RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 SLC5A6Q9Y289 635 aa14.23□□□□□ -0.13
SMC1A-204ENST00000463684 DNAJC16Q9Y2G8 782 aa14.23□□□□□ -0.13
SMC1A-204ENST00000463684 TTLL3Q9Y4R7 772 aa14.23□□□□□ -0.13
SMC1A-204ENST00000463684 CELSR2Q9HCU4 2923 aa14.22□□□□□ -0.13
SMC1A-204ENST00000463684 LDLRP01130 860 aa14.22□□□□□ -0.13
SMC1A-204ENST00000463684 PRLP01236 227 aa14.22□□□□□ -0.13
SMC1A-204ENST00000463684 FOLR1P15328 257 aa14.22□□□□□ -0.13
SMC1A-204ENST00000463684 ZNF7P17097 686 aaPredicted RBP14.22□□□□□ -0.13
SMC1A-204ENST00000463684 LPOP22079 712 aaPredicted RBP14.22□□□□□ -0.13
SMC1A-204ENST00000463684 IDSP22304 550 aa14.22□□□□□ -0.13
SMC1A-204ENST00000463684 RPL10P27635 214 aaKnown RBP14.22□□□□□ -0.13
SMC1A-204ENST00000463684 ZNF165P49910 485 aa14.22□□□□□ -0.13
SMC1A-204ENST00000463684 DSC2Q02487 901 aa14.22□□□□□ -0.13
SMC1A-204ENST00000463684 UBXN1Q04323 297 aa14.22□□□□□ -0.13
SMC1A-204ENST00000463684 IL10RAQ13651 578 aa14.22□□□□□ -0.13
SMC1A-204ENST00000463684 GPR18Q14330 331 aa14.22□□□□□ -0.13
SMC1A-204ENST00000463684 PLA2G4EQ3MJ16 856 aa14.22□□□□□ -0.13
SMC1A-204ENST00000463684 ZNF569Q5MCW4 686 aa14.22□□□□□ -0.13
SMC1A-204ENST00000463684 ZNF648Q5T619 568 aaPredicted RBP14.22□□□□□ -0.13
SMC1A-204ENST00000463684 CDKAL1Q5VV42 579 aa14.22□□□□□ -0.13
SMC1A-204ENST00000463684 ABRAXAS1Q6UWZ7 409 aa14.22□□□□□ -0.13
SMC1A-204ENST00000463684 SRRM1Q8IYB3 904 aaKnown RBP14.22□□□□□ -0.13
SMC1A-204ENST00000463684 ANKRD20A12PQ8NF67 263 aa14.22□□□□□ -0.13
SMC1A-204ENST00000463684 MR1Q95460 341 aa14.22□□□□□ -0.13
SMC1A-204ENST00000463684 PNPLA2Q96AD5 504 aa14.22□□□□□ -0.13
SMC1A-204ENST00000463684 C5orf34Q96MH7 638 aa14.22□□□□□ -0.13
SMC1A-204ENST00000463684 PHF12Q96QT6 1004 aa14.22□□□□□ -0.13
SMC1A-204ENST00000463684 MLPHQ9BV36 600 aaPredicted RBP14.22□□□□□ -0.13
SMC1A-204ENST00000463684 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.22□□□□□ -0.13
SMC1A-204ENST00000463684 RBM22Q9NW64 420 aaKnown RBP eCLIP14.22□□□□□ -0.13
SMC1A-204ENST00000463684 SLC23A2Q9UGH3 650 aa14.22□□□□□ -0.13
SMC1A-204ENST00000463684 ADGRG1Q9Y653 693 aa14.22□□□□□ -0.13
SMC1A-204ENST00000463684 SCINQ9Y6U3 715 aa14.22□□□□□ -0.13
SMC1A-204ENST00000463684 IGHV5-51A0A0C4DH38 117 aa14.21□□□□□ -0.13
SMC1A-204ENST00000463684 SSU72P8A0A1W2PR75 194 aa14.21□□□□□ -0.13
SMC1A-204ENST00000463684 CHUKO15111 745 aa14.21□□□□□ -0.13
SMC1A-204ENST00000463684 MATN3O15232 486 aa14.21□□□□□ -0.13
SMC1A-204ENST00000463684 CEACAM4O75871 244 aa14.21□□□□□ -0.13
SMC1A-204ENST00000463684 ELAVL4P26378 380 aaKnown RBP14.21□□□□□ -0.13
SMC1A-204ENST00000463684 IL1R2P27930 398 aa14.21□□□□□ -0.13
SMC1A-204ENST00000463684 PTGIRP43119 386 aa14.21□□□□□ -0.13
SMC1A-204ENST00000463684 KCNAB1Q14722 419 aa14.21□□□□□ -0.13
SMC1A-204ENST00000463684 NR6A1Q15406 480 aa14.21□□□□□ -0.13
SMC1A-204ENST00000463684 CCDC122Q5T0U0 273 aa14.21□□□□□ -0.13
SMC1A-204ENST00000463684 SLC6A19Q695T7 634 aa14.21□□□□□ -0.13
SMC1A-204ENST00000463684 ALG1LQ6GMV1 187 aa14.21□□□□□ -0.13
SMC1A-204ENST00000463684 TIGD7Q6NT04 549 aaPredicted RBP14.21□□□□□ -0.13
SMC1A-204ENST00000463684 KLHL35Q6PF15 583 aa14.21□□□□□ -0.13
SMC1A-204ENST00000463684 ADGRG6Q86SQ4 1221 aa14.21□□□□□ -0.13
SMC1A-204ENST00000463684 LRRTM4Q86VH4 590 aa14.21□□□□□ -0.13
SMC1A-204ENST00000463684 Q8NA96 180 aa14.21□□□□□ -0.13
SMC1A-204ENST00000463684 TCTN2Q96GX1 697 aa14.21□□□□□ -0.13
SMC1A-204ENST00000463684 SLC41A2Q96JW4 573 aa14.21□□□□□ -0.13
SMC1A-204ENST00000463684 ZNF514Q96K75 400 aaPredicted RBP14.21□□□□□ -0.13
SMC1A-204ENST00000463684 TIMM29Q9BSF4 260 aa14.21□□□□□ -0.13
SMC1A-204ENST00000463684 MRPL47Q9HD33 250 aaKnown RBP14.21□□□□□ -0.13
SMC1A-204ENST00000463684 WASH6PQ9NQA3 447 aa14.21□□□□□ -0.13
SMC1A-204ENST00000463684 FGF21Q9NSA1 209 aa14.21□□□□□ -0.13
SMC1A-204ENST00000463684 AMACRQ9UHK6 382 aa14.21□□□□□ -0.13
SMC1A-204ENST00000463684 SRPK3Q9UPE1 567 aa14.21□□□□□ -0.13
SMC1A-204ENST00000463684 A6NL46 340 aa14.2□□□□□ -0.14
SMC1A-204ENST00000463684 OR52A4PA6NMU1 304 aa14.2□□□□□ -0.14
SMC1A-204ENST00000463684 ANKRD66B4E2M5 251 aa14.2□□□□□ -0.14
SMC1A-204ENST00000463684 ZNF185O15231 689 aa14.2□□□□□ -0.14
SMC1A-204ENST00000463684 CPNE3O75131 537 aaKnown RBP14.2□□□□□ -0.14
SMC1A-204ENST00000463684 TMEM63AO94886 807 aa14.2□□□□□ -0.14
SMC1A-204ENST00000463684 FTLP02792 175 aaPredicted RBP14.2□□□□□ -0.14
SMC1A-204ENST00000463684 KLK3P07288 261 aaPredicted RBP14.2□□□□□ -0.14
SMC1A-204ENST00000463684 RARAP10276 462 aa14.2□□□□□ -0.14
SMC1A-204ENST00000463684 VCLP18206 1134 aa14.2□□□□□ -0.14
SMC1A-204ENST00000463684 HALP42357 657 aa14.2□□□□□ -0.14
SMC1A-204ENST00000463684 DRG2P55039 364 aaKnown RBP14.2□□□□□ -0.14
SMC1A-204ENST00000463684 ELOAQ14241 798 aaKnown RBP14.2□□□□□ -0.14
SMC1A-204ENST00000463684 IHHQ14623 411 aa14.2□□□□□ -0.14
SMC1A-204ENST00000463684 AGAP9Q5VTM2 703 aa14.2□□□□□ -0.14
SMC1A-204ENST00000463684 IZUMO3Q5VZ72 239 aa14.2□□□□□ -0.14
SMC1A-204ENST00000463684 WASH2PQ6VEQ5 465 aa14.2□□□□□ -0.14
SMC1A-204ENST00000463684 IRF2BP2Q7Z5L9 587 aa14.2□□□□□ -0.14
SMC1A-204ENST00000463684 KMT5CQ86Y97 462 aa14.2□□□□□ -0.14
SMC1A-204ENST00000463684 TMEM126BQ8IUX1 230 aa14.2□□□□□ -0.14
SMC1A-204ENST00000463684 TTC13Q8NBP0 860 aa14.2□□□□□ -0.14
SMC1A-204ENST00000463684 FDCSPQ8NFU4 85 aa14.2□□□□□ -0.14
SMC1A-204ENST00000463684 ZSCAN5AQ9BUG6 496 aa14.2□□□□□ -0.14
SMC1A-204ENST00000463684 ADGRE3Q9BY15 652 aa14.2□□□□□ -0.14
SMC1A-204ENST00000463684 RAD18Q9NS91 495 aa14.2□□□□□ -0.14
SMC1A-204ENST00000463684 FANCLQ9NW38 375 aa14.2□□□□□ -0.14
SMC1A-204ENST00000463684 SEMA5BQ9P283 1151 aa14.2□□□□□ -0.14
SMC1A-204ENST00000463684 TRIM10Q9UDY6 481 aa14.2□□□□□ -0.14
SMC1A-204ENST00000463684 SNX7Q9UNH6 387 aa14.2□□□□□ -0.14
SMC1A-204ENST00000463684 CRYBG3Q68DQ2 2970 aa14.2□□□□□ -0.14
SMC1A-204ENST00000463684 CENPEQ02224 2701 aa14.19□□□□□ -0.14
SMC1A-204ENST00000463684 UBA6A0AVT1 1052 aaPredicted RBP14.19□□□□□ -0.14
SMC1A-204ENST00000463684 LGALS16A8MUM7 142 aa14.19□□□□□ -0.14
SMC1A-204ENST00000463684 KRT86O43790 486 aa14.19□□□□□ -0.14
SMC1A-204ENST00000463684 VEGFDO43915 354 aa14.19□□□□□ -0.14
SMC1A-204ENST00000463684 SCRG1O75711 98 aa14.19□□□□□ -0.14
SMC1A-204ENST00000463684 CDK14O94921 469 aa14.19□□□□□ -0.14
SMC1A-204ENST00000463684 CBX6O95503 412 aa14.19□□□□□ -0.14
SMC1A-204ENST00000463684 JCHAINP01591 159 aa14.19□□□□□ -0.14
SMC1A-204ENST00000463684 EBLN1P0CF75 366 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms