RNA–Protein interactions for RNA: ENST00000465892.6

TGFBR3-204, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-204ENST00000465892 FBXO16Q8IX29 292 aaPredicted RBP13.82□□□□□ -0.2
TGFBR3-204ENST00000465892 TTC39CQ8N584 583 aa13.82□□□□□ -0.2
TGFBR3-204ENST00000465892 LEMD2Q8NC56 503 aa13.82□□□□□ -0.2
TGFBR3-204ENST00000465892 GAD1Q99259 594 aa13.82□□□□□ -0.2
TGFBR3-204ENST00000465892 ASPSCR1Q9BZE9 553 aa13.82□□□□□ -0.2
TGFBR3-204ENST00000465892 DSN1Q9H410 356 aa13.82□□□□□ -0.2
TGFBR3-204ENST00000465892 C8orf4Q9NR00 106 aa13.82□□□□□ -0.2
TGFBR3-204ENST00000465892 MARCH4Q9P2E8 410 aaPredicted RBP13.82□□□□□ -0.2
TGFBR3-204ENST00000465892 CACNG4Q9UBN1 327 aa13.82□□□□□ -0.2
TGFBR3-204ENST00000465892 LIMD1Q9UGP4 676 aa13.82□□□□□ -0.2
TGFBR3-204ENST00000465892 ZNF646O15015 1829 aaPredicted RBP13.82□□□□□ -0.2
TGFBR3-204ENST00000465892 EIF3FO00303 357 aaPredicted RBP13.81□□□□□ -0.2
TGFBR3-204ENST00000465892 CYBBP04839 570 aa13.81□□□□□ -0.2
TGFBR3-204ENST00000465892 PAMP19021 973 aa13.81□□□□□ -0.2
TGFBR3-204ENST00000465892 DGKQP52824 942 aa13.81□□□□□ -0.2
TGFBR3-204ENST00000465892 MAXP61244 160 aa13.81□□□□□ -0.2
TGFBR3-204ENST00000465892 ISL1P61371 349 aa13.81□□□□□ -0.2
TGFBR3-204ENST00000465892 OR4D1Q15615 310 aa13.81□□□□□ -0.2
TGFBR3-204ENST00000465892 PLD3Q8IV08 490 aa13.81□□□□□ -0.2
TGFBR3-204ENST00000465892 ATP6V0D2Q8N8Y2 350 aa13.81□□□□□ -0.2
TGFBR3-204ENST00000465892 MINDY2Q8NBR6 621 aa13.81□□□□□ -0.2
TGFBR3-204ENST00000465892 LILRB4Q8NHJ6 448 aa13.81□□□□□ -0.2
TGFBR3-204ENST00000465892 CALML6Q8TD86 181 aa13.81□□□□□ -0.2
TGFBR3-204ENST00000465892 ATL1Q8WXF7 558 aa13.81□□□□□ -0.2
TGFBR3-204ENST00000465892 HSFY1Q96LI6 401 aa13.81□□□□□ -0.2
TGFBR3-204ENST00000465892 WDCPQ9H6R7 721 aa13.81□□□□□ -0.2
TGFBR3-204ENST00000465892 AAR2Q9Y312 384 aaKnown RBP13.81□□□□□ -0.2
TGFBR3-204ENST00000465892 KCTD3Q9Y597 815 aa13.81□□□□□ -0.2
TGFBR3-204ENST00000465892 NCAM2O15394 837 aa13.81□□□□□ -0.2
TGFBR3-204ENST00000465892 SSX4O60224 188 aa13.81□□□□□ -0.2
TGFBR3-204ENST00000465892 SLC22A3O75751 556 aa13.81□□□□□ -0.2
TGFBR3-204ENST00000465892 GABARAPO95166 117 aa13.81□□□□□ -0.2
TGFBR3-204ENST00000465892 SERPINB10P48595 397 aa13.81□□□□□ -0.2
TGFBR3-204ENST00000465892 POLR2JP52435 117 aaKnown RBP13.81□□□□□ -0.2
TGFBR3-204ENST00000465892 RAPSNQ13702 412 aa13.81□□□□□ -0.2
TGFBR3-204ENST00000465892 SYT16Q17RD7 645 aa13.81□□□□□ -0.2
TGFBR3-204ENST00000465892 FAM98BQ52LJ0 330 aaKnown RBP13.81□□□□□ -0.2
TGFBR3-204ENST00000465892 CELF3Q5SZQ8 465 aaKnown RBP13.81□□□□□ -0.2
TGFBR3-204ENST00000465892 SAMD7Q7Z3H4 446 aa13.81□□□□□ -0.2
TGFBR3-204ENST00000465892 CELF2-AS1Q8N7Q2 184 aa13.81□□□□□ -0.2
TGFBR3-204ENST00000465892 MCFD2Q8NI22 146 aa13.81□□□□□ -0.2
TGFBR3-204ENST00000465892 BTN2A3PQ96KV6 586 aa13.81□□□□□ -0.2
TGFBR3-204ENST00000465892 PARVBQ9HBI1 364 aa13.81□□□□□ -0.2
TGFBR3-204ENST00000465892 ZBTB20Q9HC78 741 aaPredicted RBP13.81□□□□□ -0.2
TGFBR3-204ENST00000465892 NDFIP2Q9NV92 336 aa13.81□□□□□ -0.2
TGFBR3-204ENST00000465892 TAF4O00268 1085 aa13.8□□□□□ -0.2
TGFBR3-204ENST00000465892 ENPP3O14638 875 aa13.8□□□□□ -0.2
TGFBR3-204ENST00000465892 GAS2O43903 313 aaKnown RBP13.8□□□□□ -0.2
TGFBR3-204ENST00000465892 TSPAN1O60635 241 aa13.8□□□□□ -0.2
TGFBR3-204ENST00000465892 CCNKO75909 580 aa13.8□□□□□ -0.2
TGFBR3-204ENST00000465892 GSNP06396 782 aa13.8□□□□□ -0.2
TGFBR3-204ENST00000465892 GGT5P36269 586 aa13.8□□□□□ -0.2
TGFBR3-204ENST00000465892 ARSDP51689 593 aa13.8□□□□□ -0.2
TGFBR3-204ENST00000465892 ARPC4P59998 168 aa13.8□□□□□ -0.2
TGFBR3-204ENST00000465892 PHC1P78364 1004 aa13.8□□□□□ -0.2
TGFBR3-204ENST00000465892 NRG1Q02297 640 aaPredicted RBP13.8□□□□□ -0.2
TGFBR3-204ENST00000465892 ITKQ08881 620 aa13.8□□□□□ -0.2
TGFBR3-204ENST00000465892 NPTX1Q15818 432 aa13.8□□□□□ -0.2
TGFBR3-204ENST00000465892 NDUFA5Q16718 116 aa13.8□□□□□ -0.2
TGFBR3-204ENST00000465892 GPRIN1Q7Z2K8 1008 aa13.8□□□□□ -0.2
TGFBR3-204ENST00000465892 SIX5Q8N196 739 aa13.8□□□□□ -0.2
TGFBR3-204ENST00000465892 GOLM1Q8NBJ4 401 aa13.8□□□□□ -0.2
TGFBR3-204ENST00000465892 RHOXF1Q8NHV9 184 aa13.8□□□□□ -0.2
TGFBR3-204ENST00000465892 DYNC2LI1Q8TCX1 351 aa13.8□□□□□ -0.2
TGFBR3-204ENST00000465892 NT5C3BQ969T7 300 aa13.8□□□□□ -0.2
TGFBR3-204ENST00000465892 MYOCQ99972 504 aa13.8□□□□□ -0.2
TGFBR3-204ENST00000465892 CLSTN3Q9BQT9 956 aa13.8□□□□□ -0.2
TGFBR3-204ENST00000465892 PDGFCQ9NRA1 345 aa13.8□□□□□ -0.2
TGFBR3-204ENST00000465892 TREX1Q9NSU2 369 aa13.8□□□□□ -0.2
TGFBR3-204ENST00000465892 DDX28Q9NUL7 540 aaKnown RBP13.8□□□□□ -0.2
TGFBR3-204ENST00000465892 POLR3BQ9NW08 1133 aaPredicted RBP13.8□□□□□ -0.2
TGFBR3-204ENST00000465892 THG1LQ9NWX6 298 aaKnown RBP13.8□□□□□ -0.2
TGFBR3-204ENST00000465892 GPSM3Q9Y4H4 160 aa13.8□□□□□ -0.2
TGFBR3-204ENST00000465892 PRMT5O14744 637 aaPredicted RBP13.8□□□□□ -0.2
TGFBR3-204ENST00000465892 SLC22A1O15245 554 aa13.8□□□□□ -0.2
TGFBR3-204ENST00000465892 C22orf31O95567 290 aa13.8□□□□□ -0.2
TGFBR3-204ENST00000465892 ANGPTL1O95841 491 aa13.8□□□□□ -0.2
TGFBR3-204ENST00000465892 RAP2AP10114 183 aa13.8□□□□□ -0.2
TGFBR3-204ENST00000465892 ITIH1P19827 911 aa13.8□□□□□ -0.2
TGFBR3-204ENST00000465892 ZFP36L2P47974 494 aaKnown RBP13.8□□□□□ -0.2
TGFBR3-204ENST00000465892 PPP5CP53041 499 aa13.8□□□□□ -0.2
TGFBR3-204ENST00000465892 RCAN2Q14206 197 aa13.8□□□□□ -0.2
TGFBR3-204ENST00000465892 FAM209AQ5JX71 171 aa13.8□□□□□ -0.2
TGFBR3-204ENST00000465892 CATSPERGQ6ZRH7 1159 aa13.8□□□□□ -0.2
TGFBR3-204ENST00000465892 LGALS12Q96DT0 336 aa13.8□□□□□ -0.2
TGFBR3-204ENST00000465892 AURKBQ96GD4 344 aaPredicted RBP13.8□□□□□ -0.2
TGFBR3-204ENST00000465892 C17orf80Q9BSJ5 609 aa13.8□□□□□ -0.2
TGFBR3-204ENST00000465892 COLEC11Q9BWP8 271 aa13.8□□□□□ -0.2
TGFBR3-204ENST00000465892 BTBD2Q9BX70 525 aa13.8□□□□□ -0.2
TGFBR3-204ENST00000465892 FBXO8Q9NRD0 319 aa13.8□□□□□ -0.2
TGFBR3-204ENST00000465892 RBM22Q9NW64 420 aaKnown RBP eCLIP13.8□□□□□ -0.23e-7■■■■■ 45.5
TGFBR3-204ENST00000465892 INTS6Q9UL03 887 aaKnown RBP13.8□□□□□ -0.2
TGFBR3-204ENST00000465892 ADAMTS5Q9UNA0 930 aa13.8□□□□□ -0.2
TGFBR3-204ENST00000465892 UGT2A1Q9Y4X1 527 aa13.8□□□□□ -0.2
TGFBR3-204ENST00000465892 MYLKQ15746 1914 aa13.8□□□□□ -0.2
TGFBR3-204ENST00000465892 MTSS1O43312 755 aa13.8□□□□□ -0.2
TGFBR3-204ENST00000465892 PRSS23O95084 383 aa13.8□□□□□ -0.2
TGFBR3-204ENST00000465892 MATN4O95460 622 aa13.8□□□□□ -0.2
TGFBR3-204ENST00000465892 HLA-DQB2P05538 268 aa13.8□□□□□ -0.2
TGFBR3-204ENST00000465892 PFKLP17858 780 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms