RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 LNP1A1A4G5 178 aa4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 MAGEB16A2A368 324 aa4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 C2orf78A6NCI8 922 aa4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 SPECC1L-ADORA2AF8WAN1 911 aa4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 CYR61O00622 381 aa4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 WNT10BO00744 389 aa4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 LRRTM2O43300 516 aa4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 HCRTR2O43614 444 aa4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 TLX2O43763 284 aaPredicted RBP4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 DNAJB6O75190 326 aa4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 TOM1L1O75674 476 aa4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 CDKL5O76039 1030 aa4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 HAUS5O94927 633 aa4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 MFN2O95140 757 aa4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 AGTP01019 485 aa4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 IL1BP01584 269 aa4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 IGHEP01854 428 aa4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 CSF1RP07333 972 aa4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 ENO2P09104 434 aaPredicted RBP4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 G6PDP11413 515 aa4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 GJA1P17302 382 aa4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 ATP5JP18859 108 aa4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 GNAZP19086 355 aa4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 HOXA5P20719 270 aa4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 CD72P21854 359 aa4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 FDXRP22570 491 aa4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 DNASE1P24855 282 aa4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 ADRA1DP25100 572 aa4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 CHMLP26374 656 aa4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 KLRC2P26717 231 aa4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 CDC25CP30307 473 aa4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 SLC6A4P31645 630 aa4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 THBS2P35442 1172 aa4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 IGHMBP2P38935 993 aaKnown RBP4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 CETN2P41208 172 aa4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 STARP49675 285 aa4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 ADCY7P51828 1080 aa4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 PTTG1IPP53801 180 aa4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 PLTPP55058 493 aa4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 LILRA4P59901 499 aa4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 ACSM1Q08AH1 577 aa4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 MTX1Q13505 466 aa4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 BFSP2Q13515 415 aa4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 FHL3Q13643 280 aa4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 PCOLCEQ15113 449 aa4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 AP5B1Q2VPB7 878 aa4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 ZIK1Q3SY52 487 aaPredicted RBP4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 IQCCQ4KMZ1 466 aa4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 LDLRAP1Q5SW96 308 aa4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 TTC19Q6DKK2 380 aaPredicted RBP4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 TMEM211Q6ICI0 200 aa4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 CAPRIN2Q6IMN6 1127 aaKnown RBP4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 CCDC144NLQ6NUI1 221 aa4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 CD300LDQ6UXZ3 194 aa4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 PRSS42Q7Z5A4 293 aa4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 RTN4RL2Q86UN3 420 aa4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 SLC7A5P1Q8MH63 180 aa4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 LILRA3Q8N6C8 439 aaPredicted RBP4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 L3MBTL4Q8NA19 623 aa4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 SYT8Q8NBV8 401 aa4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 BBS1Q8NFJ9 593 aa4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 OR9A1PQ8NGU1 263 aa4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 OR52J3Q8NH60 311 aa4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 C9orf43Q8TAL5 461 aaPredicted RBP4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 FEZF2Q8TBJ5 459 aa4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 CLEC4CQ8WTT0 213 aa4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 HEXDCQ8WVB3 486 aa4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 OVCA2Q8WZ82 227 aa4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 ST6GALNAC6Q969X2 333 aa4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 MOAP1Q96BY2 351 aa4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 ARHGEF26Q96DR7 871 aa4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 MSANTD3Q96H12 275 aa4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 ZBTB45Q96K62 511 aaPredicted RBP4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 RPGRIP1Q96KN7 1286 aa4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 GORASP1Q9BQQ3 440 aa4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 ZNF577Q9BSK1 485 aa4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 H2AFJQ9BTM1 129 aa4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 GON7Q9BXV9 100 aa4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 MMP27Q9H306 513 aa4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 C12orf65Q9H3J6 166 aaKnown RBP4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 PDZD7Q9H5P4 517 aa4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 METTL7AQ9H8H3 244 aa4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 ANKZF1Q9H8Y5 726 aa4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 KCNK13Q9HB14 408 aa4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 GBA2Q9HCG7 927 aaPredicted RBP4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 SLC6A13Q9NSD5 602 aa4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 PANK4Q9NVE7 773 aa4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 ETNK2Q9NVF9 386 aa4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 PAG1Q9NWQ8 432 aa4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 BABAM1Q9NWV8 329 aa4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 BARHL2Q9NY43 387 aa4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 DTLQ9NZJ0 730 aa4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 OR6C3Q9NZP0 311 aa4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 SPATA7Q9P0W8 599 aa4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 KLHL8Q9P2G9 620 aaPredicted RBP4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 KLQ9UEF7 1012 aa4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 IL17BQ9UHF5 180 aa4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 VPS4AQ9UN37 437 aa4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 EXO1Q9UQ84 846 aaKnown RBP4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms