RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 DLX3O60479 287 aa5.93□□□□□ -1.46
SDC4P-201ENST00000453285 VPS26AO75436 327 aa5.93□□□□□ -1.46
SDC4P-201ENST00000453285 RNASEH2AO75792 299 aaKnown RBP5.93□□□□□ -1.46
SDC4P-201ENST00000453285 SLC25A14O95258 325 aaPredicted RBP5.93□□□□□ -1.46
SDC4P-201ENST00000453285 FAM107AO95990 144 aa5.93□□□□□ -1.46
SDC4P-201ENST00000453285 DNTTP04053 509 aa5.93□□□□□ -1.46
SDC4P-201ENST00000453285 APOA4P06727 396 aa5.93□□□□□ -1.46
SDC4P-201ENST00000453285 PYGLP06737 847 aa5.93□□□□□ -1.46
SDC4P-201ENST00000453285 CPA3P15088 417 aa5.93□□□□□ -1.46
SDC4P-201ENST00000453285 GABRG2P18507 467 aa5.93□□□□□ -1.46
SDC4P-201ENST00000453285 CHRM3P20309 590 aa5.93□□□□□ -1.46
SDC4P-201ENST00000453285 BGNP21810 368 aa5.93□□□□□ -1.46
SDC4P-201ENST00000453285 TARSP26639 723 aaKnown RBP5.93□□□□□ -1.46
SDC4P-201ENST00000453285 SKIV2L2P42285 1042 aaKnown RBP5.93□□□□□ -1.46
SDC4P-201ENST00000453285 NSG1P42857 185 aa5.93□□□□□ -1.46
SDC4P-201ENST00000453285 GLRBP48167 497 aa5.93□□□□□ -1.46
SDC4P-201ENST00000453285 ZBTB16Q05516 673 aa5.93□□□□□ -1.46
SDC4P-201ENST00000453285 PDAP1Q13442 181 aaKnown RBP5.93□□□□□ -1.46
SDC4P-201ENST00000453285 FGL2Q14314 439 aa5.93□□□□□ -1.46
SDC4P-201ENST00000453285 GAS6Q14393 721 aa5.93□□□□□ -1.46
SDC4P-201ENST00000453285 GBX1Q14549 363 aa5.93□□□□□ -1.46
SDC4P-201ENST00000453285 STARD3Q14849 445 aa5.93□□□□□ -1.46
SDC4P-201ENST00000453285 ACAP2Q15057 778 aa5.93□□□□□ -1.46
SDC4P-201ENST00000453285 CRY1Q16526 586 aa5.93□□□□□ -1.46
SDC4P-201ENST00000453285 TSNAXIP1Q2TAA8 658 aa5.93□□□□□ -1.46
SDC4P-201ENST00000453285 WSCD2Q2TBF2 565 aa5.93□□□□□ -1.46
SDC4P-201ENST00000453285 ZNF284Q2VY69 593 aa5.93□□□□□ -1.46
SDC4P-201ENST00000453285 ZNF648Q5T619 568 aaPredicted RBP5.93□□□□□ -1.46
SDC4P-201ENST00000453285 AGAP9Q5VTM2 703 aa5.93□□□□□ -1.46
SDC4P-201ENST00000453285 PTRHD1Q6GMV3 140 aaKnown RBP5.93□□□□□ -1.46
SDC4P-201ENST00000453285 CGB2Q6NT52 195 aa5.93□□□□□ -1.46
SDC4P-201ENST00000453285 ZYG11AQ6WRX3 759 aa5.93□□□□□ -1.46
SDC4P-201ENST00000453285 CYHR1Q6ZMK1 362 aa5.93□□□□□ -1.46
SDC4P-201ENST00000453285 ZNF852Q6ZMS4 543 aa5.93□□□□□ -1.46
SDC4P-201ENST00000453285 Q6ZS52 159 aa5.93□□□□□ -1.46
SDC4P-201ENST00000453285 PIGWQ7Z7B1 504 aa5.93□□□□□ -1.46
SDC4P-201ENST00000453285 TBC1D1Q86TI0 1168 aaPredicted RBP5.93□□□□□ -1.46
SDC4P-201ENST00000453285 TAX1BP1Q86VP1 789 aa5.93□□□□□ -1.46
SDC4P-201ENST00000453285 CACUL1Q86Y37 369 aa5.93□□□□□ -1.46
SDC4P-201ENST00000453285 NUDCD3Q8IVD9 361 aa5.93□□□□□ -1.46
SDC4P-201ENST00000453285 C10orf107Q8IVU9 208 aa5.93□□□□□ -1.46
SDC4P-201ENST00000453285 SIDT2Q8NBJ9 832 aaKnown RBP5.93□□□□□ -1.46
SDC4P-201ENST00000453285 PLA2G15Q8NCC3 412 aa5.93□□□□□ -1.46
SDC4P-201ENST00000453285 MAFAQ8NHW3 353 aaPredicted RBP5.93□□□□□ -1.46
SDC4P-201ENST00000453285 RDH11Q8TC12 318 aa5.93□□□□□ -1.46
SDC4P-201ENST00000453285 LRRC8CQ8TDW0 803 aa5.93□□□□□ -1.46
SDC4P-201ENST00000453285 CXorf40AQ8TE69 158 aa5.93□□□□□ -1.46
SDC4P-201ENST00000453285 EEF1AKMT1Q8WVE0 214 aa5.93□□□□□ -1.46
SDC4P-201ENST00000453285 INPP5DQ92835 1189 aa5.93□□□□□ -1.46
SDC4P-201ENST00000453285 GLYATL1Q969I3 302 aa5.93□□□□□ -1.46
SDC4P-201ENST00000453285 PTERQ96BW5 349 aa5.93□□□□□ -1.46
SDC4P-201ENST00000453285 FAM136AQ96C01 138 aa5.93□□□□□ -1.46
SDC4P-201ENST00000453285 NUS1Q96E22 293 aa5.93□□□□□ -1.46
SDC4P-201ENST00000453285 PDLIM5Q96HC4 596 aaKnown RBP5.93□□□□□ -1.46
SDC4P-201ENST00000453285 MRGPRX1Q96LB2 322 aa5.93□□□□□ -1.46
SDC4P-201ENST00000453285 COPS8Q99627 209 aa5.93□□□□□ -1.46
SDC4P-201ENST00000453285 MRPL57Q9BQC6 102 aaKnown RBP5.93□□□□□ -1.46
SDC4P-201ENST00000453285 C1QTNF2Q9BXJ5 285 aa5.93□□□□□ -1.46
SDC4P-201ENST00000453285 UNKQ9C0B0 810 aaKnown RBP5.93□□□□□ -1.46
SDC4P-201ENST00000453285 C20orf27Q9GZN8 174 aa5.93□□□□□ -1.46
SDC4P-201ENST00000453285 DERL2Q9GZP9 239 aa5.93□□□□□ -1.46
SDC4P-201ENST00000453285 CLPBQ9H078 707 aa5.93□□□□□ -1.46
SDC4P-201ENST00000453285 CCDC68Q9H2F9 335 aa5.93□□□□□ -1.46
SDC4P-201ENST00000453285 RABEP2Q9H5N1 569 aa5.93□□□□□ -1.46
SDC4P-201ENST00000453285 TFB2MQ9H5Q4 396 aaKnown RBP5.93□□□□□ -1.46
SDC4P-201ENST00000453285 MANSC1Q9H8J5 431 aa5.93□□□□□ -1.46
SDC4P-201ENST00000453285 ZNF395Q9H8N7 513 aaPredicted RBP5.93□□□□□ -1.46
SDC4P-201ENST00000453285 LMAN1LQ9HAT1 526 aa5.93□□□□□ -1.46
SDC4P-201ENST00000453285 SYTL2Q9HCH5 934 aa5.93□□□□□ -1.46
SDC4P-201ENST00000453285 SLCO1B3Q9NPD5 702 aa5.93□□□□□ -1.46
SDC4P-201ENST00000453285 CD93Q9NPY3 652 aa5.93□□□□□ -1.46
SDC4P-201ENST00000453285 C2orf42Q9NWW7 574 aa5.93□□□□□ -1.46
SDC4P-201ENST00000453285 CPSF2Q9P2I0 782 aaKnown RBP5.93□□□□□ -1.46
SDC4P-201ENST00000453285 XPR1Q9UBH6 696 aa5.93□□□□□ -1.46
SDC4P-201ENST00000453285 WNT16Q9UBV4 365 aa5.93□□□□□ -1.46
SDC4P-201ENST00000453285 GNPTGQ9UJJ9 305 aa5.93□□□□□ -1.46
SDC4P-201ENST00000453285 CA14Q9ULX7 337 aa5.93□□□□□ -1.46
SDC4P-201ENST00000453285 SCML1Q9UN30 329 aa5.93□□□□□ -1.46
SDC4P-201ENST00000453285 NDRG2Q9UN36 371 aaKnown RBP5.93□□□□□ -1.46
SDC4P-201ENST00000453285 SORCS3Q9UPU3 1222 aa5.93□□□□□ -1.46
SDC4P-201ENST00000453285 COL6A3P12111 3177 aa5.92□□□□□ -1.46
SDC4P-201ENST00000453285 NEMP1O14524 444 aa5.92□□□□□ -1.46
SDC4P-201ENST00000453285 ITM2AO43736 263 aa5.92□□□□□ -1.46
SDC4P-201ENST00000453285 EDF1O60869 148 aaKnown RBP5.92□□□□□ -1.46
SDC4P-201ENST00000453285 LILRB5O75023 590 aa5.92□□□□□ -1.46
SDC4P-201ENST00000453285 SNNO75324 88 aaPredicted RBP5.92□□□□□ -1.46
SDC4P-201ENST00000453285 MTX2O75431 263 aa5.92□□□□□ -1.46
SDC4P-201ENST00000453285 TM7SF2O76062 418 aa5.92□□□□□ -1.46
SDC4P-201ENST00000453285 AP2A2O94973 939 aa5.92□□□□□ -1.46
SDC4P-201ENST00000453285 PCDH8O95206 1070 aa5.92□□□□□ -1.46
SDC4P-201ENST00000453285 VIMP08670 466 aaKnown RBP5.92□□□□□ -1.46
SDC4P-201ENST00000453285 RBP1P09455 135 aa5.92□□□□□ -1.46
SDC4P-201ENST00000453285 MTHFD2P13995 350 aa5.92□□□□□ -1.46
SDC4P-201ENST00000453285 ATP1B2P14415 290 aaPredicted RBP5.92□□□□□ -1.46
SDC4P-201ENST00000453285 ITGB6P18564 788 aa5.92□□□□□ -1.46
SDC4P-201ENST00000453285 NDUFV2P19404 249 aa5.92□□□□□ -1.46
SDC4P-201ENST00000453285 TFEBP19484 476 aa5.92□□□□□ -1.46
SDC4P-201ENST00000453285 AOAHP28039 575 aa5.92□□□□□ -1.46
SDC4P-201ENST00000453285 TEAD1P28347 426 aa5.92□□□□□ -1.46
SDC4P-201ENST00000453285 ARRB2P32121 409 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms