RNA–Protein interactions for RNA: ENST00000461708.1

SSB-206, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-206ENST00000461708 VIPP01282 170 aa17.6■□□□□ 0.41
SSB-206ENST00000461708 KRT1P04264 644 aa17.6■□□□□ 0.41
SSB-206ENST00000461708 PIRTP0C851 137 aa17.6■□□□□ 0.41
SSB-206ENST00000461708 BPIP17213 487 aa17.6■□□□□ 0.41
SSB-206ENST00000461708 CCR10P46092 362 aa17.6■□□□□ 0.41
SSB-206ENST00000461708 TFDP2Q14188 446 aa17.6■□□□□ 0.41
SSB-206ENST00000461708 PCSK7Q16549 785 aa17.6■□□□□ 0.41
SSB-206ENST00000461708 ODF2Q5BJF6 829 aa17.6■□□□□ 0.41
SSB-206ENST00000461708 ZDHHC20Q5W0Z9 365 aa17.6■□□□□ 0.41
SSB-206ENST00000461708 NPNTQ6UXI9 565 aa17.6■□□□□ 0.41
SSB-206ENST00000461708 RFX6Q8HWS3 928 aa17.6■□□□□ 0.41
SSB-206ENST00000461708 VSTM4Q8IW00 320 aa17.6■□□□□ 0.41
SSB-206ENST00000461708 C9orf72Q96LT7 481 aa17.6■□□□□ 0.41
SSB-206ENST00000461708 CHP1Q99653 195 aa17.6■□□□□ 0.41
SSB-206ENST00000461708 TBC1D10AQ9BXI6 508 aa17.6■□□□□ 0.41
SSB-206ENST00000461708 OSGEPL1Q9H4B0 414 aa17.6■□□□□ 0.41
SSB-206ENST00000461708 NHEJ1Q9H9Q4 299 aaPredicted RBP17.6■□□□□ 0.41
SSB-206ENST00000461708 POT1Q9NUX5 634 aa17.6■□□□□ 0.41
SSB-206ENST00000461708 ZNF624Q9P2J8 865 aaPredicted RBP17.6■□□□□ 0.41
SSB-206ENST00000461708 SLC23A2Q9UGH3 650 aa17.6■□□□□ 0.41
SSB-206ENST00000461708 BSNQ9UPA5 3926 aa17.6■□□□□ 0.41
SSB-206ENST00000461708 LOC285095A0A1B0GVY8 99 aa17.59■□□□□ 0.41
SSB-206ENST00000461708 MFAP3LO75121 409 aa17.59■□□□□ 0.41
SSB-206ENST00000461708 STK17BO94768 372 aa17.59■□□□□ 0.41
SSB-206ENST00000461708 UBXN7O94888 489 aa17.59■□□□□ 0.41
SSB-206ENST00000461708 CDK14O94921 469 aa17.59■□□□□ 0.41
SSB-206ENST00000461708 DLGAP3O95886 979 aa17.59■□□□□ 0.41
SSB-206ENST00000461708 MT-CYBP00156 380 aaPredicted RBP17.59■□□□□ 0.41
SSB-206ENST00000461708 PTPN3P26045 913 aa17.59■□□□□ 0.41
SSB-206ENST00000461708 SLC19A1P41440 591 aa17.59■□□□□ 0.41
SSB-206ENST00000461708 MAPK9P45984 424 aa17.59■□□□□ 0.41
SSB-206ENST00000461708 MC1RQ01726 317 aa17.59■□□□□ 0.41
SSB-206ENST00000461708 KCNAB2Q13303 367 aa17.59■□□□□ 0.41
SSB-206ENST00000461708 INSCQ1MX18 579 aa17.59■□□□□ 0.41
SSB-206ENST00000461708 ZNF648Q5T619 568 aaPredicted RBP17.59■□□□□ 0.41
SSB-206ENST00000461708 CRTC3Q6UUV7 619 aa17.59■□□□□ 0.41
SSB-206ENST00000461708 TIPARPQ7Z3E1 657 aaKnown RBP17.59■□□□□ 0.41
SSB-206ENST00000461708 KDELC2Q7Z4H8 507 aa17.59■□□□□ 0.41
SSB-206ENST00000461708 ZNF547Q8IVP9 402 aa17.59■□□□□ 0.41
SSB-206ENST00000461708 SPATA22Q8NHS9 363 aa17.59■□□□□ 0.41
SSB-206ENST00000461708 BRSK1Q8TDC3 778 aa17.59■□□□□ 0.41
SSB-206ENST00000461708 RNF25Q96BH1 459 aaPredicted RBP17.59■□□□□ 0.41
SSB-206ENST00000461708 CTRCQ99895 268 aa17.59■□□□□ 0.41
SSB-206ENST00000461708 ARFGAP3Q9NP61 516 aa17.59■□□□□ 0.41
SSB-206ENST00000461708 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.59■□□□□ 0.41
SSB-206ENST00000461708 OGFRQ9NZT2 677 aa17.59■□□□□ 0.41
SSB-206ENST00000461708 HACD3Q9P035 362 aa17.59■□□□□ 0.41
SSB-206ENST00000461708 SCHIP1Q9P0W5 487 aaPredicted RBP17.59■□□□□ 0.41
SSB-206ENST00000461708 SPO11Q9Y5K1 396 aa17.59■□□□□ 0.41
SSB-206ENST00000461708 PMPCBO75439 489 aa17.58■□□□□ 0.4
SSB-206ENST00000461708 VCLP18206 1134 aa17.58■□□□□ 0.4
SSB-206ENST00000461708 IDSP22304 550 aa17.58■□□□□ 0.4
SSB-206ENST00000461708 CDKN2BP42772 138 aa17.58■□□□□ 0.4
SSB-206ENST00000461708 NOP2P46087 812 aaKnown RBP17.58■□□□□ 0.4
SSB-206ENST00000461708 HADHBP55084 474 aaKnown RBP17.58■□□□□ 0.4
SSB-206ENST00000461708 POLE2P56282 527 aa17.58■□□□□ 0.4
SSB-206ENST00000461708 IL11RAQ14626 422 aa17.58■□□□□ 0.4
SSB-206ENST00000461708 MFSD7Q6UXD7 560 aa17.58■□□□□ 0.4
SSB-206ENST00000461708 C11orf96Q7Z7L8 435 aa17.58■□□□□ 0.4
SSB-206ENST00000461708 TRIM48Q8IWZ4 208 aa17.58■□□□□ 0.4
SSB-206ENST00000461708 ESX1Q8N693 406 aa17.58■□□□□ 0.4
SSB-206ENST00000461708 TFB1MQ8WVM0 346 aaKnown RBP17.58■□□□□ 0.4
SSB-206ENST00000461708 VAT1Q99536 393 aa17.58■□□□□ 0.4
SSB-206ENST00000461708 RAB33BQ9H082 229 aa17.58■□□□□ 0.4
SSB-206ENST00000461708 APMAPQ9HDC9 416 aa17.58■□□□□ 0.4
SSB-206ENST00000461708 SLC40A1Q9NP59 571 aa17.58■□□□□ 0.4
SSB-206ENST00000461708 SPTLC3Q9NUV7 552 aa17.58■□□□□ 0.4
SSB-206ENST00000461708 EPHA6Q9UF33 1036 aa17.58■□□□□ 0.4
SSB-206ENST00000461708 FAM153AQ9UHL3 310 aa17.58■□□□□ 0.4
SSB-206ENST00000461708 TMPRSS11EQ9UL52 423 aa17.58■□□□□ 0.4
SSB-206ENST00000461708 ZNF106Q9H2Y7 1883 aaKnown RBP17.57■□□□□ 0.4
SSB-206ENST00000461708 LOC101059948A0A1B0GTJ6 334 aa17.57■□□□□ 0.4
SSB-206ENST00000461708 PDZK1P1A8MUH7 402 aa17.57■□□□□ 0.4
SSB-206ENST00000461708 PSTPIP1O43586 416 aa17.57■□□□□ 0.4
SSB-206ENST00000461708 BRAFP15056 766 aa17.57■□□□□ 0.4
SSB-206ENST00000461708 STAT5AP42229 794 aa17.57■□□□□ 0.4
SSB-206ENST00000461708 DYNLT1P63172 113 aa17.57■□□□□ 0.4
SSB-206ENST00000461708 WASHC5Q12768 1159 aa17.57■□□□□ 0.4
SSB-206ENST00000461708 ATP13A5Q4VNC0 1218 aa17.57■□□□□ 0.4
SSB-206ENST00000461708 KHDC1Q4VXA5 237 aaKnown RBP17.57■□□□□ 0.4
SSB-206ENST00000461708 KDELC1Q6UW63 502 aa17.57■□□□□ 0.4
SSB-206ENST00000461708 PRSS42Q7Z5A4 293 aa17.57■□□□□ 0.4
SSB-206ENST00000461708 CNGA4Q8IV77 575 aa17.57■□□□□ 0.4
SSB-206ENST00000461708 ZNF768Q9H5H4 540 aaKnown RBP17.57■□□□□ 0.4
SSB-206ENST00000461708 IL26Q9NPH9 171 aa17.57■□□□□ 0.4
SSB-206ENST00000461708 KLHL3Q9UH77 587 aa17.57■□□□□ 0.4
SSB-206ENST00000461708 SLC30A1Q9Y6M5 507 aa17.57■□□□□ 0.4
SSB-206ENST00000461708 AURKAO14965 403 aa17.56■□□□□ 0.4
SSB-206ENST00000461708 NKX2-8O15522 239 aa17.56■□□□□ 0.4
SSB-206ENST00000461708 SPOPO43791 374 aa17.56■□□□□ 0.4
SSB-206ENST00000461708 CST8O60676 142 aa17.56■□□□□ 0.4
SSB-206ENST00000461708 SLC4A1P02730 911 aa17.56■□□□□ 0.4
SSB-206ENST00000461708 AMD1P17707 334 aa17.56■□□□□ 0.4
SSB-206ENST00000461708 COMTP21964 271 aa17.56■□□□□ 0.4
SSB-206ENST00000461708 CD68P34810 354 aaPredicted RBP17.56■□□□□ 0.4
SSB-206ENST00000461708 CAPZBP47756 277 aa17.56■□□□□ 0.4
SSB-206ENST00000461708 GFERP55789 205 aa17.56■□□□□ 0.4
SSB-206ENST00000461708 WNT3AP56704 352 aa17.56■□□□□ 0.4
SSB-206ENST00000461708 DMPKQ09013 629 aa17.56■□□□□ 0.4
SSB-206ENST00000461708 CDC20Q12834 499 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms