RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 VIPR2P41587 438 aa10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 NSG1P42857 185 aa10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 KCNJ2P63252 427 aa10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 ELF3P78545 371 aaPredicted RBP10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 CHRNA6Q15825 494 aa10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 TTLL9Q3SXZ7 439 aa10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 SH2D4BQ5SQS7 431 aa10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 TMEM215Q68D42 235 aa10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 ATG14Q6ZNE5 492 aa10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 MAVSQ7Z434 540 aa10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 TTC7BQ86TV6 843 aa10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 BPHLQ86WA6 291 aaPredicted RBP10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 ETFBKMTQ8IXQ9 262 aa10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 RAVER1Q8IY67 606 aaKnown RBP10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 NXPE1Q8N323 547 aa10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 MARVELD3Q96A59 401 aa10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 CMTM5Q96DZ9 223 aa10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 LINGO1Q96FE5 620 aa10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 PANX3Q96QZ0 392 aa10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 ZFP14Q9HCL3 533 aa10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 KLC4Q9NSK0 619 aa10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 ELOVL2Q9NXB9 296 aa10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 GTSE1Q9NYZ3 720 aa10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 KLHL42Q9P2K6 505 aa10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 ZDHHC2Q9UIJ5 367 aa10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 WASF2Q9Y6W5 498 aa10.47□□□□□ -0.73
VIPAS39-203ENST00000448935 UPK3BL1B0FP48 263 aa10.46□□□□□ -0.74
VIPAS39-203ENST00000448935 SUPT3HB4E1H0 165 aa10.46□□□□□ -0.74
VIPAS39-203ENST00000448935 UPK3BL2E5RIL1 263 aa10.46□□□□□ -0.74
VIPAS39-203ENST00000448935 BTN3A1O00481 513 aa10.46□□□□□ -0.74
VIPAS39-203ENST00000448935 MGRN1O60291 552 aa10.46□□□□□ -0.74
VIPAS39-203ENST00000448935 SUPT3HO75486 399 aa10.46□□□□□ -0.74
VIPAS39-203ENST00000448935 LEFTY1O75610 366 aa10.46□□□□□ -0.74
VIPAS39-203ENST00000448935 PRNPP04156 253 aa10.46□□□□□ -0.74
VIPAS39-203ENST00000448935 NCF2P19878 526 aaPredicted RBP10.46□□□□□ -0.74
VIPAS39-203ENST00000448935 KCNA5P22460 613 aa10.46□□□□□ -0.74
VIPAS39-203ENST00000448935 DGKAP23743 735 aa10.46□□□□□ -0.74
VIPAS39-203ENST00000448935 SPINT3P49223 89 aa10.46□□□□□ -0.74
VIPAS39-203ENST00000448935 CLCN7P51798 805 aa10.46□□□□□ -0.74
VIPAS39-203ENST00000448935 DCDC1P59894 354 aa10.46□□□□□ -0.74
VIPAS39-203ENST00000448935 PTSQ03393 145 aa10.46□□□□□ -0.74
VIPAS39-203ENST00000448935 RIPK1Q13546 671 aa10.46□□□□□ -0.74
VIPAS39-203ENST00000448935 E2F5Q15329 346 aa10.46□□□□□ -0.74
VIPAS39-203ENST00000448935 OR4D1Q15615 310 aa10.46□□□□□ -0.74
VIPAS39-203ENST00000448935 ZRSR2Q15696 482 aaKnown RBP10.46□□□□□ -0.74
VIPAS39-203ENST00000448935 DNAL1Q4LDG9 190 aa10.46□□□□□ -0.74
VIPAS39-203ENST00000448935 SETMARQ53H47 684 aaPredicted RBP10.46□□□□□ -0.74
VIPAS39-203ENST00000448935 ZNF805Q5CZA5 627 aa10.46□□□□□ -0.74
VIPAS39-203ENST00000448935 PTCRAQ6ISU1 281 aaPredicted RBP10.46□□□□□ -0.74
VIPAS39-203ENST00000448935 MACC1Q6ZN28 852 aa10.46□□□□□ -0.74
VIPAS39-203ENST00000448935 GET4Q7L5D6 327 aaPredicted RBP10.46□□□□□ -0.74
VIPAS39-203ENST00000448935 ADAMTSL2Q86TH1 951 aa10.46□□□□□ -0.74
VIPAS39-203ENST00000448935 TSPAN33Q86UF1 283 aa10.46□□□□□ -0.74
VIPAS39-203ENST00000448935 CUZD1Q86UP6 607 aa10.46□□□□□ -0.74
VIPAS39-203ENST00000448935 TMPRSS6Q8IU80 811 aa10.46□□□□□ -0.74
VIPAS39-203ENST00000448935 FBXO39Q8N4B4 442 aa10.46□□□□□ -0.74
VIPAS39-203ENST00000448935 CPA6Q8N4T0 437 aa10.46□□□□□ -0.74
VIPAS39-203ENST00000448935 PTGR2Q8N8N7 351 aaPredicted RBP10.46□□□□□ -0.74
VIPAS39-203ENST00000448935 SIDT2Q8NBJ9 832 aaKnown RBP10.46□□□□□ -0.74
VIPAS39-203ENST00000448935 CHST14Q8NCH0 376 aa10.46□□□□□ -0.74
VIPAS39-203ENST00000448935 AGR3Q8TD06 166 aa10.46□□□□□ -0.74
VIPAS39-203ENST00000448935 CYB5D2Q8WUJ1 264 aa10.46□□□□□ -0.74
VIPAS39-203ENST00000448935 UCMAQ8WVF2 138 aa10.46□□□□□ -0.74
VIPAS39-203ENST00000448935 WNT2BQ93097 391 aa10.46□□□□□ -0.74
VIPAS39-203ENST00000448935 VOPP1Q96AW1 172 aa10.46□□□□□ -0.74
VIPAS39-203ENST00000448935 LRRC3BQ96PB8 259 aa10.46□□□□□ -0.74
VIPAS39-203ENST00000448935 COPS8Q99627 209 aa10.46□□□□□ -0.74
VIPAS39-203ENST00000448935 C1orf21Q9H246 121 aa10.46□□□□□ -0.74
VIPAS39-203ENST00000448935 MMADHCQ9H3L0 296 aaPredicted RBP10.46□□□□□ -0.74
VIPAS39-203ENST00000448935 GSTO2Q9H4Y5 243 aa10.46□□□□□ -0.74
VIPAS39-203ENST00000448935 NSUN3Q9H649 340 aaKnown RBP10.46□□□□□ -0.74
VIPAS39-203ENST00000448935 ZDHHC3Q9NYG2 299 aa10.46□□□□□ -0.74
VIPAS39-203ENST00000448935 ARMCX1Q9P291 453 aa10.46□□□□□ -0.74
VIPAS39-203ENST00000448935 NFKBIL1Q9UBC1 381 aaPredicted RBP10.46□□□□□ -0.74
VIPAS39-203ENST00000448935 B4GALT6Q9UBX8 382 aa10.46□□□□□ -0.74
VIPAS39-203ENST00000448935 CDH7Q9ULB5 785 aa10.46□□□□□ -0.74
VIPAS39-203ENST00000448935 NUMBLQ9Y6R0 609 aa10.46□□□□□ -0.74
VIPAS39-203ENST00000448935 KIF26AQ9ULI4 1882 aaPredicted RBP10.46□□□□□ -0.74
VIPAS39-203ENST00000448935 A0A0U1RQS6 177 aa10.45□□□□□ -0.74
VIPAS39-203ENST00000448935 TTC34A8MYJ7 566 aa10.45□□□□□ -0.74
VIPAS39-203ENST00000448935 PRR5-ARHGAP8B1AHC4 643 aa10.45□□□□□ -0.74
VIPAS39-203ENST00000448935 UBXN8O00124 270 aa10.45□□□□□ -0.74
VIPAS39-203ENST00000448935 EIF3FO00303 357 aaPredicted RBP10.45□□□□□ -0.74
VIPAS39-203ENST00000448935 GRID2O43424 1007 aa10.45□□□□□ -0.74
VIPAS39-203ENST00000448935 KLK8O60259 260 aa10.45□□□□□ -0.74
VIPAS39-203ENST00000448935 MAGEC1O60732 1142 aa10.45□□□□□ -0.74
VIPAS39-203ENST00000448935 SNX2O60749 519 aa10.45□□□□□ -0.74
VIPAS39-203ENST00000448935 S100BP04271 92 aaPredicted RBP10.45□□□□□ -0.74
VIPAS39-203ENST00000448935 ENO1P06733 434 aaKnown RBP10.45□□□□□ -0.74
VIPAS39-203ENST00000448935 KRT16P08779 473 aa10.45□□□□□ -0.74
VIPAS39-203ENST00000448935 LHCGRP22888 699 aa10.45□□□□□ -0.74
VIPAS39-203ENST00000448935 KCNC1P48547 511 aa10.45□□□□□ -0.74
VIPAS39-203ENST00000448935 ARHGAP8P85298 464 aa10.45□□□□□ -0.74
VIPAS39-203ENST00000448935 AGERQ15109 404 aa10.45□□□□□ -0.74
VIPAS39-203ENST00000448935 TSNQ15631 228 aaKnown RBP10.45□□□□□ -0.74
VIPAS39-203ENST00000448935 PFKFB4Q16877 469 aa10.45□□□□□ -0.74
VIPAS39-203ENST00000448935 SLC9B1Q4ZJI4 515 aa10.45□□□□□ -0.74
VIPAS39-203ENST00000448935 VWA5B1Q5TIE3 1220 aa10.45□□□□□ -0.74
VIPAS39-203ENST00000448935 FBXW10Q5XX13 1052 aa10.45□□□□□ -0.74
VIPAS39-203ENST00000448935 ANKS6Q68DC2 871 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms