RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 DCUN1D1Q96GG9 259 aa14.32□□□□□ -0.12
SQSTM1-205ENST00000464493 SERPINB12Q96P63 405 aa14.32□□□□□ -0.12
SQSTM1-205ENST00000464493 COPS8Q99627 209 aa14.32□□□□□ -0.12
SQSTM1-205ENST00000464493 KIFC1Q9BW19 673 aa14.32□□□□□ -0.12
SQSTM1-205ENST00000464493 MRM3Q9HC36 420 aaKnown RBP14.32□□□□□ -0.12
SQSTM1-205ENST00000464493 SYBUQ9NX95 663 aa14.32□□□□□ -0.12
SQSTM1-205ENST00000464493 ZFC3H1O60293 1989 aaKnown RBP14.32□□□□□ -0.12
SQSTM1-205ENST00000464493 MAGEB16A2A368 324 aa14.31□□□□□ -0.12
SQSTM1-205ENST00000464493 CPED1A4D0V7 1026 aa14.31□□□□□ -0.12
SQSTM1-205ENST00000464493 EME2A4GXA9 379 aaPredicted RBP14.31□□□□□ -0.12
SQSTM1-205ENST00000464493 OR51F1A6NGY5 319 aa14.31□□□□□ -0.12
SQSTM1-205ENST00000464493 B4DGG1 531 aa14.31□□□□□ -0.12
SQSTM1-205ENST00000464493 NOBOXO60393 691 aa14.31□□□□□ -0.12
SQSTM1-205ENST00000464493 RFPL3O75679 317 aa14.31□□□□□ -0.12
SQSTM1-205ENST00000464493 GOT2P00505 430 aaKnown RBP14.31□□□□□ -0.12
SQSTM1-205ENST00000464493 ADRB1P08588 477 aa14.31□□□□□ -0.12
SQSTM1-205ENST00000464493 PRSS56P0CW18 603 aa14.31□□□□□ -0.12
SQSTM1-205ENST00000464493 RALBP11234 206 aa14.31□□□□□ -0.12
SQSTM1-205ENST00000464493 CDK4P11802 303 aa14.31□□□□□ -0.12
SQSTM1-205ENST00000464493 ZNF7P17097 686 aaPredicted RBP14.31□□□□□ -0.12
SQSTM1-205ENST00000464493 ACRV1P26436 265 aa14.31□□□□□ -0.12
SQSTM1-205ENST00000464493 NMBRP28336 390 aa14.31□□□□□ -0.12
SQSTM1-205ENST00000464493 PRAMEP78395 509 aa14.31□□□□□ -0.12
SQSTM1-205ENST00000464493 CKAP4Q07065 602 aaKnown RBP14.31□□□□□ -0.12
SQSTM1-205ENST00000464493 C2orf54Q08AI8 447 aa14.31□□□□□ -0.12
SQSTM1-205ENST00000464493 INSCQ1MX18 579 aa14.31□□□□□ -0.12
SQSTM1-205ENST00000464493 IZUMO3Q5VZ72 239 aa14.31□□□□□ -0.12
SQSTM1-205ENST00000464493 ARMC3Q5W041 872 aa14.31□□□□□ -0.12
SQSTM1-205ENST00000464493 CASC4Q6P4E1 433 aa14.31□□□□□ -0.12
SQSTM1-205ENST00000464493 AFTPHQ6ULP2 937 aa14.31□□□□□ -0.12
SQSTM1-205ENST00000464493 MICALCLQ6ZW33 695 aa14.31□□□□□ -0.12
SQSTM1-205ENST00000464493 ZNF572Q7Z3I7 529 aaPredicted RBP14.31□□□□□ -0.12
SQSTM1-205ENST00000464493 MAATS1Q7Z4T9 603 aa14.31□□□□□ -0.12
SQSTM1-205ENST00000464493 HOOK3Q86VS8 718 aa14.31□□□□□ -0.12
SQSTM1-205ENST00000464493 SERPINA9Q86WD7 417 aa14.31□□□□□ -0.12
SQSTM1-205ENST00000464493 PIANPQ8IYJ0 282 aa14.31□□□□□ -0.12
SQSTM1-205ENST00000464493 KYQ8NBH2 561 aa14.31□□□□□ -0.12
SQSTM1-205ENST00000464493 OR4L1Q8NH43 312 aa14.31□□□□□ -0.12
SQSTM1-205ENST00000464493 ADAMTS14Q8WXS8 1223 aa14.31□□□□□ -0.12
SQSTM1-205ENST00000464493 SGF29Q96ES7 293 aa14.31□□□□□ -0.12
SQSTM1-205ENST00000464493 ZNF514Q96K75 400 aaPredicted RBP14.31□□□□□ -0.12
SQSTM1-205ENST00000464493 TIMM29Q9BSF4 260 aa14.31□□□□□ -0.12
SQSTM1-205ENST00000464493 TRIM51Q9BSJ1 452 aa14.31□□□□□ -0.12
SQSTM1-205ENST00000464493 KLC4Q9NSK0 619 aa14.31□□□□□ -0.12
SQSTM1-205ENST00000464493 TREX1Q9NSU2 369 aa14.31□□□□□ -0.12
SQSTM1-205ENST00000464493 ZDHHC3Q9NYG2 299 aa14.31□□□□□ -0.12
SQSTM1-205ENST00000464493 SLC23A2Q9UGH3 650 aa14.31□□□□□ -0.12
SQSTM1-205ENST00000464493 PADI4Q9UM07 663 aa14.31□□□□□ -0.12
SQSTM1-205ENST00000464493 SOX13Q9UN79 622 aa14.31□□□□□ -0.12
SQSTM1-205ENST00000464493 KCNK6Q9Y257 313 aa14.31□□□□□ -0.12
SQSTM1-205ENST00000464493 DNMT3AQ9Y6K1 912 aaPredicted RBP14.31□□□□□ -0.12
SQSTM1-205ENST00000464493 OR2AG2A6NM03 316 aa14.3□□□□□ -0.12
SQSTM1-205ENST00000464493 CFAP99D6REC4 459 aa14.3□□□□□ -0.12
SQSTM1-205ENST00000464493 GP1BAP07359 652 aa14.3□□□□□ -0.12
SQSTM1-205ENST00000464493 ATP1B2P14415 290 aaPredicted RBP14.3□□□□□ -0.12
SQSTM1-205ENST00000464493 FOXN2P32314 431 aa14.3□□□□□ -0.12
SQSTM1-205ENST00000464493 CLCNKAP51800 687 aa14.3□□□□□ -0.12
SQSTM1-205ENST00000464493 CTSCP53634 463 aa14.3□□□□□ -0.12
SQSTM1-205ENST00000464493 B4GALNT1Q00973 533 aa14.3□□□□□ -0.12
SQSTM1-205ENST00000464493 WHAMMP3Q1A5X7 153 aa14.3□□□□□ -0.12
SQSTM1-205ENST00000464493 PLA2G4EQ3MJ16 856 aa14.3□□□□□ -0.12
SQSTM1-205ENST00000464493 FNBP1LQ5T0N5 605 aa14.3□□□□□ -0.12
SQSTM1-205ENST00000464493 GUSBP11Q6P575 273 aa14.3□□□□□ -0.12
SQSTM1-205ENST00000464493 CES3Q6UWW8 571 aa14.3□□□□□ -0.12
SQSTM1-205ENST00000464493 DET1Q7L5Y6 550 aa14.3□□□□□ -0.12
SQSTM1-205ENST00000464493 EFL1Q7Z2Z2 1120 aaKnown RBP14.3□□□□□ -0.12
SQSTM1-205ENST00000464493 C11orf96Q7Z7L8 435 aa14.3□□□□□ -0.12
SQSTM1-205ENST00000464493 SFTPA2Q8IWL1 248 aa14.3□□□□□ -0.12
SQSTM1-205ENST00000464493 MPP5Q8N3R9 675 aa14.3□□□□□ -0.12
SQSTM1-205ENST00000464493 OR6C4Q8NGE1 309 aa14.3□□□□□ -0.12
SQSTM1-205ENST00000464493 IFI44Q8TCB0 444 aa14.3□□□□□ -0.12
SQSTM1-205ENST00000464493 NAT6Q93015 286 aa14.3□□□□□ -0.12
SQSTM1-205ENST00000464493 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.3□□□□□ -0.121e-7■■■□□ 14.6
SQSTM1-205ENST00000464493 MFSD3Q96ES6 412 aa14.3□□□□□ -0.12
SQSTM1-205ENST00000464493 SGSM3Q96HU1 749 aa14.3□□□□□ -0.12
SQSTM1-205ENST00000464493 TRIM31Q9BZY9 425 aa14.3□□□□□ -0.12
SQSTM1-205ENST00000464493 SAMD15Q9P1V8 674 aa14.3□□□□□ -0.12
SQSTM1-205ENST00000464493 TBC1D29Q9UFV1 150 aa14.3□□□□□ -0.12
SQSTM1-205ENST00000464493 ASXL3Q9C0F0 2248 aa14.29□□□□□ -0.12
SQSTM1-205ENST00000464493 IGLV3-16A0A075B6K0 115 aa14.29□□□□□ -0.12
SQSTM1-205ENST00000464493 MED19A0JLT2 244 aaPredicted RBP14.29□□□□□ -0.12
SQSTM1-205ENST00000464493 FAM187AA6NFU0 413 aa14.29□□□□□ -0.12
SQSTM1-205ENST00000464493 EFCAB8A8MWE9 144 aa14.29□□□□□ -0.12
SQSTM1-205ENST00000464493 SMAPO00193 183 aa14.29□□□□□ -0.12
SQSTM1-205ENST00000464493 SNX2O60749 519 aa14.29□□□□□ -0.12
SQSTM1-205ENST00000464493 KCNJ13O60928 360 aa14.29□□□□□ -0.12
SQSTM1-205ENST00000464493 POP7O75817 140 aaKnown RBP14.29□□□□□ -0.12
SQSTM1-205ENST00000464493 VCLP18206 1134 aa14.29□□□□□ -0.12
SQSTM1-205ENST00000464493 MAGEA3P43357 314 aa14.29□□□□□ -0.12
SQSTM1-205ENST00000464493 MRPS25P82663 173 aaKnown RBP14.29□□□□□ -0.12
SQSTM1-205ENST00000464493 E2F1Q01094 437 aa14.29□□□□□ -0.12
SQSTM1-205ENST00000464493 FOXC1Q12948 553 aa14.29□□□□□ -0.12
SQSTM1-205ENST00000464493 TUBB2AQ13885 445 aa14.29□□□□□ -0.12
SQSTM1-205ENST00000464493 HLTFQ14527 1009 aaKnown RBP eCLIP14.29□□□□□ -0.12
SQSTM1-205ENST00000464493 MORF4L2Q15014 288 aa14.29□□□□□ -0.12
SQSTM1-205ENST00000464493 DBN1Q16643 649 aa14.29□□□□□ -0.12
SQSTM1-205ENST00000464493 C14orf28Q4W4Y0 310 aa14.29□□□□□ -0.12
SQSTM1-205ENST00000464493 FASTKD1Q53R41 847 aaKnown RBP14.29□□□□□ -0.12
SQSTM1-205ENST00000464493 LYPLAL1Q5VWZ2 237 aa14.29□□□□□ -0.12
SQSTM1-205ENST00000464493 DHRS13Q6UX07 377 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms