RNA–Protein interactions for RNA: ENST00000465312.5

SCAMP3-204, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 715 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-204ENST00000465312 ANKRD20A4Q4UJ75 823 aa18.28■□□□□ 0.52
SCAMP3-204ENST00000465312 MSS51Q4VC12 460 aa18.28■□□□□ 0.52
SCAMP3-204ENST00000465312 GLE1Q53GS7 698 aaKnown RBP18.28■□□□□ 0.52
SCAMP3-204ENST00000465312 PYCR3Q53H96 274 aa18.28■□□□□ 0.52
SCAMP3-204ENST00000465312 SLC25A45Q8N413 288 aa18.28■□□□□ 0.52
SCAMP3-204ENST00000465312 CCL4L1Q8NHW4 92 aa18.28■□□□□ 0.52
SCAMP3-204ENST00000465312 NAT14Q8WUY8 206 aa18.28■□□□□ 0.52
SCAMP3-204ENST00000465312 HEXDCQ8WVB3 486 aa18.28■□□□□ 0.52
SCAMP3-204ENST00000465312 SIGLEC10Q96LC7 697 aa18.28■□□□□ 0.52
SCAMP3-204ENST00000465312 CLPBQ9H078 707 aa18.28■□□□□ 0.52
SCAMP3-204ENST00000465312 DPEP2Q9H4A9 486 aa18.28■□□□□ 0.52
SCAMP3-204ENST00000465312 TREX1Q9NSU2 369 aa18.28■□□□□ 0.52
SCAMP3-204ENST00000465312 IL1RAPL1Q9NZN1 696 aa18.28■□□□□ 0.52
SCAMP3-204ENST00000465312 FAM8A1Q9UBU6 413 aa18.28■□□□□ 0.52
SCAMP3-204ENST00000465312 KCNK6Q9Y257 313 aa18.28■□□□□ 0.52
SCAMP3-204ENST00000465312 DNAJC16Q9Y2G8 782 aa18.28■□□□□ 0.52
SCAMP3-204ENST00000465312 ZNF292O60281 2723 aa18.28■□□□□ 0.52
SCAMP3-204ENST00000465312 PLXNB3Q9ULL4 1909 aa18.27■□□□□ 0.52
SCAMP3-204ENST00000465312 GPR89AB7ZAQ6 455 aa18.27■□□□□ 0.52
SCAMP3-204ENST00000465312 PFDN6O15212 129 aa18.27■□□□□ 0.52
SCAMP3-204ENST00000465312 KMOO15229 486 aa18.27■□□□□ 0.52
SCAMP3-204ENST00000465312 CD3EAPO15446 510 aaKnown RBP18.27■□□□□ 0.52
SCAMP3-204ENST00000465312 SNX2O60749 519 aa18.27■□□□□ 0.52
SCAMP3-204ENST00000465312 DNAJC6O75061 913 aa18.27■□□□□ 0.52
SCAMP3-204ENST00000465312 LDOC1O95751 146 aaPredicted RBP18.27■□□□□ 0.52
SCAMP3-204ENST00000465312 FUCA1P04066 466 aa18.27■□□□□ 0.52
SCAMP3-204ENST00000465312 RHOXF2BP0C7M4 288 aa18.27■□□□□ 0.52
SCAMP3-204ENST00000465312 GPR89BP0CG08 455 aa18.27■□□□□ 0.52
SCAMP3-204ENST00000465312 VCLP18206 1134 aa18.27■□□□□ 0.52
SCAMP3-204ENST00000465312 ELK3P41970 407 aa18.27■□□□□ 0.52
SCAMP3-204ENST00000465312 CTBSQ01459 385 aa18.27■□□□□ 0.52
SCAMP3-204ENST00000465312 ACVR1Q04771 509 aa18.27■□□□□ 0.52
SCAMP3-204ENST00000465312 BIRC2Q13490 618 aa18.27■□□□□ 0.52
SCAMP3-204ENST00000465312 DBN1Q16643 649 aa18.27■□□□□ 0.52
SCAMP3-204ENST00000465312 CCDC157Q569K6 752 aa18.27■□□□□ 0.52
SCAMP3-204ENST00000465312 TEX35Q5T0J7 233 aa18.27■□□□□ 0.52
SCAMP3-204ENST00000465312 LYPLAL1Q5VWZ2 237 aa18.27■□□□□ 0.52
SCAMP3-204ENST00000465312 ARMC3Q5W041 872 aa18.27■□□□□ 0.52
SCAMP3-204ENST00000465312 KIAA0930Q6ICG6 404 aaPredicted RBP18.27■□□□□ 0.52
SCAMP3-204ENST00000465312 MRNIPQ6NTE8 343 aa18.27■□□□□ 0.52
SCAMP3-204ENST00000465312 TMEM220Q6QAJ8 160 aa18.27■□□□□ 0.52
SCAMP3-204ENST00000465312 SDCCAG8Q86SQ7 713 aaPredicted RBP18.27■□□□□ 0.52
SCAMP3-204ENST00000465312 PIANPQ8IYJ0 282 aa18.27■□□□□ 0.52
SCAMP3-204ENST00000465312 ZBED8Q8IZ13 594 aa18.27■□□□□ 0.52
SCAMP3-204ENST00000465312 RASGEF1AQ8N9B8 481 aa18.27■□□□□ 0.52
SCAMP3-204ENST00000465312 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.27■□□□□ 0.52
SCAMP3-204ENST00000465312 FAM46DQ8NEK8 389 aa18.27■□□□□ 0.52
SCAMP3-204ENST00000465312 IFT81Q8WYA0 676 aa18.27■□□□□ 0.52
SCAMP3-204ENST00000465312 GLMNQ92990 594 aa18.27■□□□□ 0.52
SCAMP3-204ENST00000465312 EBNA1BP2Q99848 306 aaKnown RBP18.27■□□□□ 0.52
SCAMP3-204ENST00000465312 RHOXF2Q9BQY4 288 aa18.27■□□□□ 0.52
SCAMP3-204ENST00000465312 RTKNQ9BST9 563 aa18.27■□□□□ 0.52
SCAMP3-204ENST00000465312 DUSP23Q9BVJ7 150 aa18.27■□□□□ 0.52
SCAMP3-204ENST00000465312 SAYSD1Q9NPB0 183 aa18.27■□□□□ 0.52
SCAMP3-204ENST00000465312 PPANQ9NQ55 473 aaKnown RBP18.27■□□□□ 0.52
SCAMP3-204ENST00000465312 FAM114A2Q9NRY5 505 aa18.27■□□□□ 0.52
SCAMP3-204ENST00000465312 C20orf96Q9NUD7 363 aaPredicted RBP18.27■□□□□ 0.52
SCAMP3-204ENST00000465312 TRNAU1APQ9NX07 287 aaKnown RBP18.27■□□□□ 0.52
SCAMP3-204ENST00000465312 NLGN3Q9NZ94 848 aa18.27■□□□□ 0.52
SCAMP3-204ENST00000465312 GRHL1Q9NZI5 618 aa18.27■□□□□ 0.52
SCAMP3-204ENST00000465312 GULP1Q9UBP9 304 aa18.27■□□□□ 0.52
SCAMP3-204ENST00000465312 ZC3H7BQ9UGR2 993 aaKnown RBP18.27■□□□□ 0.52
SCAMP3-204ENST00000465312 GPR34Q9UPC5 381 aa18.27■□□□□ 0.52
SCAMP3-204ENST00000465312 PLEKHM1Q9Y4G2 1056 aa18.27■□□□□ 0.52
SCAMP3-204ENST00000465312 CSNK1G3Q9Y6M4 447 aa18.27■□□□□ 0.52
SCAMP3-204ENST00000465312 LMO7DNF2Z398 122 aa18.26■□□□□ 0.51
SCAMP3-204ENST00000465312 YY2O15391 372 aa18.26■□□□□ 0.51
SCAMP3-204ENST00000465312 NDUFS3O75489 264 aa18.26■□□□□ 0.51
SCAMP3-204ENST00000465312 USP1O94782 785 aa18.26■□□□□ 0.51
SCAMP3-204ENST00000465312 ATP1B2P14415 290 aaPredicted RBP18.26■□□□□ 0.51
SCAMP3-204ENST00000465312 NOVA1P51513 510 aaKnown RBP18.26■□□□□ 0.51
SCAMP3-204ENST00000465312 LONRF1Q17RB8 773 aa18.26■□□□□ 0.51
SCAMP3-204ENST00000465312 CAPN12Q6ZSI9 719 aa18.26■□□□□ 0.51
SCAMP3-204ENST00000465312 LDB1Q86U70 411 aaPredicted RBP18.26■□□□□ 0.51
SCAMP3-204ENST00000465312 AGGF1Q8N302 714 aaeCLIP18.26■□□□□ 0.51
SCAMP3-204ENST00000465312 FBXO36Q8NEA4 188 aa18.26■□□□□ 0.51
SCAMP3-204ENST00000465312 OR4C6Q8NH72 309 aa18.26■□□□□ 0.51
SCAMP3-204ENST00000465312 SGF29Q96ES7 293 aa18.26■□□□□ 0.51
SCAMP3-204ENST00000465312 CNDP2Q96KP4 475 aaKnown RBP18.26■□□□□ 0.51
SCAMP3-204ENST00000465312 FCRL3Q96P31 734 aaPredicted RBP18.26■□□□□ 0.51
SCAMP3-204ENST00000465312 NAT9Q9BTE0 207 aa18.26■□□□□ 0.51
SCAMP3-204ENST00000465312 BOCQ9BWV1 1114 aa18.26■□□□□ 0.51
SCAMP3-204ENST00000465312 KLC4Q9NSK0 619 aa18.26■□□□□ 0.51
SCAMP3-204ENST00000465312 EVA1BQ9NVM1 165 aa18.26■□□□□ 0.51
SCAMP3-204ENST00000465312 PCYT1BQ9Y5K3 369 aaPredicted RBP18.26■□□□□ 0.51
SCAMP3-204ENST00000465312 ASCC3Q8N3C0 2202 aaKnown RBP18.26■□□□□ 0.51
SCAMP3-204ENST00000465312 CABIN1Q9Y6J0 2220 aa18.25■□□□□ 0.51
SCAMP3-204ENST00000465312 UBA6A0AVT1 1052 aaPredicted RBP18.25■□□□□ 0.51
SCAMP3-204ENST00000465312 DCDC2BA2VCK2 349 aa18.25■□□□□ 0.51
SCAMP3-204ENST00000465312 SIGLEC6O43699 453 aa18.25■□□□□ 0.51
SCAMP3-204ENST00000465312 TTC4O95801 387 aa18.25■□□□□ 0.51
SCAMP3-204ENST00000465312 PSMA3P25788 255 aa18.25■□□□□ 0.51
SCAMP3-204ENST00000465312 TTPAP49638 278 aa18.25■□□□□ 0.51
SCAMP3-204ENST00000465312 CTSCP53634 463 aa18.25■□□□□ 0.51
SCAMP3-204ENST00000465312 LRP8Q14114 963 aa18.25■□□□□ 0.51
SCAMP3-204ENST00000465312 ITIH4Q14624 930 aa18.25■□□□□ 0.51
SCAMP3-204ENST00000465312 CRYMQ14894 314 aa18.25■□□□□ 0.51
SCAMP3-204ENST00000465312 TRADDQ15628 312 aa18.25■□□□□ 0.51
SCAMP3-204ENST00000465312 SPANXN3Q5MJ09 141 aa18.25■□□□□ 0.51
SCAMP3-204ENST00000465312 CERS6Q6ZMG9 384 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms