□□□□ -0.99
SYNE1-217ENST00000466159 RABL3Q5HYI8 236 aa8.84□□□□□ -0.99
SYNE1-217ENST00000466159 LETMD1Q6P1Q0 360 aa8.84□□□□□ -0.99
SYNE1-217ENST00000466159 FAM151BQ6UXP7 276 aa8.84□□□□□ -0.99
SYNE1-217ENST00000466159 SPATA19Q7Z5L4 167 aa8.84□□□□□ -0.99
SYNE1-217ENST00000466159 TMCO2Q7Z6W1 182 aaPredicted RBP8.84□□□□□ -0.99
SYNE1-217ENST00000466159 IFNEQ86WN2 208 aa8.84□□□□□ -0.99
SYNE1-217ENST00000466159 AHI1Q8N157 1196 aa8.84□□□□□ -0.99
SYNE1-217ENST00000466159 METTL25Q8N6Q8 603 aa8.84□□□□□ -0.99
SYNE1-217ENST00000466159 ARL14EPQ8N8R7 260 aaPredicted RBP8.84□□□□□ -0.99
SYNE1-217ENST00000466159 ADAMTS19Q8TE59 1207 aa8.84□□□□□ -0.99
SYNE1-217ENST00000466159 AUTS2Q8WXX7 1259 aa8.84□□□□□ -0.99
SYNE1-217ENST00000466159 ZUFSPQ96AP4 578 aa8.84□□□□□ -0.99
SYNE1-217ENST00000466159 CAPNS2Q96L46 248 aa8.84□□□□□ -0.99
SYNE1-217ENST00000466159 EFHD1Q9BUP0 239 aa8.84□□□□□ -0.99
SYNE1-217ENST00000466159 BOCQ9BWV1 1114 aa8.84□□□□□ -0.99
SYNE1-217ENST00000466159 NUSAP1Q9BXS6 441 aaKnown RBP8.84□□□□□ -0.99
SYNE1-217ENST00000466159 TRIM4Q9C037 500 aa8.84□□□□□ -0.99
SYNE1-217ENST00000466159 GID8Q9NWU2 228 aa8.84□□□□□ -0.99
SYNE1-217ENST00000466159 HACD3Q9P035 362 aa8.84□□□□□ -0.99
SYNE1-217ENST00000466159 RNF11Q9Y3C5 154 aa8.84□□□□□ -0.99
SYNE1-217ENST00000466159 PCDHA9Q9Y5H5 950 aa8.84□□□□□ -0.99
SYNE1-217ENST00000466159 OR51B4Q9Y5P0 310 aa8.84□□□□□ -0.99
SYNE1-217ENST00000466159 SLC30A1Q9Y6M5 507 aa8.84□□□□□ -0.99
SYNE1-217ENST00000466159 FAM149AA5PLN7 773 aa8.84□□□□□ -0.99
SYNE1-217ENST00000466159 SOCS2O14508 198 aa8.84□□□□□ -0.99
SYNE1-217ENST00000466159 SMAD6O43541 496 aaKnown RBP8.84□□□□□ -0.99
SYNE1-217ENST00000466159 TPST1O60507 370 aa8.84□□□□□ -0.99
SYNE1-217ENST00000466159 HSD17B1P14061 328 aa8.84□□□□□ -0.99
SYNE1-217ENST00000466159 PSMC3P17980 439 aa8.84□□□□□ -0.99
SYNE1-217ENST00000466159 NELFEP18615 380 aaKnown RBP8.84□□□□□ -0.99
SYNE1-217ENST00000466159 IL12AP29459 219 aa8.84□□□□□ -0.99
SYNE1-217ENST00000466159 HMGCLP35914 325 aa8.84□□□□□ -0.99
SYNE1-217ENST00000466159 ADARP55265 1226 aaKnown RBP8.84□□□□□ -0.99
SYNE1-217ENST00000466159 PRKCQQ04759 706 aa8.84□□□□□ -0.99
SYNE1-217ENST00000466159 CACNG1Q06432 222 aa8.84□□□□□ -0.99
SYNE1-217ENST00000466159 RCAN2Q14206 197 aa8.84□□□□□ -0.99
SYNE1-217ENST00000466159 PABPC1LQ4VXU2 614 aaKnown RBP8.84□□□□□ -0.99
SYNE1-217ENST00000466159 AARS2Q5JTZ9 985 aaKnown RBP8.84□□□□□ -0.99
SYNE1-217ENST00000466159 HABP4Q5JVS0 413 aaKnown RBP8.84□□□□□ -0.99
SYNE1-217ENST00000466159 SPOUT1Q5T280 376 aaKnown RBP8.84□□□□□ -0.99
SYNE1-217ENST00000466159 TXNDC8Q6A555 127 aa8.84□□□□□ -0.99
SYNE1-217ENST00000466159 PRMT9Q6P2P2 845 aa8.84□□□□□ -0.99
SYNE1-217ENST00000466159 Q6ZSR9 355 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 181 ms