RNA–Protein interactions for RNA: ENST00000462335.1

PKP4-208, Transcript of plakophilin 4, humanhuman

TSL 4

Gene PKP4, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-208ENST00000462335 BBOF1Q8ND07 529 aa9.45□□□□□ -0.9
PKP4-208ENST00000462335 OR4L1Q8NH43 312 aa9.45□□□□□ -0.9
PKP4-208ENST00000462335 CCL4L1Q8NHW4 92 aa9.45□□□□□ -0.9
PKP4-208ENST00000462335 GSDMBQ8TAX9 411 aa9.45□□□□□ -0.9
PKP4-208ENST00000462335 ADAMTS14Q8WXS8 1223 aa9.45□□□□□ -0.9
PKP4-208ENST00000462335 HDAC10Q969S8 669 aa9.45□□□□□ -0.9
PKP4-208ENST00000462335 RANBP9Q96S59 729 aa9.45□□□□□ -0.9
PKP4-208ENST00000462335 KRT12Q99456 494 aa9.45□□□□□ -0.9
PKP4-208ENST00000462335 SLC38A3Q99624 504 aa9.45□□□□□ -0.9
PKP4-208ENST00000462335 BOCQ9BWV1 1114 aa9.45□□□□□ -0.9
PKP4-208ENST00000462335 ZDHHC3Q9NYG2 299 aa9.45□□□□□ -0.9
PKP4-208ENST00000462335 AKAP7Q9P0M2 348 aaPredicted RBP9.45□□□□□ -0.9
PKP4-208ENST00000462335 LRIT1Q9P2V4 623 aa9.45□□□□□ -0.9
PKP4-208ENST00000462335 FAM8A1Q9UBU6 413 aa9.45□□□□□ -0.9
PKP4-208ENST00000462335 PCYOX1Q9UHG3 505 aa9.45□□□□□ -0.9
PKP4-208ENST00000462335 TCAF1Q9Y4C2 921 aa9.45□□□□□ -0.9
PKP4-208ENST00000462335 DNMT3AQ9Y6K1 912 aaPredicted RBP9.45□□□□□ -0.9
PKP4-208ENST00000462335 MED19A0JLT2 244 aaPredicted RBP9.44□□□□□ -0.9
PKP4-208ENST00000462335 CCDC162PA2VCL2 907 aa9.44□□□□□ -0.9
PKP4-208ENST00000462335 MROH6A6NGR9 719 aa9.44□□□□□ -0.9
PKP4-208ENST00000462335 QSOX1O00391 747 aa9.44□□□□□ -0.9
PKP4-208ENST00000462335 NDUFS3O75489 264 aa9.44□□□□□ -0.9
PKP4-208ENST00000462335 VIPP01282 170 aa9.44□□□□□ -0.9
PKP4-208ENST00000462335 ATP1B2P14415 290 aaPredicted RBP9.44□□□□□ -0.9
PKP4-208ENST00000462335 GRIA1P42261 906 aa9.44□□□□□ -0.9
PKP4-208ENST00000462335 ACADVLP49748 655 aa9.44□□□□□ -0.9
PKP4-208ENST00000462335 CALCOCO2Q13137 446 aa9.44□□□□□ -0.9
PKP4-208ENST00000462335 TUBB2AQ13885 445 aa9.44□□□□□ -0.9
PKP4-208ENST00000462335 SEPT7Q16181 437 aaKnown RBP9.44□□□□□ -0.9
PKP4-208ENST00000462335 AMZ1Q400G9 498 aa9.44□□□□□ -0.9
PKP4-208ENST00000462335 IZUMO3Q5VZ72 239 aa9.44□□□□□ -0.9
PKP4-208ENST00000462335 MRNIPQ6NTE8 343 aa9.44□□□□□ -0.9
PKP4-208ENST00000462335 GUSBP11Q6P575 273 aa9.44□□□□□ -0.9
PKP4-208ENST00000462335 SERPINA9Q86WD7 417 aa9.44□□□□□ -0.9
PKP4-208ENST00000462335 TMPRSS12Q86WS5 348 aa9.44□□□□□ -0.9
PKP4-208ENST00000462335 CREG2Q8IUH2 290 aa9.44□□□□□ -0.9
PKP4-208ENST00000462335 KLHDC8BQ8IXV7 354 aa9.44□□□□□ -0.9
PKP4-208ENST00000462335 CFAP206Q8IYR0 622 aa9.44□□□□□ -0.9
PKP4-208ENST00000462335 PDIK1LQ8N165 341 aa9.44□□□□□ -0.9
PKP4-208ENST00000462335 NXPE1Q8N323 547 aa9.44□□□□□ -0.9
PKP4-208ENST00000462335 RASGEF1AQ8N9B8 481 aa9.44□□□□□ -0.9
PKP4-208ENST00000462335 MCUQ8NE86 351 aa9.44□□□□□ -0.9
PKP4-208ENST00000462335 MNS1Q8NEH6 495 aa9.44□□□□□ -0.9
PKP4-208ENST00000462335 DDHD1Q8NEL9 900 aa9.44□□□□□ -0.9
PKP4-208ENST00000462335 KIF18AQ8NI77 898 aa9.44□□□□□ -0.9
PKP4-208ENST00000462335 BAHD1Q8TBE0 780 aaPredicted RBP9.44□□□□□ -0.9
PKP4-208ENST00000462335 PTCD2Q8WV60 388 aaKnown RBP9.44□□□□□ -0.9
PKP4-208ENST00000462335 CCDC74AQ96AQ1 378 aa9.44□□□□□ -0.9
PKP4-208ENST00000462335 CXorf40BQ96DE9 158 aa9.44□□□□□ -0.9
PKP4-208ENST00000462335 SGF29Q96ES7 293 aa9.44□□□□□ -0.9
PKP4-208ENST00000462335 SCARF2Q96GP6 870 aaPredicted RBP9.44□□□□□ -0.9
PKP4-208ENST00000462335 DEPDC7Q96QD5 511 aa9.44□□□□□ -0.9
PKP4-208ENST00000462335 GFM1Q96RP9 751 aaKnown RBP9.44□□□□□ -0.9
PKP4-208ENST00000462335 CCDC3Q9BQI4 270 aa9.44□□□□□ -0.9
PKP4-208ENST00000462335 TIMM29Q9BSF4 260 aa9.44□□□□□ -0.9
PKP4-208ENST00000462335 TUBB2BQ9BVA1 445 aa9.44□□□□□ -0.9
PKP4-208ENST00000462335 TRIM31Q9BZY9 425 aa9.44□□□□□ -0.9
PKP4-208ENST00000462335 STRADBQ9C0K7 418 aa9.44□□□□□ -0.9
PKP4-208ENST00000462335 CHRAC1Q9NRG0 131 aa9.44□□□□□ -0.9
PKP4-208ENST00000462335 CATSPERZQ9NTU4 200 aa9.44□□□□□ -0.9
PKP4-208ENST00000462335 SPATS2LQ9NUQ6 558 aaKnown RBP9.44□□□□□ -0.9
PKP4-208ENST00000462335 PNMA8BQ9ULN7 279 aaPredicted RBP9.44□□□□□ -0.9
PKP4-208ENST00000462335 CLCA2Q9UQC9 943 aa9.44□□□□□ -0.9
PKP4-208ENST00000462335 UTP11Q9Y3A2 253 aaKnown RBP9.44□□□□□ -0.9
PKP4-208ENST00000462335 PLEKHM1Q9Y4G2 1056 aa9.44□□□□□ -0.9
PKP4-208ENST00000462335 DMXL1Q9Y485 3027 aa9.43□□□□□ -0.9
PKP4-208ENST00000462335 KIR2DS5A0A0G2JLQ3 304 aa9.43□□□□□ -0.9
PKP4-208ENST00000462335 A0A0G2JNG1 304 aa9.43□□□□□ -0.9
PKP4-208ENST00000462335 EME2A4GXA9 379 aaPredicted RBP9.43□□□□□ -0.9
PKP4-208ENST00000462335 EFCAB8A8MWE9 144 aa9.43□□□□□ -0.9
PKP4-208ENST00000462335 TMX2-CTNND1H3BSU7 103 aa9.43□□□□□ -0.9
PKP4-208ENST00000462335 KIR2DS3K7RE56 304 aa9.43□□□□□ -0.9
PKP4-208ENST00000462335 SMAPO00193 183 aa9.43□□□□□ -0.9
PKP4-208ENST00000462335 CD3EAPO15446 510 aaKnown RBP9.43□□□□□ -0.9
PKP4-208ENST00000462335 NUDT21O43809 227 aaKnown RBP9.43□□□□□ -0.9
PKP4-208ENST00000462335 OPA1O60313 960 aa9.43□□□□□ -0.9
PKP4-208ENST00000462335 ABCB7O75027 752 aa9.43□□□□□ -0.9
PKP4-208ENST00000462335 DNAJC6O75061 913 aa9.43□□□□□ -0.9
PKP4-208ENST00000462335 MT-CO3P00414 261 aa9.43□□□□□ -0.9
PKP4-208ENST00000462335 GOT2P00505 430 aaKnown RBP9.43□□□□□ -0.9
PKP4-208ENST00000462335 FTH1P02794 183 aa9.43□□□□□ -0.9
PKP4-208ENST00000462335 FUCA1P04066 466 aa9.43□□□□□ -0.9
PKP4-208ENST00000462335 POLBP06746 335 aa9.43□□□□□ -0.9
PKP4-208ENST00000462335 SLC35G4P0C7Q5 338 aa9.43□□□□□ -0.9
PKP4-208ENST00000462335 OR56A5P0C7T3 313 aa9.43□□□□□ -0.9
PKP4-208ENST00000462335 MLNP12872 115 aa9.43□□□□□ -0.9
PKP4-208ENST00000462335 RPL10P27635 214 aaKnown RBP9.43□□□□□ -0.9
PKP4-208ENST00000462335 NSG1P42857 185 aa9.43□□□□□ -0.9
PKP4-208ENST00000462335 MAPK9P45984 424 aa9.43□□□□□ -0.9
PKP4-208ENST00000462335 TTPAP49638 278 aa9.43□□□□□ -0.9
PKP4-208ENST00000462335 CRADDP78560 199 aa9.43□□□□□ -0.9
PKP4-208ENST00000462335 PTK6Q13882 451 aa9.43□□□□□ -0.9
PKP4-208ENST00000462335 KIR2DS5Q14953 304 aa9.43□□□□□ -0.9
PKP4-208ENST00000462335 SYTL3Q4VX76 610 aa9.43□□□□□ -0.9
PKP4-208ENST00000462335 DNTTIP2Q5QJE6 756 aaKnown RBP9.43□□□□□ -0.9
PKP4-208ENST00000462335 HES3Q5TGS1 186 aa9.43□□□□□ -0.9
PKP4-208ENST00000462335 PTRHD1Q6GMV3 140 aaKnown RBP9.43□□□□□ -0.9
PKP4-208ENST00000462335 OGFOD3Q6PK18 319 aa9.43□□□□□ -0.9
PKP4-208ENST00000462335 RBM44Q6ZP01 1051 aaKnown RBP9.43□□□□□ -0.9
PKP4-208ENST00000462335 NYAP1Q6ZVC0 841 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms