RNA–Protein interactions for RNA: ENST00000449879.5

RAB11FIP3-204, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-204ENST00000449879 AURKAO14965 403 aa16.34■□□□□ 0.21
RAB11FIP3-204ENST00000449879 CHUKO15111 745 aa16.34■□□□□ 0.21
RAB11FIP3-204ENST00000449879 POLR1CO15160 346 aaPredicted RBP16.34■□□□□ 0.21
RAB11FIP3-204ENST00000449879 NKX2-8O15522 239 aa16.34■□□□□ 0.21
RAB11FIP3-204ENST00000449879 PPFIA2O75334 1257 aa16.34■□□□□ 0.21
RAB11FIP3-204ENST00000449879 CDK14O94921 469 aa16.34■□□□□ 0.21
RAB11FIP3-204ENST00000449879 NDST3O95803 873 aa16.34■□□□□ 0.21
RAB11FIP3-204ENST00000449879 VIPP01282 170 aa16.34■□□□□ 0.21
RAB11FIP3-204ENST00000449879 ZNF7P17097 686 aaPredicted RBP16.34■□□□□ 0.21
RAB11FIP3-204ENST00000449879 BPIP17213 487 aa16.34■□□□□ 0.21
RAB11FIP3-204ENST00000449879 TYRP1P17643 537 aa16.34■□□□□ 0.21
RAB11FIP3-204ENST00000449879 XRCC1P18887 633 aaPredicted RBP16.34■□□□□ 0.21
RAB11FIP3-204ENST00000449879 MAP4P27816 1152 aaKnown RBP16.34■□□□□ 0.21
RAB11FIP3-204ENST00000449879 DCDC1P59894 354 aa16.34■□□□□ 0.21
RAB11FIP3-204ENST00000449879 UBE2IP63279 158 aaKnown RBP16.34■□□□□ 0.21
RAB11FIP3-204ENST00000449879 LLGL1Q15334 1064 aa16.34■□□□□ 0.21
RAB11FIP3-204ENST00000449879 SEPT7Q16181 437 aaKnown RBP16.34■□□□□ 0.21
RAB11FIP3-204ENST00000449879 TEX44Q53QW1 395 aa16.34■□□□□ 0.21
RAB11FIP3-204ENST00000449879 LRRC38Q5VT99 294 aa16.34■□□□□ 0.21
RAB11FIP3-204ENST00000449879 ATG14Q6ZNE5 492 aa16.34■□□□□ 0.21
RAB11FIP3-204ENST00000449879 TIPARPQ7Z3E1 657 aaKnown RBP16.34■□□□□ 0.21
RAB11FIP3-204ENST00000449879 LRRTM4Q86VH4 590 aa16.34■□□□□ 0.21
RAB11FIP3-204ENST00000449879 TRIM48Q8IWZ4 208 aa16.34■□□□□ 0.21
RAB11FIP3-204ENST00000449879 RHOT1Q8IXI2 618 aa16.34■□□□□ 0.21
RAB11FIP3-204ENST00000449879 UNC5BQ8IZJ1 945 aa16.34■□□□□ 0.21
RAB11FIP3-204ENST00000449879 KIAA1143Q96AT1 154 aaPredicted RBP16.34■□□□□ 0.21
RAB11FIP3-204ENST00000449879 TADA1Q96BN2 335 aa16.34■□□□□ 0.21
RAB11FIP3-204ENST00000449879 ZPBPQ9BS86 351 aa16.34■□□□□ 0.21
RAB11FIP3-204ENST00000449879 SLC25A18Q9H1K4 315 aa16.34■□□□□ 0.21
RAB11FIP3-204ENST00000449879 EPB41L1Q9H4G0 881 aa16.34■□□□□ 0.21
RAB11FIP3-204ENST00000449879 BPIFA1Q9NP55 256 aa16.34■□□□□ 0.21
RAB11FIP3-204ENST00000449879 ZNF624Q9P2J8 865 aaPredicted RBP16.34■□□□□ 0.21
RAB11FIP3-204ENST00000449879 SAE1Q9UBE0 346 aaPredicted RBP16.34■□□□□ 0.21
RAB11FIP3-204ENST00000449879 TFR2Q9UP52 801 aa16.34■□□□□ 0.21
RAB11FIP3-204ENST00000449879 SPO11Q9Y5K1 396 aa16.34■□□□□ 0.21
RAB11FIP3-204ENST00000449879 LOC101059948A0A1B0GTJ6 334 aa16.33■□□□□ 0.2
RAB11FIP3-204ENST00000449879 LILRA5A6NI73 299 aa16.33■□□□□ 0.2
RAB11FIP3-204ENST00000449879 ZNF891A8MT65 544 aaPredicted RBP16.33■□□□□ 0.2
RAB11FIP3-204ENST00000449879 GPR89AB7ZAQ6 455 aa16.33■□□□□ 0.2
RAB11FIP3-204ENST00000449879 KMOO15229 486 aa16.33■□□□□ 0.2
RAB11FIP3-204ENST00000449879 CAPN5O15484 640 aaPredicted RBP16.33■□□□□ 0.2
RAB11FIP3-204ENST00000449879 SUV39H1O43463 412 aa16.33■□□□□ 0.2
RAB11FIP3-204ENST00000449879 SPOPO43791 374 aa16.33■□□□□ 0.2
RAB11FIP3-204ENST00000449879 STK17BO94768 372 aa16.33■□□□□ 0.2
RAB11FIP3-204ENST00000449879 GPR89BP0CG08 455 aa16.33■□□□□ 0.2
RAB11FIP3-204ENST00000449879 AMD1P17707 334 aa16.33■□□□□ 0.2
RAB11FIP3-204ENST00000449879 RPL10P27635 214 aaKnown RBP16.33■□□□□ 0.2
RAB11FIP3-204ENST00000449879 SLC19A1P41440 591 aa16.33■□□□□ 0.2
RAB11FIP3-204ENST00000449879 GFERP55789 205 aa16.33■□□□□ 0.2
RAB11FIP3-204ENST00000449879 PDPK2PQ6A1A2 396 aa16.33■□□□□ 0.2
RAB11FIP3-204ENST00000449879 MFSD7Q6UXD7 560 aa16.33■□□□□ 0.2
RAB11FIP3-204ENST00000449879 TMEM26Q6ZUK4 368 aa16.33■□□□□ 0.2
RAB11FIP3-204ENST00000449879 TXLNBQ8N3L3 684 aa16.33■□□□□ 0.2
RAB11FIP3-204ENST00000449879 ACRBPQ8NEB7 543 aa16.33■□□□□ 0.2
RAB11FIP3-204ENST00000449879 RNF31Q96EP0 1072 aa16.33■□□□□ 0.2
RAB11FIP3-204ENST00000449879 CALR3Q96L12 384 aaKnown RBP16.33■□□□□ 0.2
RAB11FIP3-204ENST00000449879 DDX56Q9NY93 547 aaKnown RBP16.33■□□□□ 0.2
RAB11FIP3-204ENST00000449879 IL17BQ9UHF5 180 aa16.33■□□□□ 0.2
RAB11FIP3-204ENST00000449879 REXO2Q9Y3B8 237 aaKnown RBP16.33■□□□□ 0.2
RAB11FIP3-204ENST00000449879 SLC30A1Q9Y6M5 507 aa16.33■□□□□ 0.2
RAB11FIP3-204ENST00000449879 VEGFDO43915 354 aa16.32■□□□□ 0.2
RAB11FIP3-204ENST00000449879 UBXN7O94888 489 aa16.32■□□□□ 0.2
RAB11FIP3-204ENST00000449879 PRKAR1AP10644 381 aa16.32■□□□□ 0.2
RAB11FIP3-204ENST00000449879 COMTP21964 271 aa16.32■□□□□ 0.2
RAB11FIP3-204ENST00000449879 PTPN3P26045 913 aa16.32■□□□□ 0.2
RAB11FIP3-204ENST00000449879 CCR10P46092 362 aa16.32■□□□□ 0.2
RAB11FIP3-204ENST00000449879 CSRP3P50461 194 aa16.32■□□□□ 0.2
RAB11FIP3-204ENST00000449879 VAV2P52735 878 aa16.32■□□□□ 0.2
RAB11FIP3-204ENST00000449879 POLE2P56282 527 aa16.32■□□□□ 0.2
RAB11FIP3-204ENST00000449879 FOXM1Q08050 763 aa16.32■□□□□ 0.2
RAB11FIP3-204ENST00000449879 KHDC1Q4VXA5 237 aaKnown RBP16.32■□□□□ 0.2
RAB11FIP3-204ENST00000449879 KAZNQ674X7 775 aa16.32■□□□□ 0.2
RAB11FIP3-204ENST00000449879 C11orf63Q6NUN7 778 aa16.32■□□□□ 0.2
RAB11FIP3-204ENST00000449879 KIAA1328Q86T90 577 aa16.32■□□□□ 0.2
RAB11FIP3-204ENST00000449879 ZNF547Q8IVP9 402 aa16.32■□□□□ 0.2
RAB11FIP3-204ENST00000449879 GDAP1Q8TB36 358 aa16.32■□□□□ 0.2
RAB11FIP3-204ENST00000449879 SLC45A3Q96JT2 553 aa16.32■□□□□ 0.2
RAB11FIP3-204ENST00000449879 C9orf72Q96LT7 481 aa16.32■□□□□ 0.2
RAB11FIP3-204ENST00000449879 TEKT5Q96M29 485 aa16.32■□□□□ 0.2
RAB11FIP3-204ENST00000449879 TGM7Q96PF1 710 aa16.32■□□□□ 0.2
RAB11FIP3-204ENST00000449879 SRPK1Q96SB4 655 aaKnown RBP16.32■□□□□ 0.2
RAB11FIP3-204ENST00000449879 ADNPQ9H2P0 1102 aa16.32■□□□□ 0.2
RAB11FIP3-204ENST00000449879 UCK1Q9HA47 277 aa16.32■□□□□ 0.2
RAB11FIP3-204ENST00000449879 OGFRQ9NZT2 677 aa16.32■□□□□ 0.2
RAB11FIP3-204ENST00000449879 NFKBIL1Q9UBC1 381 aaPredicted RBP16.32■□□□□ 0.2
RAB11FIP3-204ENST00000449879 TRIM10Q9UDY6 481 aa16.32■□□□□ 0.2
RAB11FIP3-204ENST00000449879 TMPRSS11EQ9UL52 423 aa16.32■□□□□ 0.2
RAB11FIP3-204ENST00000449879 MN1Q10571 1320 aaPredicted RBP16.31■□□□□ 0.2
RAB11FIP3-204ENST00000449879 RCCD1A6NED2 376 aa16.31■□□□□ 0.2
RAB11FIP3-204ENST00000449879 GOLGA6L3A6NEY3 463 aa16.31■□□□□ 0.2
RAB11FIP3-204ENST00000449879 BTNL10A8MVZ5 291 aa16.31■□□□□ 0.2
RAB11FIP3-204ENST00000449879 CST8O60676 142 aa16.31■□□□□ 0.2
RAB11FIP3-204ENST00000449879 IDSP22304 550 aa16.31■□□□□ 0.2
RAB11FIP3-204ENST00000449879 NR2C2P49116 596 aa16.31■□□□□ 0.2
RAB11FIP3-204ENST00000449879 SEPHS1P49903 392 aa16.31■□□□□ 0.2
RAB11FIP3-204ENST00000449879 DRG2P55039 364 aaKnown RBP16.31■□□□□ 0.2
RAB11FIP3-204ENST00000449879 TFDP2Q14188 446 aa16.31■□□□□ 0.2
RAB11FIP3-204ENST00000449879 NOMO1Q15155 1222 aa16.31■□□□□ 0.2
RAB11FIP3-204ENST00000449879 SLC14A2Q15849 920 aa16.31■□□□□ 0.2
RAB11FIP3-204ENST00000449879 ATP13A5Q4VNC0 1218 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms