RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 KCNE4Q8WWG9 221 aa15.9■□□□□ 0.14
COL7A1-203ENST00000459756 TTC25Q96NG3 672 aa15.9■□□□□ 0.14
COL7A1-203ENST00000459756 APOL2Q9BQE5 337 aa15.9■□□□□ 0.14
COL7A1-203ENST00000459756 NUDT22Q9BRQ3 303 aa15.9■□□□□ 0.14
COL7A1-203ENST00000459756 DPH1Q9BZG8 443 aa15.9■□□□□ 0.14
COL7A1-203ENST00000459756 SEMA6CQ9H3T2 930 aa15.9■□□□□ 0.14
COL7A1-203ENST00000459756 AKAP7Q9P0M2 348 aaPredicted RBP15.9■□□□□ 0.14
COL7A1-203ENST00000459756 R3HDM2Q9Y2K5 976 aaKnown RBP15.9■□□□□ 0.14
COL7A1-203ENST00000459756 LOXL2Q9Y4K0 774 aa15.9■□□□□ 0.14
COL7A1-203ENST00000459756 PCDHGA7Q9Y5G6 932 aa15.9■□□□□ 0.14
COL7A1-203ENST00000459756 ARL5AQ9Y689 179 aa15.9■□□□□ 0.14
COL7A1-203ENST00000459756 LOC400499M0QZD8 3231 aa15.89■□□□□ 0.13
COL7A1-203ENST00000459756 TCRBV7S2A1N4TA0A589 114 aa15.89■□□□□ 0.13
COL7A1-203ENST00000459756 BUD23O43709 281 aaKnown RBP15.89■□□□□ 0.13
COL7A1-203ENST00000459756 CRTAMO95727 393 aa15.89■□□□□ 0.13
COL7A1-203ENST00000459756 ZNF7P17097 686 aaPredicted RBP15.89■□□□□ 0.13
COL7A1-203ENST00000459756 VCLP18206 1134 aa15.89■□□□□ 0.13
COL7A1-203ENST00000459756 OLIG2Q13516 323 aa15.89■□□□□ 0.13
COL7A1-203ENST00000459756 P3H1Q32P28 736 aa15.89■□□□□ 0.13
COL7A1-203ENST00000459756 SEL1L2Q5TEA6 688 aa15.89■□□□□ 0.13
COL7A1-203ENST00000459756 TRAPPC5Q8IUR0 188 aa15.89■□□□□ 0.13
COL7A1-203ENST00000459756 DDHD1Q8NEL9 900 aa15.89■□□□□ 0.13
COL7A1-203ENST00000459756 OR4D9Q8NGE8 314 aa15.89■□□□□ 0.13
COL7A1-203ENST00000459756 OR10G6Q8NH81 332 aa15.89■□□□□ 0.13
COL7A1-203ENST00000459756 NAF1Q96HR8 494 aaKnown RBP15.89■□□□□ 0.13
COL7A1-203ENST00000459756 C19orf43Q9BQ61 176 aa15.89■□□□□ 0.13
COL7A1-203ENST00000459756 TBL1YQ9BQ87 522 aa15.89■□□□□ 0.13
COL7A1-203ENST00000459756 FRMD8P1Q9BZ68 369 aaPredicted RBP15.89■□□□□ 0.13
COL7A1-203ENST00000459756 OSGEPL1Q9H4B0 414 aa15.89■□□□□ 0.13
COL7A1-203ENST00000459756 ARNT2Q9HBZ2 717 aa15.89■□□□□ 0.13
COL7A1-203ENST00000459756 PRDM8Q9NQV8 689 aa15.89■□□□□ 0.13
COL7A1-203ENST00000459756 SMOXQ9NWM0 555 aa15.89■□□□□ 0.13
COL7A1-203ENST00000459756 SLC23A2Q9UGH3 650 aa15.89■□□□□ 0.13
COL7A1-203ENST00000459756 ZNF106Q9H2Y7 1883 aaKnown RBP15.88■□□□□ 0.13
COL7A1-203ENST00000459756 IGHV5-10-1A0A0J9YXX1 117 aa15.88■□□□□ 0.13
COL7A1-203ENST00000459756 PRR19A6NJB7 356 aa15.88■□□□□ 0.13
COL7A1-203ENST00000459756 GAPDHSO14556 408 aaPredicted RBP15.88■□□□□ 0.13
COL7A1-203ENST00000459756 HGSO14964 777 aaPredicted RBP15.88■□□□□ 0.13
COL7A1-203ENST00000459756 DUX1O43812 170 aa15.88■□□□□ 0.13
COL7A1-203ENST00000459756 UGT1A9O60656 530 aa15.88■□□□□ 0.13
COL7A1-203ENST00000459756 KCNJ13O60928 360 aa15.88■□□□□ 0.13
COL7A1-203ENST00000459756 CCDC175P0C221 793 aa15.88■□□□□ 0.13
COL7A1-203ENST00000459756 HGFP14210 728 aa15.88■□□□□ 0.13
COL7A1-203ENST00000459756 UGT1A6P19224 532 aa15.88■□□□□ 0.13
COL7A1-203ENST00000459756 UGT1A1P22309 533 aa15.88■□□□□ 0.13
COL7A1-203ENST00000459756 UGT1A4P22310 534 aa15.88■□□□□ 0.13
COL7A1-203ENST00000459756 UGT1A3P35503 534 aa15.88■□□□□ 0.13
COL7A1-203ENST00000459756 LIMK2P53671 638 aa15.88■□□□□ 0.13
COL7A1-203ENST00000459756 UCNP55089 124 aa15.88■□□□□ 0.13
COL7A1-203ENST00000459756 TRA2AQ13595 282 aaKnown RBP eCLIP15.88■□□□□ 0.13
COL7A1-203ENST00000459756 PLA2G4EQ3MJ16 856 aa15.88■□□□□ 0.13
COL7A1-203ENST00000459756 BROXQ5VW32 411 aa15.88■□□□□ 0.13
COL7A1-203ENST00000459756 NKAIN2Q5VXU1 208 aa15.88■□□□□ 0.13
COL7A1-203ENST00000459756 DENND5AQ6IQ26 1287 aa15.88■□□□□ 0.13
COL7A1-203ENST00000459756 ZNF574Q6ZN55 896 aaPredicted RBP15.88■□□□□ 0.13
COL7A1-203ENST00000459756 ZNF662Q6ZS27 426 aa15.88■□□□□ 0.13
COL7A1-203ENST00000459756 OR4K2Q8NGD2 314 aa15.88■□□□□ 0.13
COL7A1-203ENST00000459756 AHCYL2Q96HN2 611 aaKnown RBP15.88■□□□□ 0.13
COL7A1-203ENST00000459756 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.88■□□□□ 0.13
COL7A1-203ENST00000459756 UGT1A7Q9HAW7 530 aa15.88■□□□□ 0.13
COL7A1-203ENST00000459756 UGT1A10Q9HAW8 530 aa15.88■□□□□ 0.13
COL7A1-203ENST00000459756 UGT1A8Q9HAW9 530 aa15.88■□□□□ 0.13
COL7A1-203ENST00000459756 CPNE7Q9UBL6 633 aa15.88■□□□□ 0.13
COL7A1-203ENST00000459756 PISDQ9UG56 409 aa15.88■□□□□ 0.13
COL7A1-203ENST00000459756 PTPRQQ9UMZ3 2332 aa15.87■□□□□ 0.13
COL7A1-203ENST00000459756 PRAMEF1O95521 474 aa15.87■□□□□ 0.13
COL7A1-203ENST00000459756 HOXB3P14651 431 aaPredicted RBP15.87■□□□□ 0.13
COL7A1-203ENST00000459756 XRCC1P18887 633 aaPredicted RBP15.87■□□□□ 0.13
COL7A1-203ENST00000459756 SLC5A2P31639 672 aa15.87■□□□□ 0.13
COL7A1-203ENST00000459756 CSF2RBP32927 897 aa15.87■□□□□ 0.13
COL7A1-203ENST00000459756 EPHA4P54764 986 aa15.87■□□□□ 0.13
COL7A1-203ENST00000459756 UBE2IP63279 158 aaKnown RBP15.87■□□□□ 0.13
COL7A1-203ENST00000459756 MSLNQ13421 630 aaPredicted RBP15.87■□□□□ 0.13
COL7A1-203ENST00000459756 NFATC2Q13469 925 aa15.87■□□□□ 0.13
COL7A1-203ENST00000459756 SPARCL1Q14515 664 aa15.87■□□□□ 0.13
COL7A1-203ENST00000459756 PTPRCAPQ14761 206 aa15.87■□□□□ 0.13
COL7A1-203ENST00000459756 C16orf72Q14CZ0 275 aa15.87■□□□□ 0.13
COL7A1-203ENST00000459756 RPS6KA1Q15418 735 aa15.87■□□□□ 0.13
COL7A1-203ENST00000459756 GPRC6AQ5T6X5 926 aa15.87■□□□□ 0.13
COL7A1-203ENST00000459756 AGAP9Q5VTM2 703 aa15.87■□□□□ 0.13
COL7A1-203ENST00000459756 KCTD11Q693B1 232 aa15.87■□□□□ 0.13
COL7A1-203ENST00000459756 TMEM71Q6P5X7 295 aa15.87■□□□□ 0.13
COL7A1-203ENST00000459756 WDR74Q6RFH5 385 aaPredicted RBP15.87■□□□□ 0.13
COL7A1-203ENST00000459756 WASH2PQ6VEQ5 465 aa15.87■□□□□ 0.13
COL7A1-203ENST00000459756 ZNF761Q86XN6 746 aaPredicted RBP15.87■□□□□ 0.13
COL7A1-203ENST00000459756 JAMLQ86YT9 394 aa15.87■□□□□ 0.13
COL7A1-203ENST00000459756 LRRC8AQ8IWT6 810 aa15.87■□□□□ 0.13
COL7A1-203ENST00000459756 RASGEF1AQ8N9B8 481 aa15.87■□□□□ 0.13
COL7A1-203ENST00000459756 ZNF398Q8TD17 642 aa15.87■□□□□ 0.13
COL7A1-203ENST00000459756 RTP4Q96DX8 246 aa15.87■□□□□ 0.13
COL7A1-203ENST00000459756 CRELD1Q96HD1 420 aa15.87■□□□□ 0.13
COL7A1-203ENST00000459756 CCDC74BQ96LY2 380 aa15.87■□□□□ 0.13
COL7A1-203ENST00000459756 ALS2CR12Q96Q35 445 aa15.87■□□□□ 0.13
COL7A1-203ENST00000459756 TMEM121Q9BTD3 319 aa15.87■□□□□ 0.13
COL7A1-203ENST00000459756 ZMYND15Q9H091 742 aa15.87■□□□□ 0.13
COL7A1-203ENST00000459756 EPB41L1Q9H4G0 881 aa15.87■□□□□ 0.13
COL7A1-203ENST00000459756 PRORYQ9H606 182 aa15.87■□□□□ 0.13
COL7A1-203ENST00000459756 LRRC40Q9H9A6 602 aa15.87■□□□□ 0.13
COL7A1-203ENST00000459756 UCK1Q9HA47 277 aa15.87■□□□□ 0.13
COL7A1-203ENST00000459756 WASH6PQ9NQA3 447 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms