RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 CACNA2D3Q8IZS8 1091 aa7.85□□□□□ -1.15
CDC42BPA-210ENST00000462553 IL22RA1Q8N6P7 574 aa7.85□□□□□ -1.15
CDC42BPA-210ENST00000462553 AGBL5Q8NDL9 886 aa7.85□□□□□ -1.15
CDC42BPA-210ENST00000462553 ANKK1Q8NFD2 765 aa7.85□□□□□ -1.15
CDC42BPA-210ENST00000462553 SPATA22Q8NHS9 363 aa7.85□□□□□ -1.15
CDC42BPA-210ENST00000462553 SLC37A2Q8TED4 501 aa7.85□□□□□ -1.15
CDC42BPA-210ENST00000462553 TFB1MQ8WVM0 346 aaKnown RBP7.85□□□□□ -1.15
CDC42BPA-210ENST00000462553 ZDHHC16Q969W1 377 aa7.85□□□□□ -1.15
CDC42BPA-210ENST00000462553 RTP4Q96DX8 246 aa7.85□□□□□ -1.15
CDC42BPA-210ENST00000462553 TEKT5Q96M29 485 aa7.85□□□□□ -1.15
CDC42BPA-210ENST00000462553 AGAP3Q96P47 875 aa7.85□□□□□ -1.15
CDC42BPA-210ENST00000462553 OR2M4Q96R27 311 aa7.85□□□□□ -1.15
CDC42BPA-210ENST00000462553 LYSMD1Q96S90 227 aa7.85□□□□□ -1.15
CDC42BPA-210ENST00000462553 GORASP1Q9BQQ3 440 aa7.85□□□□□ -1.15
CDC42BPA-210ENST00000462553 SLC25A51Q9H1U9 297 aa7.85□□□□□ -1.15
CDC42BPA-210ENST00000462553 C10orf88Q9H8K7 445 aa7.85□□□□□ -1.15
CDC42BPA-210ENST00000462553 GLOD4Q9HC38 313 aa7.85□□□□□ -1.15
CDC42BPA-210ENST00000462553 AKAP7Q9P0M2 348 aaPredicted RBP7.85□□□□□ -1.15
CDC42BPA-210ENST00000462553 ANKMY1Q9P2S6 941 aa7.85□□□□□ -1.15
CDC42BPA-210ENST00000462553 CD84Q9UIB8 345 aa7.85□□□□□ -1.15
CDC42BPA-210ENST00000462553 TUBD1Q9UJT1 453 aa7.85□□□□□ -1.15
CDC42BPA-210ENST00000462553 PILRAQ9UKJ1 303 aa7.85□□□□□ -1.15
CDC42BPA-210ENST00000462553 AMFRQ9UKV5 643 aa7.85□□□□□ -1.15
CDC42BPA-210ENST00000462553 EFR3BQ9Y2G0 817 aa7.85□□□□□ -1.15
CDC42BPA-210ENST00000462553 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.85□□□□□ -1.15
CDC42BPA-210ENST00000462553 ESPL1Q14674 2120 aa7.85□□□□□ -1.15
CDC42BPA-210ENST00000462553 FER1L5A0AVI2 2057 aa7.84□□□□□ -1.15
CDC42BPA-210ENST00000462553 LOC101059948A0A1B0GTJ6 334 aa7.84□□□□□ -1.15
CDC42BPA-210ENST00000462553 TCRBV7S2A1N4TA0A589 114 aa7.84□□□□□ -1.15
CDC42BPA-210ENST00000462553 A6NCN8 305 aa7.84□□□□□ -1.15
CDC42BPA-210ENST00000462553 EFCAB7A8K855 629 aa7.84□□□□□ -1.15
CDC42BPA-210ENST00000462553 MIF4GDA9UHW6 222 aaKnown RBP7.84□□□□□ -1.15
CDC42BPA-210ENST00000462553 HACD1B0YJ81 288 aa7.84□□□□□ -1.15
CDC42BPA-210ENST00000462553 NKX2-8O15522 239 aa7.84□□□□□ -1.15
CDC42BPA-210ENST00000462553 MT-CYBP00156 380 aaPredicted RBP7.84□□□□□ -1.15
CDC42BPA-210ENST00000462553 CYP2A6P11509 494 aaPredicted RBP7.84□□□□□ -1.15
CDC42BPA-210ENST00000462553 NFKB1P19838 968 aa7.84□□□□□ -1.15
CDC42BPA-210ENST00000462553 CES1P23141 567 aa7.84□□□□□ -1.15
CDC42BPA-210ENST00000462553 RBL1P28749 1068 aa7.84□□□□□ -1.15
CDC42BPA-210ENST00000462553 OAS2P29728 719 aaKnown RBP7.84□□□□□ -1.15
CDC42BPA-210ENST00000462553 CSTF2P33240 577 aaKnown RBP eCLIP7.84□□□□□ -1.15
CDC42BPA-210ENST00000462553 ACTR1BP42025 376 aa7.84□□□□□ -1.15
CDC42BPA-210ENST00000462553 STC1P52823 247 aa7.84□□□□□ -1.15
CDC42BPA-210ENST00000462553 ACTR1AP61163 376 aa7.84□□□□□ -1.15
CDC42BPA-210ENST00000462553 GPLD1P80108 840 aa7.84□□□□□ -1.15
CDC42BPA-210ENST00000462553 CDC20Q12834 499 aa7.84□□□□□ -1.15
CDC42BPA-210ENST00000462553 XRCC4Q13426 336 aa7.84□□□□□ -1.15
CDC42BPA-210ENST00000462553 GALNT3Q14435 633 aa7.84□□□□□ -1.15
CDC42BPA-210ENST00000462553 SLC14A2Q15849 920 aa7.84□□□□□ -1.15
CDC42BPA-210ENST00000462553 PYCR3Q53H96 274 aa7.84□□□□□ -1.15
CDC42BPA-210ENST00000462553 LRRC66Q68CR7 880 aa7.84□□□□□ -1.15
CDC42BPA-210ENST00000462553 TMEM71Q6P5X7 295 aa7.84□□□□□ -1.15
CDC42BPA-210ENST00000462553 ADAMTSL4Q6UY14 1074 aa7.84□□□□□ -1.15
CDC42BPA-210ENST00000462553 TIPARPQ7Z3E1 657 aaKnown RBP7.84□□□□□ -1.15
CDC42BPA-210ENST00000462553 PEX26Q7Z412 305 aa7.84□□□□□ -1.15
CDC42BPA-210ENST00000462553 ZC3H18Q86VM9 953 aaKnown RBP7.84□□□□□ -1.15
CDC42BPA-210ENST00000462553 ZNF567Q8N184 647 aa7.84□□□□□ -1.15
CDC42BPA-210ENST00000462553 TXLNBQ8N3L3 684 aa7.84□□□□□ -1.15
CDC42BPA-210ENST00000462553 SFRP1Q8N474 314 aa7.84□□□□□ -1.15
CDC42BPA-210ENST00000462553 RNF10Q8N5U6 811 aaKnown RBP7.84□□□□□ -1.15
CDC42BPA-210ENST00000462553 LPCAT1Q8NF37 534 aa7.84□□□□□ -1.15
CDC42BPA-210ENST00000462553 ACTL9Q8TC94 416 aa7.84□□□□□ -1.15
CDC42BPA-210ENST00000462553 P3H4Q92791 437 aa7.84□□□□□ -1.15
CDC42BPA-210ENST00000462553 SCAMP4Q969E2 229 aa7.84□□□□□ -1.15
CDC42BPA-210ENST00000462553 OXNAD1Q96HP4 312 aaPredicted RBP7.84□□□□□ -1.15
CDC42BPA-210ENST00000462553 COX14Q96I36 57 aa7.84□□□□□ -1.15
CDC42BPA-210ENST00000462553 SLC45A3Q96JT2 553 aa7.84□□□□□ -1.15
CDC42BPA-210ENST00000462553 WDR24Q96S15 920 aa7.84□□□□□ -1.15
CDC42BPA-210ENST00000462553 AGAP2Q99490 1192 aa7.84□□□□□ -1.15
CDC42BPA-210ENST00000462553 FAM118BQ9BPY3 351 aa7.84□□□□□ -1.15
CDC42BPA-210ENST00000462553 TSGA10Q9BZW7 698 aa7.84□□□□□ -1.15
CDC42BPA-210ENST00000462553 ABCG8Q9H221 673 aa7.84□□□□□ -1.15
CDC42BPA-210ENST00000462553 PCDH9Q9HC56 1237 aa7.84□□□□□ -1.15
CDC42BPA-210ENST00000462553 KCTD5Q9NXV2 234 aa7.84□□□□□ -1.15
CDC42BPA-210ENST00000462553 SLC39A1Q9NY26 324 aa7.84□□□□□ -1.15
CDC42BPA-210ENST00000462553 KCNK4Q9NYG8 393 aa7.84□□□□□ -1.15
CDC42BPA-210ENST00000462553 GUCA1BQ9UMX6 200 aa7.84□□□□□ -1.15
CDC42BPA-210ENST00000462553 R3HDM2Q9Y2K5 976 aaKnown RBP7.84□□□□□ -1.15
CDC42BPA-210ENST00000462553 TMEM98Q9Y2Y6 226 aa7.84□□□□□ -1.15
CDC42BPA-210ENST00000462553 CSMD1Q96PZ7 3565 aa7.84□□□□□ -1.15
CDC42BPA-210ENST00000462553 ABCA12Q86UK0 2595 aa7.84□□□□□ -1.15
CDC42BPA-210ENST00000462553 SEC16AO15027 2179 aa7.84□□□□□ -1.15
CDC42BPA-210ENST00000462553 CACNA1DQ01668 2161 aa7.83□□□□□ -1.16
CDC42BPA-210ENST00000462553 GOLGA6CA6NDK9 693 aa7.83□□□□□ -1.16
CDC42BPA-210ENST00000462553 GOLGA6BA6NDN3 693 aa7.83□□□□□ -1.16
CDC42BPA-210ENST00000462553 ZNF891A8MT65 544 aaPredicted RBP7.83□□□□□ -1.16
CDC42BPA-210ENST00000462553 F5H423 210 aaPredicted RBP7.83□□□□□ -1.16
CDC42BPA-210ENST00000462553 DNAJC6O75061 913 aa7.83□□□□□ -1.16
CDC42BPA-210ENST00000462553 DLGAP3O95886 979 aa7.83□□□□□ -1.16
CDC42BPA-210ENST00000462553 GOLGA6DP0CG33 693 aa7.83□□□□□ -1.16
CDC42BPA-210ENST00000462553 CASRP41180 1078 aa7.83□□□□□ -1.16
CDC42BPA-210ENST00000462553 GPR1P46091 355 aa7.83□□□□□ -1.16
CDC42BPA-210ENST00000462553 CCR10P46092 362 aa7.83□□□□□ -1.16
CDC42BPA-210ENST00000462553 RAB15P59190 212 aa7.83□□□□□ -1.16
CDC42BPA-210ENST00000462553 RPL26P61254 145 aaKnown RBP7.83□□□□□ -1.16
CDC42BPA-210ENST00000462553 PTSQ03393 145 aa7.83□□□□□ -1.16
CDC42BPA-210ENST00000462553 IGFBP7Q16270 282 aa7.83□□□□□ -1.16
CDC42BPA-210ENST00000462553 DCAF12Q5T6F0 453 aa7.83□□□□□ -1.16
CDC42BPA-210ENST00000462553 ATP1A1-AS1Q5TC04 95 aa7.83□□□□□ -1.16
CDC42BPA-210ENST00000462553 BZW1Q7L1Q6 419 aaKnown RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms