RNA–Protein interactions for RNA: ENST00000466048.6

USP54-210, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 4,674 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-210ENST00000466048 CXorf49A8MYA2 514 aaPredicted RBP7.61□□□□□ -1.19
USP54-210ENST00000466048 SNPHO15079 494 aa7.61□□□□□ -1.19
USP54-210ENST00000466048 RGS5O15539 181 aa7.61□□□□□ -1.19
USP54-210ENST00000466048 SNAP91O60641 907 aa7.61□□□□□ -1.19
USP54-210ENST00000466048 LYNP07948 512 aa7.61□□□□□ -1.19
USP54-210ENST00000466048 CD68P34810 354 aaPredicted RBP7.61□□□□□ -1.19
USP54-210ENST00000466048 USP46P62068 366 aa7.61□□□□□ -1.19
USP54-210ENST00000466048 BMPR2Q13873 1038 aa7.61□□□□□ -1.19
USP54-210ENST00000466048 AGAP9Q5VTM2 703 aa7.61□□□□□ -1.19
USP54-210ENST00000466048 ZNF776Q68DI1 518 aaPredicted RBP7.61□□□□□ -1.19
USP54-210ENST00000466048 FBXL22Q6P050 247 aa7.61□□□□□ -1.19
USP54-210ENST00000466048 ARPINQ7Z6K5 226 aa7.61□□□□□ -1.19
USP54-210ENST00000466048 OR8H2Q8N162 312 aa7.61□□□□□ -1.19
USP54-210ENST00000466048 SELENONQ9NZV5 590 aa7.61□□□□□ -1.19
USP54-210ENST00000466048 PRKAG3Q9UGI9 489 aa7.61□□□□□ -1.19
USP54-210ENST00000466048 ENOPH1Q9UHY7 261 aa7.61□□□□□ -1.19
USP54-210ENST00000466048 PLXNA3P51805 1871 aa7.61□□□□□ -1.19
USP54-210ENST00000466048 MYO16Q9Y6X6 1858 aa7.61□□□□□ -1.19
USP54-210ENST00000466048 A0A087X1B8 175 aa7.6□□□□□ -1.19
USP54-210ENST00000466048 SAGE2PA6NJ88 616 aa7.6□□□□□ -1.19
USP54-210ENST00000466048 TPP1O14773 563 aa7.6□□□□□ -1.19
USP54-210ENST00000466048 B4GALT3O60512 393 aa7.6□□□□□ -1.19
USP54-210ENST00000466048 RFPL1O75677 317 aa7.6□□□□□ -1.19
USP54-210ENST00000466048 CBX6O95503 412 aa7.6□□□□□ -1.19
USP54-210ENST00000466048 EPOP01588 193 aa7.6□□□□□ -1.19
USP54-210ENST00000466048 FTH1P02794 183 aa7.6□□□□□ -1.19
USP54-210ENST00000466048 SERPINE1P05121 402 aa7.6□□□□□ -1.19
USP54-210ENST00000466048 HOXB6P17509 224 aaKnown RBP7.6□□□□□ -1.19
USP54-210ENST00000466048 GRIA1P42261 906 aa7.6□□□□□ -1.19
USP54-210ENST00000466048 WNT3AP56704 352 aa7.6□□□□□ -1.19
USP54-210ENST00000466048 SHHQ15465 462 aa7.6□□□□□ -1.19
USP54-210ENST00000466048 SAMD4BQ5PRF9 694 aaKnown RBP7.6□□□□□ -1.19
USP54-210ENST00000466048 BROXQ5VW32 411 aa7.6□□□□□ -1.19
USP54-210ENST00000466048 TTC23Q5W5X9 447 aa7.6□□□□□ -1.19
USP54-210ENST00000466048 TRMT10BQ6PF06 316 aaKnown RBP7.6□□□□□ -1.19
USP54-210ENST00000466048 ENKURQ8TC29 256 aa7.6□□□□□ -1.19
USP54-210ENST00000466048 SPOCK2Q92563 424 aa7.6□□□□□ -1.19
USP54-210ENST00000466048 OTULINQ96BN8 352 aa7.6□□□□□ -1.19
USP54-210ENST00000466048 HMCESQ96FZ2 354 aa7.6□□□□□ -1.19
USP54-210ENST00000466048 MYRFLQ96LU7 910 aa7.6□□□□□ -1.19
USP54-210ENST00000466048 CRNNQ9UBG3 495 aaPredicted RBP7.6□□□□□ -1.19
USP54-210ENST00000466048 PRPF19Q9UMS4 504 aaKnown RBP7.6□□□□□ -1.19
USP54-210ENST00000466048 AP3M1Q9Y2T2 418 aa7.6□□□□□ -1.19
USP54-210ENST00000466048 TMEM114B3SHH9 223 aa7.6□□□□□ -1.19
USP54-210ENST00000466048 HLA-DQB2P05538 268 aa7.6□□□□□ -1.19
USP54-210ENST00000466048 BPGMP07738 259 aa7.6□□□□□ -1.19
USP54-210ENST00000466048 ERVK-10P10266 1014 aa7.6□□□□□ -1.19
USP54-210ENST00000466048 CPA3P15088 417 aa7.6□□□□□ -1.19
USP54-210ENST00000466048 NUDT1P36639 197 aa7.6□□□□□ -1.19
USP54-210ENST00000466048 CCDC81Q6ZN84 652 aa7.6□□□□□ -1.19
USP54-210ENST00000466048 RD3Q7Z3Z2 195 aa7.6□□□□□ -1.19
USP54-210ENST00000466048 PHACTR4Q8IZ21 702 aa7.6□□□□□ -1.19
USP54-210ENST00000466048 CMTM8Q8IZV2 173 aa7.6□□□□□ -1.19
USP54-210ENST00000466048 TAGAPQ8N103 731 aa7.6□□□□□ -1.19
USP54-210ENST00000466048 IMP4Q96G21 291 aaKnown RBP7.6□□□□□ -1.19
USP54-210ENST00000466048 P2RY13Q9BPV8 354 aa7.6□□□□□ -1.19
USP54-210ENST00000466048 OSBPL6Q9BZF3 934 aa7.6□□□□□ -1.19
USP54-210ENST00000466048 CLK4Q9HAZ1 481 aaKnown RBP7.6□□□□□ -1.19
USP54-210ENST00000466048 RPRD1BQ9NQG5 326 aaKnown RBP7.6□□□□□ -1.19
USP54-210ENST00000466048 SLC17A7Q9P2U7 560 aa7.6□□□□□ -1.19
USP54-210ENST00000466048 RAB26Q9ULW5 256 aa7.6□□□□□ -1.19
USP54-210ENST00000466048 TGM5O43548 720 aa7.6□□□□□ -1.19
USP54-210ENST00000466048 PRAMEF11O60813 436 aa7.6□□□□□ -1.19
USP54-210ENST00000466048 LDLRP01130 860 aa7.6□□□□□ -1.19
USP54-210ENST00000466048 PENKP01210 267 aaPredicted RBP7.6□□□□□ -1.19
USP54-210ENST00000466048 CYP2A7P20853 494 aa7.6□□□□□ -1.19
USP54-210ENST00000466048 PIK3R1P27986 724 aa7.6□□□□□ -1.19
USP54-210ENST00000466048 OXTRP30559 389 aa7.6□□□□□ -1.19
USP54-210ENST00000466048 GPR1P46091 355 aa7.6□□□□□ -1.19
USP54-210ENST00000466048 CD151P48509 253 aa7.6□□□□□ -1.19
USP54-210ENST00000466048 PIK3CGP48736 1102 aa7.6□□□□□ -1.19
USP54-210ENST00000466048 TRAP1Q12931 704 aaKnown RBP7.6□□□□□ -1.19
USP54-210ENST00000466048 SERINC3Q13530 473 aa7.6□□□□□ -1.19
USP54-210ENST00000466048 SUZ12Q15022 739 aaKnown RBP7.6□□□□□ -1.19
USP54-210ENST00000466048 C5orf22Q49AR2 442 aa7.6□□□□□ -1.19
USP54-210ENST00000466048 FAM45BPQ6NSW5 357 aa7.6□□□□□ -1.19
USP54-210ENST00000466048 MZT2BQ6NZ67 158 aa7.6□□□□□ -1.19
USP54-210ENST00000466048 C14orf80Q86SX3 495 aa7.6□□□□□ -1.19
USP54-210ENST00000466048 PLEKHG4BQ96PX9 1271 aa7.6□□□□□ -1.19
USP54-210ENST00000466048 ARNT2Q9HBZ2 717 aa7.6□□□□□ -1.19
USP54-210ENST00000466048 IMPAD1Q9NX62 359 aa7.6□□□□□ -1.19
USP54-210ENST00000466048 CCDC59Q9P031 241 aaKnown RBP7.6□□□□□ -1.19
USP54-210ENST00000466048 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.6□□□□□ -1.19
USP54-210ENST00000466048 RIMKLBQ9ULI2 386 aa7.6□□□□□ -1.19
USP54-210ENST00000466048 SCML1Q9UN30 329 aa7.6□□□□□ -1.19
USP54-210ENST00000466048 DNAJC16Q9Y2G8 782 aa7.6□□□□□ -1.19
USP54-210ENST00000466048 NLRC5Q86WI3 1866 aa7.6□□□□□ -1.19
USP54-210ENST00000466048 TANC1Q9C0D5 1861 aa7.6□□□□□ -1.19
USP54-210ENST00000466048 TBC1D3DA0A087WVF3 549 aa7.6□□□□□ -1.19
USP54-210ENST00000466048 TBC1D3IA0A087WXS9 549 aa7.6□□□□□ -1.19
USP54-210ENST00000466048 TBC1D3EA0A087X179 549 aa7.6□□□□□ -1.19
USP54-210ENST00000466048 TBC1D3KA0A087X1G2 549 aa7.6□□□□□ -1.19
USP54-210ENST00000466048 TBC1D3FA6NER0 549 aaPredicted RBP7.6□□□□□ -1.19
USP54-210ENST00000466048 TBC1D3LB9A6J9 549 aa7.6□□□□□ -1.19
USP54-210ENST00000466048 LAMTOR5O43504 91 aa7.6□□□□□ -1.19
USP54-210ENST00000466048 ELFN1P0C7U0 828 aa7.6□□□□□ -1.19
USP54-210ENST00000466048 TBC1D3HP0C7X1 549 aa7.6□□□□□ -1.19
USP54-210ENST00000466048 MSL3P1P0C860 447 aa7.6□□□□□ -1.19
USP54-210ENST00000466048 LPOP22079 712 aaPredicted RBP7.6□□□□□ -1.19
USP54-210ENST00000466048 GRIA2P42262 883 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 176 ms