RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 SLCO6A1Q86UG4 719 aa27.61■■■□□ 2.01
SMARCC1-203ENST00000454240 SERPINA9Q86WD7 417 aa27.61■■■□□ 2.01
SMARCC1-203ENST00000454240 SLC35F3Q8IY50 421 aa27.61■■■□□ 2.01
SMARCC1-203ENST00000454240 GLMNQ92990 594 aa27.61■■■□□ 2.01
SMARCC1-203ENST00000454240 ZDHHC3Q9NYG2 299 aa27.61■■■□□ 2.01
SMARCC1-203ENST00000454240 SPEGQ15772 3267 aa27.61■■■□□ 2.01
SMARCC1-203ENST00000454240 IGLV3-16A0A075B6K0 115 aa27.6■■■□□ 2.01
SMARCC1-203ENST00000454240 MAGEB16A2A368 324 aa27.6■■■□□ 2.01
SMARCC1-203ENST00000454240 SMAPO00193 183 aa27.6■■■□□ 2.01
SMARCC1-203ENST00000454240 SEC31AO94979 1220 aaKnown RBP27.6■■■□□ 2.01
SMARCC1-203ENST00000454240 FTH1P19P0C7X4 201 aa27.6■■■□□ 2.01
SMARCC1-203ENST00000454240 MYF5P13349 255 aa27.6■■■□□ 2.01
SMARCC1-203ENST00000454240 ACP5P13686 325 aa27.6■■■□□ 2.01
SMARCC1-203ENST00000454240 AKT1P31749 480 aa27.6■■■□□ 2.01
SMARCC1-203ENST00000454240 ACTR1BP42025 376 aa27.6■■■□□ 2.01
SMARCC1-203ENST00000454240 ACADVLP49748 655 aa27.6■■■□□ 2.01
SMARCC1-203ENST00000454240 CTSCP53634 463 aa27.6■■■□□ 2.01
SMARCC1-203ENST00000454240 ACTR1AP61163 376 aa27.6■■■□□ 2.01
SMARCC1-203ENST00000454240 PRAMEP78395 509 aa27.6■■■□□ 2.01
SMARCC1-203ENST00000454240 B4GALNT1Q00973 533 aa27.6■■■□□ 2.01
SMARCC1-203ENST00000454240 N4BP2L1Q5TBK1 243 aaPredicted RBP27.6■■■□□ 2.01
SMARCC1-203ENST00000454240 CRTC3Q6UUV7 619 aa27.6■■■□□ 2.01
SMARCC1-203ENST00000454240 C11orf96Q7Z7L8 435 aa27.6■■■□□ 2.01
SMARCC1-203ENST00000454240 AGGF1Q8N302 714 aaeCLIP27.6■■■□□ 2.01
SMARCC1-203ENST00000454240 OR4L1Q8NH43 312 aa27.6■■■□□ 2.01
SMARCC1-203ENST00000454240 HEXDCQ8WVB3 486 aa27.6■■■□□ 2.01
SMARCC1-203ENST00000454240 MFSD3Q96ES6 412 aa27.6■■■□□ 2.01
SMARCC1-203ENST00000454240 SNF8Q96H20 258 aa27.6■■■□□ 2.01
SMARCC1-203ENST00000454240 SIGLEC10Q96LC7 697 aa27.6■■■□□ 2.01
SMARCC1-203ENST00000454240 COPS8Q99627 209 aa27.6■■■□□ 2.01
SMARCC1-203ENST00000454240 ERP44Q9BS26 406 aa27.6■■■□□ 2.01
SMARCC1-203ENST00000454240 TRIM31Q9BZY9 425 aa27.6■■■□□ 2.01
SMARCC1-203ENST00000454240 DPEP2Q9H4A9 486 aa27.6■■■□□ 2.01
SMARCC1-203ENST00000454240 SLC23A2Q9UGH3 650 aa27.6■■■□□ 2.01
SMARCC1-203ENST00000454240 TP73O15350 636 aa27.59■■■□□ 2.01
SMARCC1-203ENST00000454240 CLCNKAP51800 687 aa27.59■■■□□ 2.01
SMARCC1-203ENST00000454240 DAB2P98082 770 aa27.59■■■□□ 2.01
SMARCC1-203ENST00000454240 TMEM220Q6QAJ8 160 aa27.59■■■□□ 2.01
SMARCC1-203ENST00000454240 TAS2R42Q7RTR8 314 aa27.59■■■□□ 2.01
SMARCC1-203ENST00000454240 ARL10Q8N8L6 244 aa27.59■■■□□ 2.01
SMARCC1-203ENST00000454240 GPR156Q8NFN8 814 aa27.59■■■□□ 2.01
SMARCC1-203ENST00000454240 OR6P1Q8NGX9 317 aa27.59■■■□□ 2.01
SMARCC1-203ENST00000454240 CCDC97Q96F63 343 aaPredicted RBP27.59■■■□□ 2.01
SMARCC1-203ENST00000454240 ZNF514Q96K75 400 aaPredicted RBP27.59■■■□□ 2.01
SMARCC1-203ENST00000454240 TIMM29Q9BSF4 260 aa27.59■■■□□ 2.01
SMARCC1-203ENST00000454240 SIRPGQ9P1W8 387 aa27.59■■■□□ 2.01
SMARCC1-203ENST00000454240 APOBEC2Q9Y235 224 aaKnown RBP27.59■■■□□ 2.01
SMARCC1-203ENST00000454240 PCDHGA1Q9Y5H4 931 aa27.59■■■□□ 2.01
SMARCC1-203ENST00000454240 PIKFYVEQ9Y2I7 2098 aa27.59■■■□□ 2.01
SMARCC1-203ENST00000454240 NOBOXO60393 691 aa27.58■■■□□ 2.01
SMARCC1-203ENST00000454240 RALBP11234 206 aa27.58■■■□□ 2.01
SMARCC1-203ENST00000454240 ZNF7P17097 686 aaPredicted RBP27.58■■■□□ 2.01
SMARCC1-203ENST00000454240 RPL21P46778 160 aaKnown RBP27.58■■■□□ 2.01
SMARCC1-203ENST00000454240 RPIAP49247 311 aa27.58■■■□□ 2.01
SMARCC1-203ENST00000454240 DUSP3P51452 185 aaPredicted RBP27.58■■■□□ 2.01
SMARCC1-203ENST00000454240 ITGA8P53708 1063 aa27.58■■■□□ 2.01
SMARCC1-203ENST00000454240 NR0B2Q15466 257 aa27.58■■■□□ 2.01
SMARCC1-203ENST00000454240 DBN1Q16643 649 aa27.58■■■□□ 2.01
SMARCC1-203ENST00000454240 CASC4Q6P4E1 433 aa27.58■■■□□ 2.01
SMARCC1-203ENST00000454240 CES3Q6UWW8 571 aa27.58■■■□□ 2.01
SMARCC1-203ENST00000454240 TRAPPC5Q8IUR0 188 aa27.58■■■□□ 2.01
SMARCC1-203ENST00000454240 KYQ8NBH2 561 aa27.58■■■□□ 2.01
SMARCC1-203ENST00000454240 SGF29Q96ES7 293 aa27.58■■■□□ 2.01
SMARCC1-203ENST00000454240 DCUN1D1Q96GG9 259 aa27.58■■■□□ 2.01
SMARCC1-203ENST00000454240 EVA1BQ9NVM1 165 aa27.58■■■□□ 2.01
SMARCC1-203ENST00000454240 SAMD15Q9P1V8 674 aa27.58■■■□□ 2.01
SMARCC1-203ENST00000454240 GULP1Q9UBP9 304 aa27.58■■■□□ 2.01
SMARCC1-203ENST00000454240 KCNK6Q9Y257 313 aa27.58■■■□□ 2.01
SMARCC1-203ENST00000454240 SNX24Q9Y343 169 aa27.58■■■□□ 2.01
SMARCC1-203ENST00000454240 DNMT3AQ9Y6K1 912 aaPredicted RBP27.58■■■□□ 2.01
SMARCC1-203ENST00000454240 FAM237BA0A1B0GVD1 139 aa27.57■■■□□ 2
SMARCC1-203ENST00000454240 EME2A4GXA9 379 aaPredicted RBP27.57■■■□□ 2
SMARCC1-203ENST00000454240 PRR19A6NJB7 356 aa27.57■■■□□ 2
SMARCC1-203ENST00000454240 OR2AG2A6NM03 316 aa27.57■■■□□ 2
SMARCC1-203ENST00000454240 SGTAO43765 313 aa27.57■■■□□ 2
SMARCC1-203ENST00000454240 ARNTP27540 789 aa27.57■■■□□ 2
SMARCC1-203ENST00000454240 FNBP1LQ5T0N5 605 aa27.57■■■□□ 2
SMARCC1-203ENST00000454240 ERMP1Q7Z2K6 904 aa27.57■■■□□ 2
SMARCC1-203ENST00000454240 TMEM135Q86UB9 458 aa27.57■■■□□ 2
SMARCC1-203ENST00000454240 C17orf82Q86X59 251 aaPredicted RBP27.57■■■□□ 2
SMARCC1-203ENST00000454240 SFTPA2Q8IWL1 248 aa27.57■■■□□ 2
SMARCC1-203ENST00000454240 ZDHHC1Q8WTX9 485 aa27.57■■■□□ 2
SMARCC1-203ENST00000454240 KLC4Q9NSK0 619 aa27.57■■■□□ 2
SMARCC1-203ENST00000454240 B4DGG1 531 aa27.56■■■□□ 2
SMARCC1-203ENST00000454240 CFAP99D6REC4 459 aa27.56■■■□□ 2
SMARCC1-203ENST00000454240 ATP1B2P14415 290 aaPredicted RBP27.56■■■□□ 2
SMARCC1-203ENST00000454240 ILKQ13418 452 aa27.56■■■□□ 2
SMARCC1-203ENST00000454240 ITIH4Q14624 930 aa27.56■■■□□ 2
SMARCC1-203ENST00000454240 INSCQ1MX18 579 aa27.56■■■□□ 2
SMARCC1-203ENST00000454240 PLA2G4EQ3MJ16 856 aa27.56■■■□□ 2
SMARCC1-203ENST00000454240 LYPLAL1Q5VWZ2 237 aa27.56■■■□□ 2
SMARCC1-203ENST00000454240 DUPD1Q68J44 220 aa27.56■■■□□ 2
SMARCC1-203ENST00000454240 CERS6Q6ZMG9 384 aa27.56■■■□□ 2
SMARCC1-203ENST00000454240 DET1Q7L5Y6 550 aa27.56■■■□□ 2
SMARCC1-203ENST00000454240 TBRG4Q969Z0 631 aaKnown RBP eCLIP27.56■■■□□ 2
SMARCC1-203ENST00000454240 TRIM56Q9BRZ2 755 aaKnown RBP27.56■■■□□ 2
SMARCC1-203ENST00000454240 ANAPC5Q9UJX4 755 aa27.56■■■□□ 2
SMARCC1-203ENST00000454240 PADI4Q9UM07 663 aa27.56■■■□□ 2
SMARCC1-203ENST00000454240 ASXL3Q9C0F0 2248 aa27.56■■■□□ 2
SMARCC1-203ENST00000454240 NDC80O14777 642 aa27.55■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms