RNA–Protein interactions for RNA: ENST00000462475.1

COL7A1-204, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 305 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-204ENST00000462475 APOL1O14791 398 aa15.85■□□□□ 0.13
COL7A1-204ENST00000462475 AURKAO14965 403 aa15.85■□□□□ 0.13
COL7A1-204ENST00000462475 UBXN7O94888 489 aa15.85■□□□□ 0.13
COL7A1-204ENST00000462475 MT-CYBP00156 380 aaPredicted RBP15.85■□□□□ 0.13
COL7A1-204ENST00000462475 VIPP01282 170 aa15.85■□□□□ 0.13
COL7A1-204ENST00000462475 TMEM253P0C7T8 217 aa15.85■□□□□ 0.13
COL7A1-204ENST00000462475 BRAFP15056 766 aa15.85■□□□□ 0.13
COL7A1-204ENST00000462475 ZNF7P17097 686 aaPredicted RBP15.85■□□□□ 0.13
COL7A1-204ENST00000462475 F8A1P23610 371 aa15.85■□□□□ 0.13
COL7A1-204ENST00000462475 LEPRP48357 1165 aaKnown RBP15.85■□□□□ 0.13
COL7A1-204ENST00000462475 SEPHS1P49903 392 aa15.85■□□□□ 0.13
COL7A1-204ENST00000462475 SH3BP2P78314 561 aa15.85■□□□□ 0.13
COL7A1-204ENST00000462475 CDK18Q07002 472 aa15.85■□□□□ 0.13
COL7A1-204ENST00000462475 FOXM1Q08050 763 aa15.85■□□□□ 0.13
COL7A1-204ENST00000462475 PDK1Q15118 436 aa15.85■□□□□ 0.13
COL7A1-204ENST00000462475 DEFB109BQ30KR1 87 aa15.85■□□□□ 0.13
COL7A1-204ENST00000462475 PDPK2PQ6A1A2 396 aa15.85■□□□□ 0.13
COL7A1-204ENST00000462475 LRRTM4Q86VH4 590 aa15.85■□□□□ 0.13
COL7A1-204ENST00000462475 ESX1Q8N693 406 aa15.85■□□□□ 0.13
COL7A1-204ENST00000462475 C9orf43Q8TAL5 461 aaPredicted RBP15.85■□□□□ 0.13
COL7A1-204ENST00000462475 RSC1A1Q92681 617 aa15.85■□□□□ 0.13
COL7A1-204ENST00000462475 TIMM29Q9BSF4 260 aa15.85■□□□□ 0.13
COL7A1-204ENST00000462475 ULBP3Q9BZM4 244 aa15.85■□□□□ 0.13
COL7A1-204ENST00000462475 TRIT1Q9H3H1 467 aaKnown RBP15.85■□□□□ 0.13
COL7A1-204ENST00000462475 ZNF71Q9NQZ8 489 aaPredicted RBP15.85■□□□□ 0.13
COL7A1-204ENST00000462475 RAD18Q9NS91 495 aa15.85■□□□□ 0.13
COL7A1-204ENST00000462475 RPS6KL1Q9Y6S9 549 aa15.85■□□□□ 0.13
COL7A1-204ENST00000462475 NAV2Q8IVL1 2488 aa15.85■□□□□ 0.13
COL7A1-204ENST00000462475 OR52A4PA6NMU1 304 aa15.84■□□□□ 0.13
COL7A1-204ENST00000462475 PPP1R12AO14974 1030 aaPredicted RBP15.84■□□□□ 0.13
COL7A1-204ENST00000462475 KMOO15229 486 aa15.84■□□□□ 0.13
COL7A1-204ENST00000462475 KRT1P04264 644 aa15.84■□□□□ 0.13
COL7A1-204ENST00000462475 RPL10P27635 214 aaKnown RBP15.84■□□□□ 0.13
COL7A1-204ENST00000462475 NOP2P46087 812 aaKnown RBP15.84■□□□□ 0.13
COL7A1-204ENST00000462475 DYNLT1P63172 113 aa15.84■□□□□ 0.13
COL7A1-204ENST00000462475 MAP7Q14244 749 aa15.84■□□□□ 0.13
COL7A1-204ENST00000462475 SLC14A2Q15849 920 aa15.84■□□□□ 0.13
COL7A1-204ENST00000462475 C16orf46Q6P387 395 aa15.84■□□□□ 0.13
COL7A1-204ENST00000462475 RFX6Q8HWS3 928 aa15.84■□□□□ 0.13
COL7A1-204ENST00000462475 SLC35G2Q8TBE7 412 aa15.84■□□□□ 0.13
COL7A1-204ENST00000462475 XPO4Q9C0E2 1151 aaKnown RBP15.84■□□□□ 0.13
COL7A1-204ENST00000462475 DEF6Q9H4E7 631 aa15.84■□□□□ 0.13
COL7A1-204ENST00000462475 GLOD4Q9HC38 313 aa15.84■□□□□ 0.13
COL7A1-204ENST00000462475 BPIFA1Q9NP55 256 aa15.84■□□□□ 0.13
COL7A1-204ENST00000462475 UBP1Q9NZI7 540 aa15.84■□□□□ 0.13
COL7A1-204ENST00000462475 KIF1CO43896 1103 aaKnown RBP15.83■□□□□ 0.12
COL7A1-204ENST00000462475 VEGFDO43915 354 aa15.83■□□□□ 0.12
COL7A1-204ENST00000462475 PMPCBO75439 489 aa15.83■□□□□ 0.12
COL7A1-204ENST00000462475 CDK14O94921 469 aa15.83■□□□□ 0.12
COL7A1-204ENST00000462475 NDST3O95803 873 aa15.83■□□□□ 0.12
COL7A1-204ENST00000462475 AMD1P17707 334 aa15.83■□□□□ 0.12
COL7A1-204ENST00000462475 TCN2P20062 427 aa15.83■□□□□ 0.12
COL7A1-204ENST00000462475 CAPZBP47756 277 aa15.83■□□□□ 0.12
COL7A1-204ENST00000462475 DRG2P55039 364 aaKnown RBP15.83■□□□□ 0.12
COL7A1-204ENST00000462475 MC1RQ01726 317 aa15.83■□□□□ 0.12
COL7A1-204ENST00000462475 NOMO1Q15155 1222 aa15.83■□□□□ 0.12
COL7A1-204ENST00000462475 ATP13A5Q4VNC0 1218 aa15.83■□□□□ 0.12
COL7A1-204ENST00000462475 COLEC12Q5KU26 742 aa15.83■□□□□ 0.12
COL7A1-204ENST00000462475 ABRAXAS1Q6UWZ7 409 aa15.83■□□□□ 0.12
COL7A1-204ENST00000462475 C11orf96Q7Z7L8 435 aa15.83■□□□□ 0.12
COL7A1-204ENST00000462475 VSIG1Q86XK7 387 aa15.83■□□□□ 0.12
COL7A1-204ENST00000462475 APOBEC4Q8WW27 367 aaKnown RBP15.83■□□□□ 0.12
COL7A1-204ENST00000462475 RNF25Q96BH1 459 aaPredicted RBP15.83■□□□□ 0.12
COL7A1-204ENST00000462475 ELMO2Q96JJ3 720 aa15.83■□□□□ 0.12
COL7A1-204ENST00000462475 OR6C1Q96RD1 312 aa15.83■□□□□ 0.12
COL7A1-204ENST00000462475 DNAJC7Q99615 494 aa15.83■□□□□ 0.12
COL7A1-204ENST00000462475 MAK16Q9BXY0 300 aaKnown RBP15.83■□□□□ 0.12
COL7A1-204ENST00000462475 ZNF768Q9H5H4 540 aaKnown RBP15.83■□□□□ 0.12
COL7A1-204ENST00000462475 POT1Q9NUX5 634 aa15.83■□□□□ 0.12
COL7A1-204ENST00000462475 TRIM10Q9UDY6 481 aa15.83■□□□□ 0.12
COL7A1-204ENST00000462475 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.83■□□□□ 0.12
COL7A1-204ENST00000462475 SSU72P8A0A1W2PR75 194 aa15.82■□□□□ 0.12
COL7A1-204ENST00000462475 TOX3O15405 576 aaPredicted RBP15.82■□□□□ 0.12
COL7A1-204ENST00000462475 AKR1B10O60218 316 aa15.82■□□□□ 0.12
COL7A1-204ENST00000462475 RASSF9O75901 435 aa15.82■□□□□ 0.12
COL7A1-204ENST00000462475 ZFXP17010 805 aaPredicted RBP15.82■□□□□ 0.12
COL7A1-204ENST00000462475 PTPN3P26045 913 aa15.82■□□□□ 0.12
COL7A1-204ENST00000462475 CASRP41180 1078 aa15.82■□□□□ 0.12
COL7A1-204ENST00000462475 GPR18Q14330 331 aa15.82■□□□□ 0.12
COL7A1-204ENST00000462475 TEX44Q53QW1 395 aa15.82■□□□□ 0.12
COL7A1-204ENST00000462475 AGAP9Q5VTM2 703 aa15.82■□□□□ 0.12
COL7A1-204ENST00000462475 PRSS42Q7Z5A4 293 aa15.82■□□□□ 0.12
COL7A1-204ENST00000462475 TRAPPC5Q8IUR0 188 aa15.82■□□□□ 0.12
COL7A1-204ENST00000462475 GALNT6Q8NCL4 622 aa15.82■□□□□ 0.12
COL7A1-204ENST00000462475 ABHD17AQ96GS6 310 aa15.82■□□□□ 0.12
COL7A1-204ENST00000462475 VPS35Q96QK1 796 aa15.82■□□□□ 0.12
COL7A1-204ENST00000462475 SLC40A1Q9NP59 571 aa15.82■□□□□ 0.12
COL7A1-204ENST00000462475 SPTLC3Q9NUV7 552 aa15.82■□□□□ 0.12
COL7A1-204ENST00000462475 ANAPC2Q9UJX6 822 aa15.82■□□□□ 0.12
COL7A1-204ENST00000462475 CROTQ9UKG9 612 aa15.82■□□□□ 0.12
COL7A1-204ENST00000462475 WDR37Q9Y2I8 494 aa15.82■□□□□ 0.12
COL7A1-204ENST00000462475 HYOU1Q9Y4L1 999 aa15.82■□□□□ 0.12
COL7A1-204ENST00000462475 A0A0A6YYK5 440 aaPredicted RBP15.81■□□□□ 0.12
COL7A1-204ENST00000462475 GPR39O43194 453 aa15.81■□□□□ 0.12
COL7A1-204ENST00000462475 KIAA0754O94854 1291 aa15.81■□□□□ 0.12
COL7A1-204ENST00000462475 NDUFA10O95299 355 aa15.81■□□□□ 0.12
COL7A1-204ENST00000462475 TNNT1P13805 278 aa15.81■□□□□ 0.12
COL7A1-204ENST00000462475 IDSP22304 550 aa15.81■□□□□ 0.12
COL7A1-204ENST00000462475 CD68P34810 354 aaPredicted RBP15.81■□□□□ 0.12
COL7A1-204ENST00000462475 DLSTP36957 453 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms