RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 CREBBPQ92793 2442 aa17■□□□□ 0.31
HMGN1-210ENST00000464078 CDC14CA4D256 554 aa17■□□□□ 0.31
HMGN1-210ENST00000464078 PDZK1P1A8MUH7 402 aa17■□□□□ 0.31
HMGN1-210ENST00000464078 KMOO15229 486 aa17■□□□□ 0.31
HMGN1-210ENST00000464078 SPAG6O75602 509 aa17■□□□□ 0.31
HMGN1-210ENST00000464078 RASSF9O75901 435 aa17■□□□□ 0.31
HMGN1-210ENST00000464078 CYP1A2P05177 515 aa17■□□□□ 0.31
HMGN1-210ENST00000464078 CCNYL3P0C7X3 344 aa17■□□□□ 0.31
HMGN1-210ENST00000464078 SKILP12757 684 aa17■□□□□ 0.31
HMGN1-210ENST00000464078 BRAFP15056 766 aa17■□□□□ 0.31
HMGN1-210ENST00000464078 ZNF7P17097 686 aaPredicted RBP17■□□□□ 0.31
HMGN1-210ENST00000464078 AMD1P17707 334 aa17■□□□□ 0.31
HMGN1-210ENST00000464078 NELFEP18615 380 aaKnown RBP17■□□□□ 0.31
HMGN1-210ENST00000464078 CD86P42081 329 aa17■□□□□ 0.31
HMGN1-210ENST00000464078 SEMA5AQ13591 1074 aa17■□□□□ 0.31
HMGN1-210ENST00000464078 HADHQ16836 314 aaKnown RBP17■□□□□ 0.31
HMGN1-210ENST00000464078 INSCQ1MX18 579 aa17■□□□□ 0.31
HMGN1-210ENST00000464078 HGSNATQ68CP4 663 aa17■□□□□ 0.31
HMGN1-210ENST00000464078 CRTC3Q6UUV7 619 aa17■□□□□ 0.31
HMGN1-210ENST00000464078 TMEM135Q86UB9 458 aa17■□□□□ 0.31
HMGN1-210ENST00000464078 LRRTM4Q86VH4 590 aa17■□□□□ 0.31
HMGN1-210ENST00000464078 PPP1R3BQ86XI6 285 aa17■□□□□ 0.31
HMGN1-210ENST00000464078 GPR26Q8NDV2 337 aa17■□□□□ 0.31
HMGN1-210ENST00000464078 GLYATL1Q969I3 302 aa17■□□□□ 0.31
HMGN1-210ENST00000464078 ZDHHC12Q96GR4 267 aa17■□□□□ 0.31
HMGN1-210ENST00000464078 BTBD6Q96KE9 485 aa17■□□□□ 0.31
HMGN1-210ENST00000464078 TRIB3Q96RU7 358 aa17■□□□□ 0.31
HMGN1-210ENST00000464078 SPATA16Q9BXB7 569 aa17■□□□□ 0.31
HMGN1-210ENST00000464078 ZFYVE1Q9HBF4 777 aa17■□□□□ 0.31
HMGN1-210ENST00000464078 LHX9Q9NQ69 397 aa17■□□□□ 0.31
HMGN1-210ENST00000464078 SHANK1Q9Y566 2161 aa16.99■□□□□ 0.31
HMGN1-210ENST00000464078 MYO1FO00160 1098 aa16.99■□□□□ 0.31
HMGN1-210ENST00000464078 KIF1CO43896 1103 aaKnown RBP16.99■□□□□ 0.31
HMGN1-210ENST00000464078 VEGFDO43915 354 aa16.99■□□□□ 0.31
HMGN1-210ENST00000464078 KATNA1O75449 491 aa16.99■□□□□ 0.31
HMGN1-210ENST00000464078 PDGFAP04085 211 aa16.99■□□□□ 0.31
HMGN1-210ENST00000464078 CASP14P31944 242 aa16.99■□□□□ 0.31
HMGN1-210ENST00000464078 IFI35P80217 286 aaPredicted RBP16.99■□□□□ 0.31
HMGN1-210ENST00000464078 GBE1Q04446 702 aa16.99■□□□□ 0.31
HMGN1-210ENST00000464078 GPR18Q14330 331 aa16.99■□□□□ 0.31
HMGN1-210ENST00000464078 PDK2Q15119 407 aa16.99■□□□□ 0.31
HMGN1-210ENST00000464078 TDRD12Q587J7 1177 aaKnown RBP16.99■□□□□ 0.31
HMGN1-210ENST00000464078 FIGNQ5HY92 759 aa16.99■□□□□ 0.31
HMGN1-210ENST00000464078 ZNF648Q5T619 568 aaPredicted RBP16.99■□□□□ 0.31
HMGN1-210ENST00000464078 CACHD1Q5VU97 1274 aa16.99■□□□□ 0.31
HMGN1-210ENST00000464078 CAPRIN2Q6IMN6 1127 aaKnown RBP16.99■□□□□ 0.31
HMGN1-210ENST00000464078 ZNF547Q8IVP9 402 aa16.99■□□□□ 0.31
HMGN1-210ENST00000464078 PQLC3Q8N755 202 aa16.99■□□□□ 0.31
HMGN1-210ENST00000464078 CT55Q8WUE5 264 aa16.99■□□□□ 0.31
HMGN1-210ENST00000464078 SLC41A2Q96JW4 573 aa16.99■□□□□ 0.31
HMGN1-210ENST00000464078 BPIFA3Q9BQP9 254 aa16.99■□□□□ 0.31
HMGN1-210ENST00000464078 ACTL8Q9H568 366 aa16.99■□□□□ 0.31
HMGN1-210ENST00000464078 MAGEE1Q9HCI5 957 aa16.99■□□□□ 0.31
HMGN1-210ENST00000464078 ARFGAP3Q9NP61 516 aa16.99■□□□□ 0.31
HMGN1-210ENST00000464078 DTLQ9NZJ0 730 aa16.99■□□□□ 0.31
HMGN1-210ENST00000464078 BZW2Q9Y6E2 419 aaKnown RBP16.99■□□□□ 0.31
HMGN1-210ENST00000464078 ABCA12Q86UK0 2595 aa16.98■□□□□ 0.31
HMGN1-210ENST00000464078 A0A1B0GTH6 734 aa16.98■□□□□ 0.31
HMGN1-210ENST00000464078 PIPSLA2A3N6 862 aa16.98■□□□□ 0.31
HMGN1-210ENST00000464078 VPS4BO75351 444 aa16.98■□□□□ 0.31
HMGN1-210ENST00000464078 UQCRFS1P47985 274 aa16.98■□□□□ 0.31
HMGN1-210ENST00000464078 PPIDQ08752 370 aaKnown RBP16.98■□□□□ 0.31
HMGN1-210ENST00000464078 GALNT3Q14435 633 aa16.98■□□□□ 0.31
HMGN1-210ENST00000464078 ESPL1Q14674 2120 aa16.98■□□□□ 0.31
HMGN1-210ENST00000464078 PLA2G4EQ3MJ16 856 aa16.98■□□□□ 0.31
HMGN1-210ENST00000464078 FILIP1LQ4L180 1135 aa16.98■□□□□ 0.31
HMGN1-210ENST00000464078 ALS2CLQ60I27 953 aa16.98■□□□□ 0.31
HMGN1-210ENST00000464078 TMC3Q7Z5M5 1100 aa16.98■□□□□ 0.31
HMGN1-210ENST00000464078 BPHLQ86WA6 291 aaPredicted RBP16.98■□□□□ 0.31
HMGN1-210ENST00000464078 CNTD1Q8N815 330 aa16.98■□□□□ 0.31
HMGN1-210ENST00000464078 UBXN4Q92575 508 aa16.98■□□□□ 0.31
HMGN1-210ENST00000464078 RNF31Q96EP0 1072 aa16.98■□□□□ 0.31
HMGN1-210ENST00000464078 ELMO2Q96JJ3 720 aa16.98■□□□□ 0.31
HMGN1-210ENST00000464078 GPR87Q9BY21 358 aa16.98■□□□□ 0.31
HMGN1-210ENST00000464078 NAT10Q9H0A0 1025 aaKnown RBP16.98■□□□□ 0.31
HMGN1-210ENST00000464078 PDE7BQ9NP56 450 aa16.98■□□□□ 0.31
HMGN1-210ENST00000464078 MLXIPLQ9NP71 852 aa16.98■□□□□ 0.31
HMGN1-210ENST00000464078 PLEKHB1Q9UF11 243 aaPredicted RBP16.98■□□□□ 0.31
HMGN1-210ENST00000464078 VPS4AQ9UN37 437 aa16.98■□□□□ 0.31
HMGN1-210ENST00000464078 DNAJC16Q9Y2G8 782 aa16.98■□□□□ 0.31
HMGN1-210ENST00000464078 PCDHGA9Q9Y5G4 932 aaKnown RBP16.98■□□□□ 0.31
HMGN1-210ENST00000464078 LRBAP50851 2863 aa16.97■□□□□ 0.31
HMGN1-210ENST00000464078 OR52A4PA6NMU1 304 aa16.97■□□□□ 0.31
HMGN1-210ENST00000464078 KCNK1O00180 336 aa16.97■□□□□ 0.31
HMGN1-210ENST00000464078 DNAJB5O75953 348 aa16.97■□□□□ 0.31
HMGN1-210ENST00000464078 TIAF1O95411 115 aa16.97■□□□□ 0.31
HMGN1-210ENST00000464078 JCHAINP01591 159 aa16.97■□□□□ 0.31
HMGN1-210ENST00000464078 IDSP22304 550 aa16.97■□□□□ 0.31
HMGN1-210ENST00000464078 TYRO3Q06418 890 aa16.97■□□□□ 0.31
HMGN1-210ENST00000464078 SLC10A2Q12908 348 aaPredicted RBP16.97■□□□□ 0.31
HMGN1-210ENST00000464078 ZBTB17Q13105 803 aa16.97■□□□□ 0.31
HMGN1-210ENST00000464078 TUBB3Q13509 450 aa16.97■□□□□ 0.31
HMGN1-210ENST00000464078 LAMB3Q13751 1172 aa16.97■□□□□ 0.31
HMGN1-210ENST00000464078 SLC14A2Q15849 920 aa16.97■□□□□ 0.31
HMGN1-210ENST00000464078 SEPT7Q16181 437 aaKnown RBP16.97■□□□□ 0.31
HMGN1-210ENST00000464078 UGT8Q16880 541 aa16.97■□□□□ 0.31
HMGN1-210ENST00000464078 ATP13A4Q4VNC1 1196 aa16.97■□□□□ 0.31
HMGN1-210ENST00000464078 PAPD7Q5XG87 772 aaKnown RBP16.97■□□□□ 0.31
HMGN1-210ENST00000464078 IRGCQ6NXR0 463 aa16.97■□□□□ 0.31
HMGN1-210ENST00000464078 FAM92BQ6ZTR7 304 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms