RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 SYCE1Q8N0S2 351 aa19.12■□□□□ 0.65
USP40-207ENST00000450940 TXLNBQ8N3L3 684 aa19.12■□□□□ 0.65
USP40-207ENST00000450940 OR10G6Q8NH81 332 aa19.12■□□□□ 0.65
USP40-207ENST00000450940 BLOC1S5Q8TDH9 187 aa19.12■□□□□ 0.65
USP40-207ENST00000450940 USP7Q93009 1102 aa19.12■□□□□ 0.65
USP40-207ENST00000450940 FSD1LQ9BXM9 530 aa19.12■□□□□ 0.65
USP40-207ENST00000450940 LDHAL6BQ9BYZ2 381 aaPredicted RBP19.12■□□□□ 0.65
USP40-207ENST00000450940 STN1Q9H668 368 aaKnown RBP19.12■□□□□ 0.65
USP40-207ENST00000450940 UCK1Q9HA47 277 aa19.12■□□□□ 0.65
USP40-207ENST00000450940 PRDM8Q9NQV8 689 aa19.12■□□□□ 0.65
USP40-207ENST00000450940 CPNE7Q9UBL6 633 aa19.12■□□□□ 0.65
USP40-207ENST00000450940 AAR2Q9Y312 384 aaKnown RBP19.12■□□□□ 0.65
USP40-207ENST00000450940 PRAMEF33A0A0G2JMD5 474 aa19.11■□□□□ 0.65
USP40-207ENST00000450940 MIF4GDA9UHW6 222 aaKnown RBP19.11■□□□□ 0.65
USP40-207ENST00000450940 IQCJ-SCHIP1C9J366 451 aaPredicted RBP19.11■□□□□ 0.65
USP40-207ENST00000450940 K7ENP7 123 aa19.11■□□□□ 0.65
USP40-207ENST00000450940 GAPDHSO14556 408 aaPredicted RBP19.11■□□□□ 0.65
USP40-207ENST00000450940 SNX2O60749 519 aa19.11■□□□□ 0.65
USP40-207ENST00000450940 PRAMEF10O60809 474 aa19.11■□□□□ 0.65
USP40-207ENST00000450940 MTX2O75431 263 aa19.11■□□□□ 0.65
USP40-207ENST00000450940 FGF3P11487 239 aaPredicted RBP19.11■□□□□ 0.65
USP40-207ENST00000450940 CCL4P13236 92 aa19.11■□□□□ 0.65
USP40-207ENST00000450940 CD82P27701 267 aa19.11■□□□□ 0.65
USP40-207ENST00000450940 KIF5AQ12840 1032 aa19.11■□□□□ 0.65
USP40-207ENST00000450940 MSLNQ13421 630 aaPredicted RBP19.11■□□□□ 0.65
USP40-207ENST00000450940 CHRNA6Q15825 494 aa19.11■□□□□ 0.65
USP40-207ENST00000450940 DARS2Q6PI48 645 aaKnown RBP19.11■□□□□ 0.65
USP40-207ENST00000450940 INO80CQ6PI98 192 aaPredicted RBP19.11■□□□□ 0.65
USP40-207ENST00000450940 CRTC3Q6UUV7 619 aa19.11■□□□□ 0.65
USP40-207ENST00000450940 ABRAXAS1Q6UWZ7 409 aa19.11■□□□□ 0.65
USP40-207ENST00000450940 WASH2PQ6VEQ5 465 aa19.11■□□□□ 0.65
USP40-207ENST00000450940 PEX26Q7Z412 305 aa19.11■□□□□ 0.65
USP40-207ENST00000450940 GLT6D1Q7Z4J2 308 aa19.11■□□□□ 0.65
USP40-207ENST00000450940 ZNF761Q86XN6 746 aaPredicted RBP19.11■□□□□ 0.65
USP40-207ENST00000450940 RCBTB1Q8NDN9 531 aa19.11■□□□□ 0.65
USP40-207ENST00000450940 SPATA13Q96N96 652 aa19.11■□□□□ 0.65
USP40-207ENST00000450940 EPB41L1Q9H4G0 881 aa19.11■□□□□ 0.65
USP40-207ENST00000450940 WASH6PQ9NQA3 447 aa19.11■□□□□ 0.65
USP40-207ENST00000450940 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.11■□□□□ 0.65
USP40-207ENST00000450940 TMEM9Q9P0T7 183 aa19.11■□□□□ 0.65
USP40-207ENST00000450940 PCDHGA3Q9Y5H0 932 aa19.11■□□□□ 0.65
USP40-207ENST00000450940 SMG1Q96Q15 3661 aaKnown RBP19.11■□□□□ 0.65
USP40-207ENST00000450940 A0A0U1RQJ8 604 aa19.1■□□□□ 0.65
USP40-207ENST00000450940 LILRA5A6NI73 299 aa19.1■□□□□ 0.65
USP40-207ENST00000450940 KCNN4O15554 427 aa19.1■□□□□ 0.65
USP40-207ENST00000450940 EFSO43281 561 aa19.1■□□□□ 0.65
USP40-207ENST00000450940 DUX1O43812 170 aa19.1■□□□□ 0.65
USP40-207ENST00000450940 KCNJ13O60928 360 aa19.1■□□□□ 0.65
USP40-207ENST00000450940 STK10O94804 968 aaKnown RBP19.1■□□□□ 0.65
USP40-207ENST00000450940 LIPCP11150 499 aa19.1■□□□□ 0.65
USP40-207ENST00000450940 RHDQ02161 417 aa19.1■□□□□ 0.65
USP40-207ENST00000450940 NFATC2Q13469 925 aa19.1■□□□□ 0.65
USP40-207ENST00000450940 INSCQ1MX18 579 aa19.1■□□□□ 0.65
USP40-207ENST00000450940 LDLRAP1Q5SW96 308 aa19.1■□□□□ 0.65
USP40-207ENST00000450940 ARHGAP40Q5TG30 622 aa19.1■□□□□ 0.65
USP40-207ENST00000450940 AGAP9Q5VTM2 703 aa19.1■□□□□ 0.65
USP40-207ENST00000450940 ARHGAP22Q7Z5H3 698 aa19.1■□□□□ 0.65
USP40-207ENST00000450940 DTX1Q86Y01 620 aa19.1■□□□□ 0.65
USP40-207ENST00000450940 UBL4BQ8N7F7 174 aa19.1■□□□□ 0.65
USP40-207ENST00000450940 AGBL5Q8NDL9 886 aa19.1■□□□□ 0.65
USP40-207ENST00000450940 DDHD1Q8NEL9 900 aa19.1■□□□□ 0.65
USP40-207ENST00000450940 WBP1Q96G27 269 aa19.1■□□□□ 0.65
USP40-207ENST00000450940 AHCYL2Q96HN2 611 aaKnown RBP19.1■□□□□ 0.65
USP40-207ENST00000450940 PPP1R2P1Q96PQ5 205 aa19.1■□□□□ 0.65
USP40-207ENST00000450940 CCNL2Q96S94 520 aaPredicted RBP19.1■□□□□ 0.65
USP40-207ENST00000450940 FAM118BQ9BPY3 351 aa19.1■□□□□ 0.65
USP40-207ENST00000450940 C19orf43Q9BQ61 176 aa19.1■□□□□ 0.65
USP40-207ENST00000450940 FICDQ9BVA6 458 aa19.1■□□□□ 0.65
USP40-207ENST00000450940 ARNT2Q9HBZ2 717 aa19.1■□□□□ 0.65
USP40-207ENST00000450940 SMOXQ9NWM0 555 aa19.1■□□□□ 0.65
USP40-207ENST00000450940 FOXJ2Q9P0K8 574 aa19.1■□□□□ 0.65
USP40-207ENST00000450940 SCHIP1Q9P0W5 487 aaPredicted RBP19.1■□□□□ 0.65
USP40-207ENST00000450940 ZNF624Q9P2J8 865 aaPredicted RBP19.1■□□□□ 0.65
USP40-207ENST00000450940 TRIM10Q9UDY6 481 aa19.1■□□□□ 0.65
USP40-207ENST00000450940 PKP3Q9Y446 797 aa19.1■□□□□ 0.65
USP40-207ENST00000450940 SDK2Q58EX2 2172 aa19.1■□□□□ 0.65
USP40-207ENST00000450940 GLYATL1P3A0A0U1RQE8 302 aa19.09■□□□□ 0.65
USP40-207ENST00000450940 MACROD2A1Z1Q3 448 aa19.09■□□□□ 0.65
USP40-207ENST00000450940 C5orf60A6NFR6 353 aa19.09■□□□□ 0.65
USP40-207ENST00000450940 DDX3YO15523 660 aaKnown RBP19.09■□□□□ 0.65
USP40-207ENST00000450940 UGT1A9O60656 530 aa19.09■□□□□ 0.65
USP40-207ENST00000450940 UGT1A6P19224 532 aa19.09■□□□□ 0.65
USP40-207ENST00000450940 UGT1A1P22309 533 aa19.09■□□□□ 0.65
USP40-207ENST00000450940 UGT1A4P22310 534 aa19.09■□□□□ 0.65
USP40-207ENST00000450940 PSMB4P28070 264 aa19.09■□□□□ 0.65
USP40-207ENST00000450940 CA5AP35218 305 aa19.09■□□□□ 0.65
USP40-207ENST00000450940 UGT1A3P35503 534 aa19.09■□□□□ 0.65
USP40-207ENST00000450940 SLC19A1P41440 591 aa19.09■□□□□ 0.65
USP40-207ENST00000450940 MAPK10P53779 464 aa19.09■□□□□ 0.65
USP40-207ENST00000450940 KLF1Q13351 362 aaPredicted RBP19.09■□□□□ 0.65
USP40-207ENST00000450940 ITGA9Q13797 1035 aa19.09■□□□□ 0.65
USP40-207ENST00000450940 PRPSAP1Q14558 356 aa19.09■□□□□ 0.65
USP40-207ENST00000450940 TAF1AQ15573 450 aaPredicted RBP19.09■□□□□ 0.65
USP40-207ENST00000450940 TGIF1Q15583 401 aa19.09■□□□□ 0.65
USP40-207ENST00000450940 TMEM164Q5U3C3 297 aa19.09■□□□□ 0.65
USP40-207ENST00000450940 PCSK4Q6UW60 755 aa19.09■□□□□ 0.65
USP40-207ENST00000450940 RNF10Q8N5U6 811 aaKnown RBP19.09■□□□□ 0.65
USP40-207ENST00000450940 TTC13Q8NBP0 860 aa19.09■□□□□ 0.65
USP40-207ENST00000450940 HES6Q96HZ4 224 aa19.09■□□□□ 0.65
USP40-207ENST00000450940 TAAR9Q96RI9 348 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms