RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 GID4Q8IVV7 300 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 CCDC24Q8N4L8 307 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 EID2Q8N6I1 236 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 KDM1BQ8NB78 822 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 MAFIPQ8WZ33 124 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 MSANTD3Q96H12 275 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 ABCC13Q9NSE7 274 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 AGPAT5Q9NUQ2 364 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 ZNF639Q9UID6 485 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 YLPM1P49750 1951 aaKnown RBP5.18□□□□□ -1.58
CSMD3-204ENST00000455883 C17orf113A0A1B0GUU1 675 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 RPS17P08708 135 aaKnown RBP5.18□□□□□ -1.58
CSMD3-204ENST00000455883 RAP2AP10114 183 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 FEN1P39748 380 aaKnown RBP5.18□□□□□ -1.58
CSMD3-204ENST00000455883 TLE3Q04726 772 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 LRIF1Q5T3J3 769 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 NPLOC4Q8TAT6 608 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 C11orf24Q96F05 449 aaPredicted RBP5.18□□□□□ -1.58
CSMD3-204ENST00000455883 ZNF594Q96JF6 807 aaPredicted RBP5.18□□□□□ -1.58
CSMD3-204ENST00000455883 AIFM3Q96NN9 605 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 SLC30A2Q9BRI3 323 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 OR51E2Q9H255 320 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 RHPN2P1A8MT19 583 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 J3QR89 54 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 HSPA12AO43301 675 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 SLC19A2O60779 497 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 NADKO95544 446 aaPredicted RBP5.18□□□□□ -1.58
CSMD3-204ENST00000455883 SCNN1GP51170 649 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 STARD3Q14849 445 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 PTCHD3Q3KNS1 767 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 FAM46CQ5VWP2 391 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 ZNF470Q6ECI4 717 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 ZYG11AQ6WRX3 759 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 CHSY3Q70JA7 882 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 SLC43A2Q8N370 569 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 NIPA2Q8N8Q9 360 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 CGREF1Q99674 301 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 C19orf12Q9NSK7 152 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 TRMT13Q9NUP7 481 aaKnown RBP5.18□□□□□ -1.58
CSMD3-204ENST00000455883 TLR6Q9Y2C9 796 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 RIMBP3CA6NJZ7 1639 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 RIMBP3BA6NNM3 1639 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 RIMBP3Q9UFD9 1639 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 BORCS7-ASMTA0A0B4J1R7 106 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 TOR1AO14656 332 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 PRAMEF12O95522 483 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 SLC4A1P02730 911 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 GJA1P17302 382 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 CYP2F1P24903 491 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 DPP6P42658 865 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 GNPDA1P46926 289 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 CBX3Q13185 183 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 NME3Q13232 169 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 GNASQ5JWF2 1037 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 TAPT1Q6NXT6 567 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 METTL25Q8N6Q8 603 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 RNF149Q8NC42 400 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 GEMIN6Q8WXD5 167 aaKnown RBP5.18□□□□□ -1.58
CSMD3-204ENST00000455883 ALG5Q9Y673 324 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 GPR75-ASB3A0A0A6YYF3 556 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 M0QYT0 321 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 XKRYO14609 159 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 CYP1B1Q16678 543 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 MTSS1LQ765P7 747 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 NECAB2Q7Z6G3 386 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 FAM47BQ8NA70 645 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 SPATA20Q8TB22 786 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 OSTF1Q92882 214 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 CHFRQ96EP1 664 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 ZNF597Q96LX8 424 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 CSPG4P5Q96PW8 444 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 CPXM1Q96SM3 734 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 MMP19Q99542 508 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 MARCH7Q9H992 704 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 RBBP6Q7Z6E9 1792 aaKnown RBP5.17□□□□□ -1.58
CSMD3-204ENST00000455883 ANGPTL1O95841 491 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 IFNA21P01568 189 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 IDH2P48735 452 aaKnown RBP5.17□□□□□ -1.58
CSMD3-204ENST00000455883 SNRPD1P62314 119 aaKnown RBP5.17□□□□□ -1.58
CSMD3-204ENST00000455883 CAMK2DQ13557 499 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 RBM44Q6ZP01 1051 aaKnown RBP5.17□□□□□ -1.58
CSMD3-204ENST00000455883 SLC4A11Q8NBS3 891 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 TMEM161BQ8NDZ6 487 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 THAP6Q8TBB0 222 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 PIGXQ8TBF5 258 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 NSUN4Q96CB9 384 aaKnown RBP5.17□□□□□ -1.58
CSMD3-204ENST00000455883 SLC45A3Q96JT2 553 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 BTBD1Q9H0C5 482 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 IFT52Q9Y366 437 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 RREB1Q92766 1687 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 KRBOX1C9JBD0 128 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 CASKO14936 926 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 AZIN1O14977 448 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 TGOLN2O43493 480 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 RB1P06400 928 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 ALDH7A1P49419 539 aaKnown RBP5.17□□□□□ -1.58
CSMD3-204ENST00000455883 NCS1P62166 190 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 TCP10Q12799 353 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 KCNK18Q7Z418 384 aa5.17□□□□□ -1.58
CSMD3-204ENST00000455883 TXNRD3Q86VQ6 643 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms