RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 ZNF547Q8IVP9 402 aa18.66■□□□□ 0.58
COL5A1-203ENST00000460264 SYCE1Q8N0S2 351 aa18.66■□□□□ 0.58
COL5A1-203ENST00000460264 UBL4BQ8N7F7 174 aa18.66■□□□□ 0.58
COL5A1-203ENST00000460264 OR10G6Q8NH81 332 aa18.66■□□□□ 0.58
COL5A1-203ENST00000460264 DTX3LQ8TDB6 740 aa18.66■□□□□ 0.58
COL5A1-203ENST00000460264 SPATA13Q96N96 652 aa18.66■□□□□ 0.58
COL5A1-203ENST00000460264 TIMM29Q9BSF4 260 aa18.66■□□□□ 0.58
COL5A1-203ENST00000460264 AKAP7Q9P0M2 348 aaPredicted RBP18.66■□□□□ 0.58
COL5A1-203ENST00000460264 TMEM9Q9P0T7 183 aa18.66■□□□□ 0.58
COL5A1-203ENST00000460264 GLYATL1P3A0A0U1RQE8 302 aa18.65■□□□□ 0.58
COL5A1-203ENST00000460264 TEX51A0A1B0GUA7 166 aa18.65■□□□□ 0.58
COL5A1-203ENST00000460264 OR5K4A6NMS3 321 aa18.65■□□□□ 0.58
COL5A1-203ENST00000460264 GAPDHSO14556 408 aaPredicted RBP18.65■□□□□ 0.58
COL5A1-203ENST00000460264 GPR39O43194 453 aa18.65■□□□□ 0.58
COL5A1-203ENST00000460264 BUD23O43709 281 aaKnown RBP18.65■□□□□ 0.58
COL5A1-203ENST00000460264 DUX1O43812 170 aa18.65■□□□□ 0.58
COL5A1-203ENST00000460264 PPFIA2O75334 1257 aa18.65■□□□□ 0.58
COL5A1-203ENST00000460264 CDK14O94921 469 aa18.65■□□□□ 0.58
COL5A1-203ENST00000460264 FTCDO95954 541 aa18.65■□□□□ 0.58
COL5A1-203ENST00000460264 ADRA1AP35348 466 aa18.65■□□□□ 0.58
COL5A1-203ENST00000460264 MAPK10P53779 464 aa18.65■□□□□ 0.58
COL5A1-203ENST00000460264 CHRNA6Q15825 494 aa18.65■□□□□ 0.58
COL5A1-203ENST00000460264 RANBP10Q6VN20 620 aa18.65■□□□□ 0.58
COL5A1-203ENST00000460264 GDAP1Q8TB36 358 aa18.65■□□□□ 0.58
COL5A1-203ENST00000460264 CCDC110Q8TBZ0 833 aa18.65■□□□□ 0.58
COL5A1-203ENST00000460264 SH3KBP1Q96B97 665 aa18.65■□□□□ 0.58
COL5A1-203ENST00000460264 AHCYL2Q96HN2 611 aaKnown RBP18.65■□□□□ 0.58
COL5A1-203ENST00000460264 ZMYND15Q9H091 742 aa18.65■□□□□ 0.58
COL5A1-203ENST00000460264 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.65■□□□□ 0.58
COL5A1-203ENST00000460264 FOXJ2Q9P0K8 574 aa18.65■□□□□ 0.58
COL5A1-203ENST00000460264 CPNE7Q9UBL6 633 aa18.65■□□□□ 0.58
COL5A1-203ENST00000460264 AAR2Q9Y312 384 aaKnown RBP18.65■□□□□ 0.58
COL5A1-203ENST00000460264 PKP3Q9Y446 797 aa18.65■□□□□ 0.58
COL5A1-203ENST00000460264 SDK2Q58EX2 2172 aa18.65■□□□□ 0.58
COL5A1-203ENST00000460264 ATMQ13315 3056 aa18.65■□□□□ 0.58
COL5A1-203ENST00000460264 C9orf172C9J069 976 aa18.64■□□□□ 0.57
COL5A1-203ENST00000460264 DDX3YO15523 660 aaKnown RBP18.64■□□□□ 0.57
COL5A1-203ENST00000460264 CCL4P13236 92 aa18.64■□□□□ 0.57
COL5A1-203ENST00000460264 MPSTP25325 297 aa18.64■□□□□ 0.57
COL5A1-203ENST00000460264 EPHA4P54764 986 aa18.64■□□□□ 0.57
COL5A1-203ENST00000460264 UBE2IP63279 158 aaKnown RBP18.64■□□□□ 0.57
COL5A1-203ENST00000460264 VAC14Q08AM6 782 aa18.64■□□□□ 0.57
COL5A1-203ENST00000460264 TMEM115Q12893 351 aaPredicted RBP18.64■□□□□ 0.57
COL5A1-203ENST00000460264 OLIG2Q13516 323 aa18.64■□□□□ 0.57
COL5A1-203ENST00000460264 TMEM71Q6P5X7 295 aa18.64■□□□□ 0.57
COL5A1-203ENST00000460264 C11orf96Q7Z7L8 435 aa18.64■□□□□ 0.57
COL5A1-203ENST00000460264 TRAPPC5Q8IUR0 188 aa18.64■□□□□ 0.57
COL5A1-203ENST00000460264 AVL9Q8NBF6 648 aa18.64■□□□□ 0.57
COL5A1-203ENST00000460264 SNRNP27Q8WVK2 155 aaKnown RBP18.64■□□□□ 0.57
COL5A1-203ENST00000460264 USP7Q93009 1102 aa18.64■□□□□ 0.57
COL5A1-203ENST00000460264 APOL2Q9BQE5 337 aa18.64■□□□□ 0.57
COL5A1-203ENST00000460264 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.64■□□□□ 0.57
COL5A1-203ENST00000460264 SCHIP1Q9P0W5 487 aaPredicted RBP18.64■□□□□ 0.57
COL5A1-203ENST00000460264 PDP2Q9P2J9 529 aa18.64■□□□□ 0.57
COL5A1-203ENST00000460264 DNAJC16Q9Y2G8 782 aa18.64■□□□□ 0.57
COL5A1-203ENST00000460264 ARL5AQ9Y689 179 aa18.64■□□□□ 0.57
COL5A1-203ENST00000460264 CAPN6Q9Y6Q1 641 aa18.64■□□□□ 0.57
COL5A1-203ENST00000460264 KALRNO60229 2985 aa18.64■□□□□ 0.57
COL5A1-203ENST00000460264 UGT1A9O60656 530 aa18.63■□□□□ 0.57
COL5A1-203ENST00000460264 ZNF189O75820 626 aaPredicted RBP18.63■□□□□ 0.57
COL5A1-203ENST00000460264 UGT1A6P19224 532 aa18.63■□□□□ 0.57
COL5A1-203ENST00000460264 UGT1A1P22309 533 aa18.63■□□□□ 0.57
COL5A1-203ENST00000460264 UGT1A4P22310 534 aa18.63■□□□□ 0.57
COL5A1-203ENST00000460264 CA5AP35218 305 aa18.63■□□□□ 0.57
COL5A1-203ENST00000460264 UGT1A3P35503 534 aa18.63■□□□□ 0.57
COL5A1-203ENST00000460264 PPM1FP49593 454 aaPredicted RBP18.63■□□□□ 0.57
COL5A1-203ENST00000460264 KLF1Q13351 362 aaPredicted RBP18.63■□□□□ 0.57
COL5A1-203ENST00000460264 ITGA9Q13797 1035 aa18.63■□□□□ 0.57
COL5A1-203ENST00000460264 GTF2H3Q13889 308 aa18.63■□□□□ 0.57
COL5A1-203ENST00000460264 PRPSAP1Q14558 356 aa18.63■□□□□ 0.57
COL5A1-203ENST00000460264 PTPRCAPQ14761 206 aa18.63■□□□□ 0.57
COL5A1-203ENST00000460264 LDLRAP1Q5SW96 308 aa18.63■□□□□ 0.57
COL5A1-203ENST00000460264 ARHGAP40Q5TG30 622 aa18.63■□□□□ 0.57
COL5A1-203ENST00000460264 WDR74Q6RFH5 385 aaPredicted RBP18.63■□□□□ 0.57
COL5A1-203ENST00000460264 TTC13Q8NBP0 860 aa18.63■□□□□ 0.57
COL5A1-203ENST00000460264 AGBL5Q8NDL9 886 aa18.63■□□□□ 0.57
COL5A1-203ENST00000460264 DDHD1Q8NEL9 900 aa18.63■□□□□ 0.57
COL5A1-203ENST00000460264 PPP1R2P1Q96PQ5 205 aa18.63■□□□□ 0.57
COL5A1-203ENST00000460264 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.63■□□□□ 0.57
COL5A1-203ENST00000460264 ZCCHC2Q9C0B9 1178 aaKnown RBP18.63■□□□□ 0.57
COL5A1-203ENST00000460264 B3GNT4Q9C0J1 378 aa18.63■□□□□ 0.57
COL5A1-203ENST00000460264 UGT1A7Q9HAW7 530 aa18.63■□□□□ 0.57
COL5A1-203ENST00000460264 UGT1A10Q9HAW8 530 aa18.63■□□□□ 0.57
COL5A1-203ENST00000460264 UGT1A8Q9HAW9 530 aa18.63■□□□□ 0.57
COL5A1-203ENST00000460264 SMOXQ9NWM0 555 aa18.63■□□□□ 0.57
COL5A1-203ENST00000460264 SMG1Q96Q15 3661 aaKnown RBP18.62■□□□□ 0.57
COL5A1-203ENST00000460264 GOLGA6L9A6NEM1 432 aa18.62■□□□□ 0.57
COL5A1-203ENST00000460264 LILRA5A6NI73 299 aa18.62■□□□□ 0.57
COL5A1-203ENST00000460264 PDZK1P1A8MUH7 402 aa18.62■□□□□ 0.57
COL5A1-203ENST00000460264 ATXN7O15265 892 aaPredicted RBP18.62■□□□□ 0.57
COL5A1-203ENST00000460264 STX7O15400 261 aaKnown RBP18.62■□□□□ 0.57
COL5A1-203ENST00000460264 PTMAP06454 111 aaKnown RBP18.62■□□□□ 0.57
COL5A1-203ENST00000460264 LIPCP11150 499 aa18.62■□□□□ 0.57
COL5A1-203ENST00000460264 FGF3P11487 239 aaPredicted RBP18.62■□□□□ 0.57
COL5A1-203ENST00000460264 LPOP22079 712 aaPredicted RBP18.62■□□□□ 0.57
COL5A1-203ENST00000460264 TAF1AQ15573 450 aaPredicted RBP18.62■□□□□ 0.57
COL5A1-203ENST00000460264 TGIF1Q15583 401 aa18.62■□□□□ 0.57
COL5A1-203ENST00000460264 SEPT7Q16181 437 aaKnown RBP18.62■□□□□ 0.57
COL5A1-203ENST00000460264 GPRC6AQ5T6X5 926 aa18.62■□□□□ 0.57
COL5A1-203ENST00000460264 KLHDC8BQ8IXV7 354 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms