RNA–Protein interactions for RNA: ENST00000448967.1

ALS2CR12-208, Transcript of amyotrophic lateral sclerosis 2 chromosome region 12, human

TSL 3

Gene ALS2CR12, Length 721 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ALS2CR12-208	ENST00000448967	C19orf48	Q6RUI8	117 aa		2.57	□□□□□ -2
ALS2CR12-208	ENST00000448967	ABRAXAS1	Q6UWZ7	409 aa		2.57	□□□□□ -2
ALS2CR12-208	ENST00000448967	UNC5D	Q6UXZ4	953 aa		2.57	□□□□□ -2
ALS2CR12-208	ENST00000448967	MFSD6	Q6ZSS7	791 aa		2.57	□□□□□ -2
ALS2CR12-208	ENST00000448967	NFE4	Q86UQ8	179 aa		2.57	□□□□□ -2
ALS2CR12-208	ENST00000448967	CARNMT1	Q8N4J0	409 aa		2.57	□□□□□ -2
ALS2CR12-208	ENST00000448967	NAT8L	Q8N9F0	302 aa		2.57	□□□□□ -2
ALS2CR12-208	ENST00000448967	DMBX1	Q8NFW5	382 aa		2.57	□□□□□ -2
ALS2CR12-208	ENST00000448967	BBS10	Q8TAM1	723 aa		2.57	□□□□□ -2
ALS2CR12-208	ENST00000448967	JAKMIP2	Q96AA8	810 aa		2.57	□□□□□ -2
ALS2CR12-208	ENST00000448967	CENPT	Q96BT3	561 aa		2.57	□□□□□ -2
ALS2CR12-208	ENST00000448967	KLHL29	Q96CT2	875 aa		2.57	□□□□□ -2
ALS2CR12-208	ENST00000448967	KIF1BP	Q96EK5	621 aa		2.57	□□□□□ -2
ALS2CR12-208	ENST00000448967	CMKLR1	Q99788	373 aa		2.57	□□□□□ -2
ALS2CR12-208	ENST00000448967	GPATCH1	Q9BRR8	931 aa	Known RBP	2.57	□□□□□ -2
ALS2CR12-208	ENST00000448967	SUDS3	Q9H7L9	328 aa	Predicted RBP	2.57	□□□□□ -2
ALS2CR12-208	ENST00000448967	PREB	Q9HCU5	417 aa		2.57	□□□□□ -2
ALS2CR12-208	ENST00000448967	ZNF334	Q9HCZ1	680 aa	Predicted RBP	2.57	□□□□□ -2
ALS2CR12-208	ENST00000448967	HAUS2	Q9NVX0	235 aa		2.57	□□□□□ -2
ALS2CR12-208	ENST00000448967	RBM28	Q9NW13	759 aa	Known RBP	2.57	□□□□□ -2
ALS2CR12-208	ENST00000448967	KCND2	Q9NZV8	630 aa		2.57	□□□□□ -2
ALS2CR12-208	ENST00000448967	RAI14	Q9P0K7	980 aa		2.57	□□□□□ -2
ALS2CR12-208	ENST00000448967	RABL2B	Q9UNT1	228 aa		2.57	□□□□□ -2
ALS2CR12-208	ENST00000448967	SMC3	Q9UQE7	1217 aa		2.57	□□□□□ -2
ALS2CR12-208	ENST00000448967	ERVK-11	Q9UQG0	969 aa		2.57	□□□□□ -2
ALS2CR12-208	ENST00000448967	LOXL2	Q9Y4K0	774 aa		2.57	□□□□□ -2
ALS2CR12-208	ENST00000448967	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	2.57	□□□□□ -2
ALS2CR12-208	ENST00000448967	UTY	O14607	1347 aa		2.57	□□□□□ -2
ALS2CR12-208	ENST00000448967	TDRD9	Q8NDG6	1382 aa	Known RBP	2.57	□□□□□ -2
ALS2CR12-208	ENST00000448967	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		2.56	□□□□□ -2
ALS2CR12-208	ENST00000448967	ERI2	A8K979	691 aa	Known RBP	2.56	□□□□□ -2
ALS2CR12-208	ENST00000448967	USP17L23	D6RBM5	183 aa		2.56	□□□□□ -2
ALS2CR12-208	ENST00000448967		H0Y626	953 aa		2.56	□□□□□ -2
ALS2CR12-208	ENST00000448967	RTCA	O00442	366 aa	Known RBP	2.56	□□□□□ -2
ALS2CR12-208	ENST00000448967	CAPN9	O14815	690 aa		2.56	□□□□□ -2
ALS2CR12-208	ENST00000448967	PTP4A3	O75365	173 aa		2.56	□□□□□ -2
ALS2CR12-208	ENST00000448967	SLC22A3	O75751	556 aa		2.56	□□□□□ -2
ALS2CR12-208	ENST00000448967	SEC31A	O94979	1220 aa	Known RBP	2.56	□□□□□ -2
ALS2CR12-208	ENST00000448967	CFC1B	P0CG36	223 aa		2.56	□□□□□ -2
ALS2CR12-208	ENST00000448967	CFC1	P0CG37	223 aa		2.56	□□□□□ -2
ALS2CR12-208	ENST00000448967	THEGL	P0DJG4	465 aa		2.56	□□□□□ -2
ALS2CR12-208	ENST00000448967	MYOD1	P15172	320 aa		2.56	□□□□□ -2
ALS2CR12-208	ENST00000448967	DES	P17661	470 aa		2.56	□□□□□ -2
ALS2CR12-208	ENST00000448967	ATP5D	P30049	168 aa		2.56	□□□□□ -2
ALS2CR12-208	ENST00000448967	CORO1A	P31146	461 aa	Known RBP	2.56	□□□□□ -2
ALS2CR12-208	ENST00000448967	TIMP3	P35625	211 aa		2.56	□□□□□ -2
ALS2CR12-208	ENST00000448967	FMO5	P49326	533 aa		2.56	□□□□□ -2
ALS2CR12-208	ENST00000448967	CASP6	P55212	293 aa		2.56	□□□□□ -2
ALS2CR12-208	ENST00000448967	PITX1	P78337	314 aa	Predicted RBP	2.56	□□□□□ -2
ALS2CR12-208	ENST00000448967	PDE1B	Q01064	536 aa		2.56	□□□□□ -2
ALS2CR12-208	ENST00000448967	PTP4A2	Q12974	167 aa		2.56	□□□□□ -2
ALS2CR12-208	ENST00000448967	ACVR2B	Q13705	512 aa		2.56	□□□□□ -2
ALS2CR12-208	ENST00000448967	E2F5	Q15329	346 aa		2.56	□□□□□ -2
ALS2CR12-208	ENST00000448967	TST	Q16762	297 aa	Known RBP	2.56	□□□□□ -2
ALS2CR12-208	ENST00000448967	C6orf141	Q5SZD1	244 aa		2.56	□□□□□ -2
ALS2CR12-208	ENST00000448967	PLA2G4F	Q68DD2	849 aa		2.56	□□□□□ -2
ALS2CR12-208	ENST00000448967	CNST	Q6PJW8	725 aa		2.56	□□□□□ -2
ALS2CR12-208	ENST00000448967	CCDC73	Q6ZRK6	1079 aa		2.56	□□□□□ -2
ALS2CR12-208	ENST00000448967	MCM10	Q7L590	875 aa		2.56	□□□□□ -2
ALS2CR12-208	ENST00000448967	SLC26A9	Q7LBE3	791 aa		2.56	□□□□□ -2
ALS2CR12-208	ENST00000448967	HAPLN4	Q86UW8	402 aa		2.56	□□□□□ -2
ALS2CR12-208	ENST00000448967	KLHDC8B	Q8IXV7	354 aa		2.56	□□□□□ -2
ALS2CR12-208	ENST00000448967	RPAP2	Q8IXW5	612 aa	Predicted RBP	2.56	□□□□□ -2
ALS2CR12-208	ENST00000448967	ST8SIA4	Q92187	359 aa		2.56	□□□□□ -2
ALS2CR12-208	ENST00000448967	ZUFSP	Q96AP4	578 aa		2.56	□□□□□ -2
ALS2CR12-208	ENST00000448967	RNF125	Q96EQ8	232 aa		2.56	□□□□□ -2
ALS2CR12-208	ENST00000448967	CNDP2	Q96KP4	475 aa	Known RBP	2.56	□□□□□ -2
ALS2CR12-208	ENST00000448967	MTERF1	Q99551	399 aa	Known RBP	2.56	□□□□□ -2
ALS2CR12-208	ENST00000448967	PI4K2A	Q9BTU6	479 aa		2.56	□□□□□ -2
ALS2CR12-208	ENST00000448967	BRF2	Q9HAW0	419 aa		2.56	□□□□□ -2
ALS2CR12-208	ENST00000448967	VEZT	Q9HBM0	779 aa		2.56	□□□□□ -2
ALS2CR12-208	ENST00000448967	TRMT1	Q9NXH9	659 aa	Known RBP	2.56	□□□□□ -2
ALS2CR12-208	ENST00000448967	TBK1	Q9UHD2	729 aa		2.56	□□□□□ -2
ALS2CR12-208	ENST00000448967	SARDH	Q9UL12	918 aa		2.56	□□□□□ -2
ALS2CR12-208	ENST00000448967	ARHGAP26	Q9UNA1	814 aa		2.56	□□□□□ -2
ALS2CR12-208	ENST00000448967	GAB2	Q9UQC2	676 aa		2.56	□□□□□ -2
ALS2CR12-208	ENST00000448967	KNSTRN	Q9Y448	316 aa		2.56	□□□□□ -2
ALS2CR12-208	ENST00000448967	SNX8	Q9Y5X2	465 aa		2.56	□□□□□ -2
ALS2CR12-208	ENST00000448967	CEPT1	Q9Y6K0	416 aa		2.56	□□□□□ -2
ALS2CR12-208	ENST00000448967	PASK	Q96RG2	1323 aa		2.56	□□□□□ -2
ALS2CR12-208	ENST00000448967	MED1	Q15648	1581 aa	Predicted RBP	2.56	□□□□□ -2
ALS2CR12-208	ENST00000448967	LRRC53	A6NM62	1247 aa		2.55	□□□□□ -2
ALS2CR12-208	ENST00000448967	VGLL3	A8MV65	326 aa		2.55	□□□□□ -2
ALS2CR12-208	ENST00000448967	MPHOSPH10	O00566	681 aa	Known RBP	2.55	□□□□□ -2
ALS2CR12-208	ENST00000448967	SLC7A4	O43246	635 aa		2.55	□□□□□ -2
ALS2CR12-208	ENST00000448967	TBCA	O75347	108 aa	Known RBP	2.55	□□□□□ -2
ALS2CR12-208	ENST00000448967	B3GALNT1	O75752	331 aa		2.55	□□□□□ -2
ALS2CR12-208	ENST00000448967	TGDS	O95455	350 aa		2.55	□□□□□ -2
ALS2CR12-208	ENST00000448967	MLYCD	O95822	493 aa		2.55	□□□□□ -2
ALS2CR12-208	ENST00000448967	CLTB	P09497	229 aa		2.55	□□□□□ -2
ALS2CR12-208	ENST00000448967	ACADM	P11310	421 aa		2.55	□□□□□ -2
ALS2CR12-208	ENST00000448967	SCG2	P13521	617 aa		2.55	□□□□□ -2
ALS2CR12-208	ENST00000448967	POR	P16435	677 aa	Predicted RBP	2.55	□□□□□ -2
ALS2CR12-208	ENST00000448967	CDA	P32320	146 aa		2.55	□□□□□ -2
ALS2CR12-208	ENST00000448967	ABCD1	P33897	745 aa		2.55	□□□□□ -2
ALS2CR12-208	ENST00000448967	CPOX	P36551	454 aa		2.55	□□□□□ -2
ALS2CR12-208	ENST00000448967	GNL1	P36915	607 aa	Predicted RBP	2.55	□□□□□ -2
ALS2CR12-208	ENST00000448967	CDKN1A	P38936	164 aa		2.55	□□□□□ -2
ALS2CR12-208	ENST00000448967	HNF4A	P41235	474 aa		2.55	□□□□□ -2
ALS2CR12-208	ENST00000448967	CD86	P42081	329 aa		2.55	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms