RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 CCDC154A6NI56 674 aa17.96■□□□□ 0.47
HPS3-202ENST00000460120 TBC1D4O60343 1298 aa17.96■□□□□ 0.47
HPS3-202ENST00000460120 CHEK2O96017 543 aa17.96■□□□□ 0.47
HPS3-202ENST00000460120 IDO1P14902 403 aa17.96■□□□□ 0.47
HPS3-202ENST00000460120 CA8P35219 290 aa17.96■□□□□ 0.47
HPS3-202ENST00000460120 HSPA13P48723 471 aa17.96■□□□□ 0.47
HPS3-202ENST00000460120 ATP6V0D1P61421 351 aa17.96■□□□□ 0.47
HPS3-202ENST00000460120 BLOC1S3Q6QNY0 202 aa17.96■□□□□ 0.47
HPS3-202ENST00000460120 GPRIN3Q6ZVF9 776 aa17.96■□□□□ 0.47
HPS3-202ENST00000460120 TMEM126BQ8IUX1 230 aa17.96■□□□□ 0.47
HPS3-202ENST00000460120 FAM47BQ8NA70 645 aa17.96■□□□□ 0.47
HPS3-202ENST00000460120 TMIGD2Q96BF3 282 aa17.96■□□□□ 0.47
HPS3-202ENST00000460120 EID2BQ96D98 161 aa17.96■□□□□ 0.47
HPS3-202ENST00000460120 SOX17Q9H6I2 414 aaPredicted RBP17.96■□□□□ 0.47
HPS3-202ENST00000460120 TRPM5Q9NZQ8 1165 aa17.96■□□□□ 0.47
HPS3-202ENST00000460120 A0A1B0GVM2 712 aa17.95■□□□□ 0.46
HPS3-202ENST00000460120 KLHL33A6NCF5 533 aa17.95■□□□□ 0.46
HPS3-202ENST00000460120 HTRA2O43464 458 aaPredicted RBP17.95■□□□□ 0.46
HPS3-202ENST00000460120 CD160O95971 181 aa17.95■□□□□ 0.46
HPS3-202ENST00000460120 INHAP05111 366 aa17.95■□□□□ 0.46
HPS3-202ENST00000460120 MBL2P11226 248 aaPredicted RBP17.95■□□□□ 0.46
HPS3-202ENST00000460120 ALDH7A1P49419 539 aaKnown RBP17.95■□□□□ 0.46
HPS3-202ENST00000460120 ERVPABLB-1P60509 514 aa17.95■□□□□ 0.46
HPS3-202ENST00000460120 LETMD1Q6P1Q0 360 aa17.95■□□□□ 0.46
HPS3-202ENST00000460120 IL27RAQ6UWB1 636 aa17.95■□□□□ 0.46
HPS3-202ENST00000460120 NPAS4Q8IUM7 802 aa17.95■□□□□ 0.46
HPS3-202ENST00000460120 CHERPQ8IWX8 916 aaKnown RBP17.95■□□□□ 0.46
HPS3-202ENST00000460120 AHI1Q8N157 1196 aa17.95■□□□□ 0.46
HPS3-202ENST00000460120 NKAPQ8N5F7 415 aaKnown RBP17.95■□□□□ 0.46
HPS3-202ENST00000460120 TRIML2Q8N7C3 387 aa17.95■□□□□ 0.46
HPS3-202ENST00000460120 CCT7Q99832 543 aa17.95■□□□□ 0.46
HPS3-202ENST00000460120 MRPS26Q9BYN8 205 aaKnown RBP17.95■□□□□ 0.46
HPS3-202ENST00000460120 SRRDQ9UH36 339 aa17.95■□□□□ 0.46
HPS3-202ENST00000460120 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.95■□□□□ 0.46
HPS3-202ENST00000460120 MOXD2PA6NHM9 499 aa17.95■□□□□ 0.46
HPS3-202ENST00000460120 BBIP1A8MTZ0 92 aa17.95■□□□□ 0.46
HPS3-202ENST00000460120 H3BSA7 217 aa17.95■□□□□ 0.46
HPS3-202ENST00000460120 ARVCFO00192 962 aa17.95■□□□□ 0.46
HPS3-202ENST00000460120 FFAR3O14843 346 aa17.95■□□□□ 0.46
HPS3-202ENST00000460120 GPR42O15529 346 aa17.95■□□□□ 0.46
HPS3-202ENST00000460120 AP1G1O43747 822 aa17.95■□□□□ 0.46
HPS3-202ENST00000460120 TRIM16O95361 564 aa17.95■□□□□ 0.46
HPS3-202ENST00000460120 F11P03951 625 aa17.95■□□□□ 0.46
HPS3-202ENST00000460120 HOXB8P17481 243 aaPredicted RBP17.95■□□□□ 0.46
HPS3-202ENST00000460120 IL12AP29459 219 aa17.95■□□□□ 0.46
HPS3-202ENST00000460120 GDF5P43026 501 aa17.95■□□□□ 0.46
HPS3-202ENST00000460120 LIPEQ05469 1076 aa17.95■□□□□ 0.46
HPS3-202ENST00000460120 TGFBIQ15582 683 aa17.95■□□□□ 0.46
HPS3-202ENST00000460120 SGO1Q5FBB7 561 aa17.95■□□□□ 0.46
HPS3-202ENST00000460120 ADGRF1Q5T601 910 aa17.95■□□□□ 0.46
HPS3-202ENST00000460120 ALG1LQ6GMV1 187 aa17.95■□□□□ 0.46
HPS3-202ENST00000460120 PEX13Q92968 403 aa17.95■□□□□ 0.46
HPS3-202ENST00000460120 ZNF597Q96LX8 424 aa17.95■□□□□ 0.46
HPS3-202ENST00000460120 MRGBPQ9NV56 204 aa17.95■□□□□ 0.46
HPS3-202ENST00000460120 GID8Q9NWU2 228 aa17.95■□□□□ 0.46
HPS3-202ENST00000460120 THSD7BQ9C0I4 1608 aa17.94■□□□□ 0.46
HPS3-202ENST00000460120 ILVBLA1L0T0 632 aa17.94■□□□□ 0.46
HPS3-202ENST00000460120 SLC22A3O75751 556 aa17.94■□□□□ 0.46
HPS3-202ENST00000460120 ESRRBO95718 433 aa17.94■□□□□ 0.46
HPS3-202ENST00000460120 CAPN1P07384 714 aa17.94■□□□□ 0.46
HPS3-202ENST00000460120 PSMA4P25789 261 aaKnown RBP17.94■□□□□ 0.46
HPS3-202ENST00000460120 CALRP27797 417 aaKnown RBP17.94■□□□□ 0.46
HPS3-202ENST00000460120 TTPAP49638 278 aa17.94■□□□□ 0.46
HPS3-202ENST00000460120 GSK3BP49841 420 aa17.94■□□□□ 0.46
HPS3-202ENST00000460120 RPL26P61254 145 aaKnown RBP17.94■□□□□ 0.46
HPS3-202ENST00000460120 SMAD3P84022 425 aaKnown RBP17.94■□□□□ 0.46
HPS3-202ENST00000460120 TSPAN14Q8NG11 270 aa17.94■□□□□ 0.46
HPS3-202ENST00000460120 OR56A4Q8NGH8 313 aa17.94■□□□□ 0.46
HPS3-202ENST00000460120 METTL6Q8TCB7 284 aa17.94■□□□□ 0.46
HPS3-202ENST00000460120 TOP1MTQ969P6 601 aa17.94■□□□□ 0.46
HPS3-202ENST00000460120 PPM1MQ96MI6 270 aa17.94■□□□□ 0.46
HPS3-202ENST00000460120 HOPXQ9BPY8 73 aaPredicted RBP17.94■□□□□ 0.46
HPS3-202ENST00000460120 KCTD14Q9BQ13 255 aaPredicted RBP17.94■□□□□ 0.46
HPS3-202ENST00000460120 VN1R3Q9BXE9 311 aa17.94■□□□□ 0.46
HPS3-202ENST00000460120 ALG2Q9H553 416 aa17.94■□□□□ 0.46
HPS3-202ENST00000460120 TLR9Q9NR96 1032 aa17.94■□□□□ 0.46
HPS3-202ENST00000460120 EVLQ9UI08 416 aaPredicted RBP17.94■□□□□ 0.46
HPS3-202ENST00000460120 SLC30A1Q9Y6M5 507 aa17.94■□□□□ 0.46
HPS3-202ENST00000460120 HMGA1P17096 107 aaKnown RBP17.94■□□□□ 0.46
HPS3-202ENST00000460120 UGT1A1P22309 533 aa17.94■□□□□ 0.46
HPS3-202ENST00000460120 UGT1A4P22310 534 aa17.94■□□□□ 0.46
HPS3-202ENST00000460120 UGT1A3P35503 534 aa17.94■□□□□ 0.46
HPS3-202ENST00000460120 UGT1A5P35504 534 aa17.94■□□□□ 0.46
HPS3-202ENST00000460120 DGKQP52824 942 aa17.94■□□□□ 0.46
HPS3-202ENST00000460120 PTRHD1Q6GMV3 140 aaKnown RBP17.94■□□□□ 0.46
HPS3-202ENST00000460120 CMTR2Q8IYT2 770 aaKnown RBP17.94■□□□□ 0.46
HPS3-202ENST00000460120 CYGBQ8WWM9 190 aa17.94■□□□□ 0.46
HPS3-202ENST00000460120 PHF12Q96QT6 1004 aa17.94■□□□□ 0.46
HPS3-202ENST00000460120 OAZ3Q9UMX2 235 aa17.94■□□□□ 0.46
HPS3-202ENST00000460120 PKP3Q9Y446 797 aa17.94■□□□□ 0.46
HPS3-202ENST00000460120 SMIM31A0A1B0GVY4 71 aa17.93■□□□□ 0.46
HPS3-202ENST00000460120 E2F3O00716 465 aa17.93■□□□□ 0.46
HPS3-202ENST00000460120 UROSP10746 265 aa17.93■□□□□ 0.46
HPS3-202ENST00000460120 GGT5P36269 586 aa17.93■□□□□ 0.46
HPS3-202ENST00000460120 CSKP41240 450 aa17.93■□□□□ 0.46
HPS3-202ENST00000460120 POLR2JP52435 117 aaKnown RBP17.93■□□□□ 0.46
HPS3-202ENST00000460120 LHX8Q68G74 356 aa17.93■□□□□ 0.46
HPS3-202ENST00000460120 HACD2Q6Y1H2 254 aa17.93■□□□□ 0.46
HPS3-202ENST00000460120 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.93■□□□□ 0.46
HPS3-202ENST00000460120 ERMP1Q7Z2K6 904 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms