RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 ZCCHC2Q9C0B9 1178 aaKnown RBP13.89□□□□□ -0.19
SHMT2-203ENST00000449049 TMBIM4Q9HC24 238 aa13.89□□□□□ -0.19
SHMT2-203ENST00000449049 GNPTGQ9UJJ9 305 aa13.89□□□□□ -0.19
SHMT2-203ENST00000449049 CEP192Q8TEP8 1941 aa13.89□□□□□ -0.19
SHMT2-203ENST00000449049 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.88□□□□□ -0.19
SHMT2-203ENST00000449049 GOLGA6L10A6NI86 522 aa13.88□□□□□ -0.19
SHMT2-203ENST00000449049 A6NNZ2 444 aa13.88□□□□□ -0.19
SHMT2-203ENST00000449049 MEI4A8MW99 385 aa13.88□□□□□ -0.19
SHMT2-203ENST00000449049 TRIM49D1C9J1S8 452 aa13.88□□□□□ -0.19
SHMT2-203ENST00000449049 H0Y8X5 98 aa13.88□□□□□ -0.19
SHMT2-203ENST00000449049 SGTAO43765 313 aa13.88□□□□□ -0.19
SHMT2-203ENST00000449049 VEGFDO43915 354 aa13.88□□□□□ -0.19
SHMT2-203ENST00000449049 AP2A2O94973 939 aa13.88□□□□□ -0.19
SHMT2-203ENST00000449049 SP9P0CG40 484 aa13.88□□□□□ -0.19
SHMT2-203ENST00000449049 YPEL5P62699 121 aa13.88□□□□□ -0.19
SHMT2-203ENST00000449049 DNAJC3Q13217 504 aa13.88□□□□□ -0.19
SHMT2-203ENST00000449049 HECTD2Q5U5R9 776 aa13.88□□□□□ -0.19
SHMT2-203ENST00000449049 FAM45BPQ6NSW5 357 aa13.88□□□□□ -0.19
SHMT2-203ENST00000449049 TIFABQ6ZNK6 161 aa13.88□□□□□ -0.19
SHMT2-203ENST00000449049 TMEFF1Q8IYR6 380 aa13.88□□□□□ -0.19
SHMT2-203ENST00000449049 CLDN19Q8N6F1 224 aa13.88□□□□□ -0.19
SHMT2-203ENST00000449049 GPATCH11Q8N954 259 aa13.88□□□□□ -0.19
SHMT2-203ENST00000449049 FAM174AQ8TBP5 190 aa13.88□□□□□ -0.19
SHMT2-203ENST00000449049 FAM45AQ8TCE6 357 aa13.88□□□□□ -0.19
SHMT2-203ENST00000449049 DNASE2BQ8WZ79 361 aa13.88□□□□□ -0.19
SHMT2-203ENST00000449049 NDNQ99608 321 aa13.88□□□□□ -0.19
SHMT2-203ENST00000449049 ZSCAN32Q9NX65 697 aa13.88□□□□□ -0.19
SHMT2-203ENST00000449049 ATXN10Q9UBB4 475 aa13.88□□□□□ -0.19
SHMT2-203ENST00000449049 H3BMM5 538 aa13.88□□□□□ -0.19
SHMT2-203ENST00000449049 RGS16O15492 202 aaPredicted RBP13.88□□□□□ -0.19
SHMT2-203ENST00000449049 OPA1O60313 960 aa13.88□□□□□ -0.19
SHMT2-203ENST00000449049 CD9P21926 228 aa13.88□□□□□ -0.19
SHMT2-203ENST00000449049 CNR2P34972 360 aa13.88□□□□□ -0.19
SHMT2-203ENST00000449049 CSRP3P50461 194 aa13.88□□□□□ -0.19
SHMT2-203ENST00000449049 POU4F1Q01851 419 aa13.88□□□□□ -0.19
SHMT2-203ENST00000449049 SRSF5Q13243 272 aaKnown RBP13.88□□□□□ -0.19
SHMT2-203ENST00000449049 PMS2CLQ68D20 193 aa13.88□□□□□ -0.19
SHMT2-203ENST00000449049 LPCAT2Q7L5N7 544 aa13.88□□□□□ -0.19
SHMT2-203ENST00000449049 RASGEF1AQ8N9B8 481 aa13.88□□□□□ -0.19
SHMT2-203ENST00000449049 ZBTB44Q8NCP5 570 aa13.88□□□□□ -0.19
SHMT2-203ENST00000449049 ELMO2Q96JJ3 720 aa13.88□□□□□ -0.19
SHMT2-203ENST00000449049 CCDC68Q9H2F9 335 aa13.88□□□□□ -0.19
SHMT2-203ENST00000449049 GPR27Q9NS67 375 aa13.88□□□□□ -0.19
SHMT2-203ENST00000449049 MED16Q9Y2X0 877 aa13.88□□□□□ -0.19
SHMT2-203ENST00000449049 GPR89AB7ZAQ6 455 aa13.87□□□□□ -0.19
SHMT2-203ENST00000449049 CACNB4O00305 520 aaPredicted RBP13.87□□□□□ -0.19
SHMT2-203ENST00000449049 QSOX1O00391 747 aa13.87□□□□□ -0.19
SHMT2-203ENST00000449049 HRO43593 1189 aa13.87□□□□□ -0.19
SHMT2-203ENST00000449049 ALDOAP04075 364 aaKnown RBP13.87□□□□□ -0.19
SHMT2-203ENST00000449049 GPR89BP0CG08 455 aa13.87□□□□□ -0.19
SHMT2-203ENST00000449049 FDXRP22570 491 aa13.87□□□□□ -0.19
SHMT2-203ENST00000449049 MAGEA12P43365 314 aa13.87□□□□□ -0.19
SHMT2-203ENST00000449049 RABIFP47224 123 aa13.87□□□□□ -0.19
SHMT2-203ENST00000449049 TIAL1Q01085 375 aaKnown RBP eCLIP13.87□□□□□ -0.197e-9■■□□□ 13.1
SHMT2-203ENST00000449049 NFATC4Q14934 902 aa13.87□□□□□ -0.19
SHMT2-203ENST00000449049 ZKSCAN8Q15776 578 aaPredicted RBP13.87□□□□□ -0.19
SHMT2-203ENST00000449049 PTRHD1Q6GMV3 140 aaKnown RBP13.87□□□□□ -0.19
SHMT2-203ENST00000449049 C1orf216Q8TAB5 229 aa13.87□□□□□ -0.19
SHMT2-203ENST00000449049 KCNJ9Q92806 393 aa13.87□□□□□ -0.19
SHMT2-203ENST00000449049 SLC6A18Q96N87 628 aa13.87□□□□□ -0.19
SHMT2-203ENST00000449049 OLFM1Q99784 485 aa13.87□□□□□ -0.19
SHMT2-203ENST00000449049 OR2AG1Q9H205 316 aa13.87□□□□□ -0.19
SHMT2-203ENST00000449049 EIF2B4Q9UI10 523 aaKnown RBP13.87□□□□□ -0.19
SHMT2-203ENST00000449049 SLC39A10Q9ULF5 831 aa13.87□□□□□ -0.19
SHMT2-203ENST00000449049 VWA7Q9Y334 891 aa13.87□□□□□ -0.19
SHMT2-203ENST00000449049 SLCO1B1Q9Y6L6 691 aa13.87□□□□□ -0.19
SHMT2-203ENST00000449049 TNRC6BQ9UPQ9 1833 aaKnown RBP13.87□□□□□ -0.19
SHMT2-203ENST00000449049 GALR2O43603 387 aaPredicted RBP13.87□□□□□ -0.19
SHMT2-203ENST00000449049 CDK14O94921 469 aa13.87□□□□□ -0.19
SHMT2-203ENST00000449049 OR56A5P0C7T3 313 aa13.87□□□□□ -0.19
SHMT2-203ENST00000449049 KRT15P19012 456 aa13.87□□□□□ -0.19
SHMT2-203ENST00000449049 PRLHRP49683 370 aa13.87□□□□□ -0.19
SHMT2-203ENST00000449049 SERPINB8P50452 374 aa13.87□□□□□ -0.19
SHMT2-203ENST00000449049 CTSCP53634 463 aa13.87□□□□□ -0.19
SHMT2-203ENST00000449049 CDKN2DP55273 166 aa13.87□□□□□ -0.19
SHMT2-203ENST00000449049 TAS2R39P59534 338 aa13.87□□□□□ -0.19
SHMT2-203ENST00000449049 GTF2H3Q13889 308 aa13.87□□□□□ -0.19
SHMT2-203ENST00000449049 PDE1CQ14123 709 aaPredicted RBP13.87□□□□□ -0.19
SHMT2-203ENST00000449049 USP10Q14694 798 aaKnown RBP13.87□□□□□ -0.19
SHMT2-203ENST00000449049 BCL7AQ4VC05 210 aa13.87□□□□□ -0.19
SHMT2-203ENST00000449049 DET1Q7L5Y6 550 aa13.87□□□□□ -0.19
SHMT2-203ENST00000449049 TRABD2AQ86V40 505 aa13.87□□□□□ -0.19
SHMT2-203ENST00000449049 NAT14Q8WUY8 206 aa13.87□□□□□ -0.19
SHMT2-203ENST00000449049 SGF29Q96ES7 293 aa13.87□□□□□ -0.19
SHMT2-203ENST00000449049 CAB39LQ9H9S4 337 aa13.87□□□□□ -0.19
SHMT2-203ENST00000449049 SLC17A4Q9Y2C5 497 aa13.87□□□□□ -0.19
SHMT2-203ENST00000449049 TMEM98Q9Y2Y6 226 aa13.87□□□□□ -0.19
SHMT2-203ENST00000449049 CACNA1IQ9P0X4 2223 aa13.86□□□□□ -0.19
SHMT2-203ENST00000449049 TPP1O14773 563 aa13.86□□□□□ -0.19
SHMT2-203ENST00000449049 CHUKO15111 745 aa13.86□□□□□ -0.19
SHMT2-203ENST00000449049 NUAK1O60285 661 aa13.86□□□□□ -0.19
SHMT2-203ENST00000449049 LILRB5O75023 590 aa13.86□□□□□ -0.19
SHMT2-203ENST00000449049 NIPSNAP2O75323 286 aa13.86□□□□□ -0.19
SHMT2-203ENST00000449049 RFPL1O75677 317 aa13.86□□□□□ -0.19
SHMT2-203ENST00000449049 SYF2O95926 243 aaKnown RBP13.86□□□□□ -0.19
SHMT2-203ENST00000449049 ZNF8P17098 575 aaPredicted RBP13.86□□□□□ -0.19
SHMT2-203ENST00000449049 ATP5DP30049 168 aa13.86□□□□□ -0.19
SHMT2-203ENST00000449049 RACK1P63244 317 aaKnown RBP13.86□□□□□ -0.19
SHMT2-203ENST00000449049 PLK5Q496M5 336 aa13.86□□□□□ -0.19
SHMT2-203ENST00000449049 WDR45BQ5MNZ6 344 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms