RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 CASC3O15234 703 aaKnown RBP8.75□□□□□ -1.01
LDB1-203ENST00000461873 MAP3K7O43318 606 aa8.75□□□□□ -1.01
LDB1-203ENST00000461873 NDUFA10O95299 355 aa8.75□□□□□ -1.01
LDB1-203ENST00000461873 CRTAMO95727 393 aa8.75□□□□□ -1.01
LDB1-203ENST00000461873 APOC2P02655 101 aa8.75□□□□□ -1.01
LDB1-203ENST00000461873 THRAP10827 490 aa8.75□□□□□ -1.01
LDB1-203ENST00000461873 PYGBP11216 843 aa8.75□□□□□ -1.01
LDB1-203ENST00000461873 ZNF7P17097 686 aaPredicted RBP8.75□□□□□ -1.01
LDB1-203ENST00000461873 BPIP17213 487 aa8.75□□□□□ -1.01
LDB1-203ENST00000461873 HMGCLP35914 325 aa8.75□□□□□ -1.01
LDB1-203ENST00000461873 FOXM1Q08050 763 aa8.75□□□□□ -1.01
LDB1-203ENST00000461873 KIF5AQ12840 1032 aa8.75□□□□□ -1.01
LDB1-203ENST00000461873 TMEM115Q12893 351 aaPredicted RBP8.75□□□□□ -1.01
LDB1-203ENST00000461873 TBX2Q13207 712 aaPredicted RBP8.75□□□□□ -1.01
LDB1-203ENST00000461873 C16orf72Q14CZ0 275 aa8.75□□□□□ -1.01
LDB1-203ENST00000461873 PLCL1Q15111 1095 aa8.75□□□□□ -1.01
LDB1-203ENST00000461873 LONRF2Q1L5Z9 754 aa8.75□□□□□ -1.01
LDB1-203ENST00000461873 KIAA1614Q5VZ46 1190 aa8.75□□□□□ -1.01
LDB1-203ENST00000461873 ARMC6Q6NXE6 501 aa8.75□□□□□ -1.01
LDB1-203ENST00000461873 WDR74Q6RFH5 385 aaPredicted RBP8.75□□□□□ -1.01
LDB1-203ENST00000461873 XKR5Q6UX68 686 aa8.75□□□□□ -1.01
LDB1-203ENST00000461873 FAM151BQ6UXP7 276 aa8.75□□□□□ -1.01
LDB1-203ENST00000461873 PEX26Q7Z412 305 aa8.75□□□□□ -1.01
LDB1-203ENST00000461873 AMZ2Q86W34 360 aa8.75□□□□□ -1.01
LDB1-203ENST00000461873 ZFAND4Q86XD8 727 aa8.75□□□□□ -1.01
LDB1-203ENST00000461873 TC2NQ8N9U0 490 aa8.75□□□□□ -1.01
LDB1-203ENST00000461873 TTC13Q8NBP0 860 aa8.75□□□□□ -1.01
LDB1-203ENST00000461873 GPR26Q8NDV2 337 aa8.75□□□□□ -1.01
LDB1-203ENST00000461873 PTCD2Q8WV60 388 aaKnown RBP8.75□□□□□ -1.01
LDB1-203ENST00000461873 JPH3Q8WXH2 748 aaPredicted RBP8.75□□□□□ -1.01
LDB1-203ENST00000461873 ZDHHC12Q96GR4 267 aa8.75□□□□□ -1.01
LDB1-203ENST00000461873 MRFAP1L1Q96HT8 127 aa8.75□□□□□ -1.01
LDB1-203ENST00000461873 VPS35Q96QK1 796 aa8.75□□□□□ -1.01
LDB1-203ENST00000461873 FCRL5Q96RD9 977 aa8.75□□□□□ -1.01
LDB1-203ENST00000461873 TIMM29Q9BSF4 260 aa8.75□□□□□ -1.01
LDB1-203ENST00000461873 DDA1Q9BW61 102 aa8.75□□□□□ -1.01
LDB1-203ENST00000461873 TRIT1Q9H3H1 467 aaKnown RBP8.75□□□□□ -1.01
LDB1-203ENST00000461873 PRDM8Q9NQV8 689 aa8.75□□□□□ -1.01
LDB1-203ENST00000461873 POT1Q9NUX5 634 aa8.75□□□□□ -1.01
LDB1-203ENST00000461873 TRIM10Q9UDY6 481 aa8.75□□□□□ -1.01
LDB1-203ENST00000461873 TBC1D29Q9UFV1 150 aa8.75□□□□□ -1.01
LDB1-203ENST00000461873 ACSL6Q9UKU0 697 aa8.75□□□□□ -1.01
LDB1-203ENST00000461873 AMFRQ9UKV5 643 aa8.75□□□□□ -1.01
LDB1-203ENST00000461873 OAS3Q9Y6K5 1087 aaKnown RBP8.75□□□□□ -1.01
LDB1-203ENST00000461873 BPTFQ12830 3046 aa8.75□□□□□ -1.01
LDB1-203ENST00000461873 NBEAQ8NFP9 2946 aa8.74□□□□□ -1.01
LDB1-203ENST00000461873 A0A1W2PNU3 283 aaPredicted RBP8.74□□□□□ -1.01
LDB1-203ENST00000461873 PMS2P1A4D2B8 440 aa8.74□□□□□ -1.01
LDB1-203ENST00000461873 B4E171 279 aa8.74□□□□□ -1.01
LDB1-203ENST00000461873 CFAP99D6REC4 459 aa8.74□□□□□ -1.01
LDB1-203ENST00000461873 CAPN5O15484 640 aaPredicted RBP8.74□□□□□ -1.01
LDB1-203ENST00000461873 KCNN4O15554 427 aa8.74□□□□□ -1.01
LDB1-203ENST00000461873 EFSO43281 561 aa8.74□□□□□ -1.01
LDB1-203ENST00000461873 MTX2O75431 263 aa8.74□□□□□ -1.01
LDB1-203ENST00000461873 UBXN7O94888 489 aa8.74□□□□□ -1.01
LDB1-203ENST00000461873 LCA5LO95447 670 aa8.74□□□□□ -1.01
LDB1-203ENST00000461873 PRB1P04280 392 aa8.74□□□□□ -1.01
LDB1-203ENST00000461873 CCL4P13236 92 aa8.74□□□□□ -1.01
LDB1-203ENST00000461873 PECAM1P16284 738 aaPredicted RBP8.74□□□□□ -1.01
LDB1-203ENST00000461873 LPOP22079 712 aaPredicted RBP8.74□□□□□ -1.01
LDB1-203ENST00000461873 RPL10P27635 214 aaKnown RBP8.74□□□□□ -1.01
LDB1-203ENST00000461873 TSPAN7P41732 249 aa8.74□□□□□ -1.01
LDB1-203ENST00000461873 LMAN1P49257 510 aa8.74□□□□□ -1.01
LDB1-203ENST00000461873 CLCNKAP51800 687 aa8.74□□□□□ -1.01
LDB1-203ENST00000461873 EIF3EP60228 445 aaKnown RBP8.74□□□□□ -1.01
LDB1-203ENST00000461873 SQSTM1Q13501 440 aa8.74□□□□□ -1.01
LDB1-203ENST00000461873 TGIF1Q15583 401 aa8.74□□□□□ -1.01
LDB1-203ENST00000461873 SLC1A5Q15758 541 aa8.74□□□□□ -1.01
LDB1-203ENST00000461873 SIRPB2Q5JXA9 342 aa8.74□□□□□ -1.01
LDB1-203ENST00000461873 ZNF648Q5T619 568 aaPredicted RBP8.74□□□□□ -1.01
LDB1-203ENST00000461873 ARHGEF18Q6ZSZ5 1173 aa8.74□□□□□ -1.01
LDB1-203ENST00000461873 BBS12Q6ZW61 710 aa8.74□□□□□ -1.01
LDB1-203ENST00000461873 ADGRG6Q86SQ4 1221 aa8.74□□□□□ -1.01
LDB1-203ENST00000461873 RASGRP3Q8IV61 690 aa8.74□□□□□ -1.01
LDB1-203ENST00000461873 CACNA2D3Q8IZS8 1091 aa8.74□□□□□ -1.01
LDB1-203ENST00000461873 ZNF567Q8N184 647 aa8.74□□□□□ -1.01
LDB1-203ENST00000461873 ZNF514Q96K75 400 aaPredicted RBP8.74□□□□□ -1.01
LDB1-203ENST00000461873 TGM7Q96PF1 710 aa8.74□□□□□ -1.01
LDB1-203ENST00000461873 BBC3Q96PG8 261 aaPredicted RBP8.74□□□□□ -1.01
LDB1-203ENST00000461873 QKIQ96PU8 341 aaKnown RBP eCLIP8.74□□□□□ -1.01
LDB1-203ENST00000461873 TRIB3Q96RU7 358 aa8.74□□□□□ -1.01
LDB1-203ENST00000461873 BAG1Q99933 345 aaPredicted RBP8.74□□□□□ -1.01
LDB1-203ENST00000461873 FICDQ9BVA6 458 aa8.74□□□□□ -1.01
LDB1-203ENST00000461873 OSBPL8Q9BZF1 889 aa8.74□□□□□ -1.01
LDB1-203ENST00000461873 GOLPH3Q9H4A6 298 aa8.74□□□□□ -1.01
LDB1-203ENST00000461873 VPS37BQ9H9H4 285 aa8.74□□□□□ -1.01
LDB1-203ENST00000461873 FOXJ2Q9P0K8 574 aa8.74□□□□□ -1.01
LDB1-203ENST00000461873 NFKBIL1Q9UBC1 381 aaPredicted RBP8.74□□□□□ -1.01
LDB1-203ENST00000461873 CRLS1Q9UJA2 301 aa8.74□□□□□ -1.01
LDB1-203ENST00000461873 CNOT6Q9ULM6 557 aaKnown RBP8.74□□□□□ -1.01
LDB1-203ENST00000461873 EFR3BQ9Y2G0 817 aa8.74□□□□□ -1.01
LDB1-203ENST00000461873 PCDHB3Q9Y5E6 796 aa8.74□□□□□ -1.01
LDB1-203ENST00000461873 PCDHA3Q9Y5H8 950 aa8.74□□□□□ -1.01
LDB1-203ENST00000461873 LOC285095A0A1B0GVY8 99 aa8.73□□□□□ -1.01
LDB1-203ENST00000461873 KLHL33A6NCF5 533 aa8.73□□□□□ -1.01
LDB1-203ENST00000461873 C5orf60A6NFR6 353 aa8.73□□□□□ -1.01
LDB1-203ENST00000461873 LILRA5A6NI73 299 aa8.73□□□□□ -1.01
LDB1-203ENST00000461873 SOWAHDA6NJG2 315 aa8.73□□□□□ -1.01
LDB1-203ENST00000461873 C9orf172C9J069 976 aa8.73□□□□□ -1.01
LDB1-203ENST00000461873 F8W8V4 182 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms