RNA–Protein interactions for RNA: ENST00000461522.1

UBA3-204, Transcript of ubiquitin like modifier activating enzyme 3, human

TSL 2

Gene UBA3, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA3-204	ENST00000461522	ACAD8	Q9UKU7	415 aa		4.13	□□□□□ -1.75
UBA3-204	ENST00000461522	RNF123	Q5XPI4	1314 aa		4.13	□□□□□ -1.75
UBA3-204	ENST00000461522	KCP	Q6ZWJ8	1503 aa		4.12	□□□□□ -1.75
UBA3-204	ENST00000461522	ASPDH	A6ND91	283 aa		4.12	□□□□□ -1.75
UBA3-204	ENST00000461522	AKR1B15	C9JRZ8	316 aa	Predicted RBP	4.12	□□□□□ -1.75
UBA3-204	ENST00000461522	BCAT2	O15382	392 aa	Predicted RBP	4.12	□□□□□ -1.75
UBA3-204	ENST00000461522	SLC22A3	O75751	556 aa		4.12	□□□□□ -1.75
UBA3-204	ENST00000461522	UROD	P06132	367 aa		4.12	□□□□□ -1.75
UBA3-204	ENST00000461522	CDH1	P12830	882 aa		4.12	□□□□□ -1.75
UBA3-204	ENST00000461522	RFC4	P35249	363 aa		4.12	□□□□□ -1.75
UBA3-204	ENST00000461522	TIMP3	P35625	211 aa		4.12	□□□□□ -1.75
UBA3-204	ENST00000461522	EIF2S3	P41091	472 aa	Known RBP	4.12	□□□□□ -1.75
UBA3-204	ENST00000461522	RAD23B	P54727	409 aa		4.12	□□□□□ -1.75
UBA3-204	ENST00000461522	VEPH1	Q14D04	833 aa		4.12	□□□□□ -1.75
UBA3-204	ENST00000461522	CTF1	Q16619	201 aa		4.12	□□□□□ -1.75
UBA3-204	ENST00000461522	PARP10	Q53GL7	1025 aa		4.12	□□□□□ -1.75
UBA3-204	ENST00000461522	ZNF766	Q5HY98	468 aa		4.12	□□□□□ -1.75
UBA3-204	ENST00000461522	TAOK1	Q7L7X3	1001 aa		4.12	□□□□□ -1.75
UBA3-204	ENST00000461522	LINGO2	Q7L985	606 aa		4.12	□□□□□ -1.75
UBA3-204	ENST00000461522	SLC9B2	Q86UD5	537 aa		4.12	□□□□□ -1.75
UBA3-204	ENST00000461522	TMEM219	Q86XT9	240 aa		4.12	□□□□□ -1.75
UBA3-204	ENST00000461522	ODF3L1	Q8IXM7	274 aa		4.12	□□□□□ -1.75
UBA3-204	ENST00000461522	KLHDC8B	Q8IXV7	354 aa		4.12	□□□□□ -1.75
UBA3-204	ENST00000461522	DSEL	Q8IZU8	1212 aa		4.12	□□□□□ -1.75
UBA3-204	ENST00000461522	TRMT61B	Q9BVS5	477 aa	Known RBP	4.12	□□□□□ -1.75
UBA3-204	ENST00000461522	API5	Q9BZZ5	524 aa	Known RBP	4.12	□□□□□ -1.75
UBA3-204	ENST00000461522	CSTL1	Q9H114	145 aa		4.12	□□□□□ -1.75
UBA3-204	ENST00000461522	PLEKHA5	Q9HAU0	1116 aa		4.12	□□□□□ -1.75
UBA3-204	ENST00000461522	MAGEE1	Q9HCI5	957 aa		4.12	□□□□□ -1.75
UBA3-204	ENST00000461522	ABCF3	Q9NUQ8	709 aa		4.12	□□□□□ -1.75
UBA3-204	ENST00000461522	TMEM30A	Q9NV96	361 aa		4.12	□□□□□ -1.75
UBA3-204	ENST00000461522	CLIC5	Q9NZA1	410 aa		4.12	□□□□□ -1.75
UBA3-204	ENST00000461522	RCOR1	Q9UKL0	485 aa		4.12	□□□□□ -1.75
UBA3-204	ENST00000461522	PDS5A	Q29RF7	1337 aa	Known RBP	4.12	□□□□□ -1.75
UBA3-204	ENST00000461522	MAP3K15	Q6ZN16	1313 aa		4.12	□□□□□ -1.75
UBA3-204	ENST00000461522	KIF16B	Q96L93	1317 aa		4.12	□□□□□ -1.75
UBA3-204	ENST00000461522	GREB1L	Q9C091	1923 aa	Predicted RBP	4.11	□□□□□ -1.75
UBA3-204	ENST00000461522	NHS	Q6T4R5	1651 aa		4.11	□□□□□ -1.75
UBA3-204	ENST00000461522	MT-CYB	P00156	380 aa	Predicted RBP	4.11	□□□□□ -1.75
UBA3-204	ENST00000461522	GALT	P07902	379 aa		4.11	□□□□□ -1.75
UBA3-204	ENST00000461522	CYC1	P08574	325 aa		4.11	□□□□□ -1.75
UBA3-204	ENST00000461522	G6PD	P11413	515 aa		4.11	□□□□□ -1.75
UBA3-204	ENST00000461522	EIF2S2	P20042	333 aa	Known RBP	4.11	□□□□□ -1.75
UBA3-204	ENST00000461522	MAOA	P21397	527 aa		4.11	□□□□□ -1.75
UBA3-204	ENST00000461522	S1PR1	P21453	382 aa		4.11	□□□□□ -1.75
UBA3-204	ENST00000461522	POU1F1	P28069	291 aa		4.11	□□□□□ -1.75
UBA3-204	ENST00000461522	TM4SF1	P30408	202 aa		4.11	□□□□□ -1.75
UBA3-204	ENST00000461522	PPM1F	P49593	454 aa	Predicted RBP	4.11	□□□□□ -1.75
UBA3-204	ENST00000461522	CLK1	P49759	484 aa	Known RBP	4.11	□□□□□ -1.75
UBA3-204	ENST00000461522	RGS19	P49795	217 aa		4.11	□□□□□ -1.75
UBA3-204	ENST00000461522	CCR5	P51681	352 aa		4.11	□□□□□ -1.75
UBA3-204	ENST00000461522	CLCNKA	P51800	687 aa		4.11	□□□□□ -1.75
UBA3-204	ENST00000461522	ZKSCAN8	Q15776	578 aa	Predicted RBP	4.11	□□□□□ -1.75
UBA3-204	ENST00000461522	KRT24	Q2M2I5	525 aa		4.11	□□□□□ -1.75
UBA3-204	ENST00000461522	TCTN1	Q2MV58	587 aa		4.11	□□□□□ -1.75
UBA3-204	ENST00000461522	KCNT1	Q5JUK3	1230 aa		4.11	□□□□□ -1.75
UBA3-204	ENST00000461522	SLC10A5	Q5PT55	438 aa		4.11	□□□□□ -1.75
UBA3-204	ENST00000461522	TMEM81	Q6P7N7	255 aa		4.11	□□□□□ -1.75
UBA3-204	ENST00000461522	COPS6	Q7L5N1	327 aa		4.11	□□□□□ -1.75
UBA3-204	ENST00000461522	LCA5	Q86VQ0	697 aa		4.11	□□□□□ -1.75
UBA3-204	ENST00000461522	DHX40	Q8IX18	779 aa	Known RBP	4.11	□□□□□ -1.75
UBA3-204	ENST00000461522	SLC35F3	Q8IY50	421 aa		4.11	□□□□□ -1.75
UBA3-204	ENST00000461522	ZNF34	Q8IZ26	560 aa		4.11	□□□□□ -1.75
UBA3-204	ENST00000461522	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	4.11	□□□□□ -1.75
UBA3-204	ENST00000461522	CCDC191	Q8NCU4	936 aa		4.11	□□□□□ -1.75
UBA3-204	ENST00000461522	SLC20A1	Q8WUM9	679 aa		4.11	□□□□□ -1.75
UBA3-204	ENST00000461522	HERVK_113	Q902F9	699 aa		4.11	□□□□□ -1.75
UBA3-204	ENST00000461522	DUX3	Q96PT4	197 aa		4.11	□□□□□ -1.75
UBA3-204	ENST00000461522	BBS4	Q96RK4	519 aa		4.11	□□□□□ -1.75
UBA3-204	ENST00000461522	BEX4	Q9NWD9	120 aa	Predicted RBP	4.11	□□□□□ -1.75
UBA3-204	ENST00000461522	HSPB7	Q9UBY9	170 aa		4.11	□□□□□ -1.75
UBA3-204	ENST00000461522	POU2F3	Q9UKI9	436 aa		4.11	□□□□□ -1.75
UBA3-204	ENST00000461522	HSF4	Q9ULV5	492 aa		4.11	□□□□□ -1.75
UBA3-204	ENST00000461522	TCF19	Q9Y242	345 aa		4.11	□□□□□ -1.75
UBA3-204	ENST00000461522	SHANK3	Q9BYB0	1731 aa		4.11	□□□□□ -1.75
UBA3-204	ENST00000461522	USP42	Q9H9J4	1324 aa	Known RBP	4.11	□□□□□ -1.75
UBA3-204	ENST00000461522	RGPD3	A6NKT7	1758 aa	Predicted RBP	4.11	□□□□□ -1.75
UBA3-204	ENST00000461522	RGPD2	P0DJD1	1756 aa		4.11	□□□□□ -1.75
UBA3-204	ENST00000461522	RGPD4	Q7Z3J3	1758 aa		4.11	□□□□□ -1.75
UBA3-204	ENST00000461522	SCN11A	Q9UI33	1791 aa		4.11	□□□□□ -1.75
UBA3-204	ENST00000461522	CIC	Q96RK0	1608 aa	Predicted RBP	4.1	□□□□□ -1.75
UBA3-204	ENST00000461522	WNK3	Q9BYP7	1800 aa		4.1	□□□□□ -1.75
UBA3-204	ENST00000461522	PI4KAP2	A4QPH2	592 aa		4.1	□□□□□ -1.75
UBA3-204	ENST00000461522	GOLGA6L9	A6NEM1	432 aa		4.1	□□□□□ -1.75
UBA3-204	ENST00000461522	TMEM202	A6NGA9	273 aa		4.1	□□□□□ -1.75
UBA3-204	ENST00000461522	FAM72C	H0Y354	149 aa		4.1	□□□□□ -1.75
UBA3-204	ENST00000461522	TAF4	O00268	1085 aa		4.1	□□□□□ -1.75
UBA3-204	ENST00000461522	FIBP	O43427	364 aa		4.1	□□□□□ -1.75
UBA3-204	ENST00000461522	GUCY1B2	O75343	617 aa		4.1	□□□□□ -1.75
UBA3-204	ENST00000461522	TACC1	O75410	805 aa		4.1	□□□□□ -1.75
UBA3-204	ENST00000461522	RPN1	P04843	607 aa	Known RBP	4.1	□□□□□ -1.75
UBA3-204	ENST00000461522	DDX5	P17844	614 aa	Known RBP	4.1	□□□□□ -1.75
UBA3-204	ENST00000461522	SHMT1	P34896	483 aa		4.1	□□□□□ -1.75
UBA3-204	ENST00000461522	CDKN1A	P38936	164 aa		4.1	□□□□□ -1.75
UBA3-204	ENST00000461522	USP8	P40818	1118 aa		4.1	□□□□□ -1.75
UBA3-204	ENST00000461522	IL15	P40933	162 aa	Predicted RBP	4.1	□□□□□ -1.75
UBA3-204	ENST00000461522	PITX1	P78337	314 aa	Predicted RBP	4.1	□□□□□ -1.75
UBA3-204	ENST00000461522	UBE3A	Q05086	875 aa		4.1	□□□□□ -1.75
UBA3-204	ENST00000461522	KHDRBS1	Q07666	443 aa	Known RBP eCLIP	4.1	□□□□□ -1.75
UBA3-204	ENST00000461522	WASHC5	Q12768	1159 aa		4.1	□□□□□ -1.75

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