RNA–Protein interactions for RNA: ENST00000448770.5

POLR1B-209, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 2,494 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-209ENST00000448770 FAM110CQ1W6H9 321 aa13.54□□□□□ -0.24
POLR1B-209ENST00000448770 DLEU7Q6UYE1 221 aa13.54□□□□□ -0.24
POLR1B-209ENST00000448770 MRPL10Q7Z7H8 261 aaKnown RBP13.54□□□□□ -0.24
POLR1B-209ENST00000448770 MIB1Q86YT6 1006 aa13.54□□□□□ -0.24
POLR1B-209ENST00000448770 CROCCP3Q8IVE0 287 aa13.54□□□□□ -0.24
POLR1B-209ENST00000448770 TBC1D21Q8IYX1 336 aa13.54□□□□□ -0.24
POLR1B-209ENST00000448770 ZNF420Q8TAQ5 688 aaPredicted RBP13.54□□□□□ -0.24
POLR1B-209ENST00000448770 SLC22A17Q8WUG5 538 aa13.54□□□□□ -0.24
POLR1B-209ENST00000448770 FATE1Q969F0 183 aa13.54□□□□□ -0.24
POLR1B-209ENST00000448770 PPM1MQ96MI6 270 aa13.54□□□□□ -0.24
POLR1B-209ENST00000448770 TRIB3Q96RU7 358 aa13.54□□□□□ -0.24
POLR1B-209ENST00000448770 DERL2Q9GZP9 239 aa13.54□□□□□ -0.24
POLR1B-209ENST00000448770 ZFYVE28Q9HCC9 887 aa13.54□□□□□ -0.24
POLR1B-209ENST00000448770 NIPSNAP2O75323 286 aa13.53□□□□□ -0.24
POLR1B-209ENST00000448770 SLC22A3O75751 556 aa13.53□□□□□ -0.24
POLR1B-209ENST00000448770 KCNH1O95259 989 aa13.53□□□□□ -0.24
POLR1B-209ENST00000448770 ZBTB11O95625 1053 aaPredicted RBP13.53□□□□□ -0.24
POLR1B-209ENST00000448770 HTR1AP08908 422 aa13.53□□□□□ -0.24
POLR1B-209ENST00000448770 C7P10643 843 aa13.53□□□□□ -0.24
POLR1B-209ENST00000448770 HMOX2P30519 316 aa13.53□□□□□ -0.24
POLR1B-209ENST00000448770 CPT1AP50416 773 aa13.53□□□□□ -0.24
POLR1B-209ENST00000448770 EMX2Q04743 252 aa13.53□□□□□ -0.24
POLR1B-209ENST00000448770 SERINC3Q13530 473 aa13.53□□□□□ -0.24
POLR1B-209ENST00000448770 C6orf136Q5SQH8 315 aa13.53□□□□□ -0.24
POLR1B-209ENST00000448770 ANKS6Q68DC2 871 aa13.53□□□□□ -0.24
POLR1B-209ENST00000448770 MRNIPQ6NTE8 343 aa13.53□□□□□ -0.24
POLR1B-209ENST00000448770 PIANPQ8IYJ0 282 aa13.53□□□□□ -0.24
POLR1B-209ENST00000448770 GFM2Q969S9 779 aaKnown RBP13.53□□□□□ -0.24
POLR1B-209ENST00000448770 PLEKHA8Q96JA3 519 aa13.53□□□□□ -0.24
POLR1B-209ENST00000448770 MTG1Q9BT17 334 aaPredicted RBP13.53□□□□□ -0.24
POLR1B-209ENST00000448770 TRIM62Q9BVG3 475 aa13.53□□□□□ -0.24
POLR1B-209ENST00000448770 POPDC3Q9HBV1 291 aa13.53□□□□□ -0.24
POLR1B-209ENST00000448770 ZNF711Q9Y462 761 aa13.53□□□□□ -0.24
POLR1B-209ENST00000448770 PLXNA3P51805 1871 aa13.53□□□□□ -0.24
POLR1B-209ENST00000448770 A0A0D9SEW6 157 aa13.53□□□□□ -0.24
POLR1B-209ENST00000448770 BTN3A1O00481 513 aa13.53□□□□□ -0.24
POLR1B-209ENST00000448770 TNPO2O14787 897 aaKnown RBP13.53□□□□□ -0.24
POLR1B-209ENST00000448770 SNAP91O60641 907 aa13.53□□□□□ -0.24
POLR1B-209ENST00000448770 FCGR1AP12314 374 aa13.53□□□□□ -0.24
POLR1B-209ENST00000448770 ZNF140P52738 457 aaPredicted RBP13.53□□□□□ -0.24
POLR1B-209ENST00000448770 DGKQP52824 942 aa13.53□□□□□ -0.24
POLR1B-209ENST00000448770 EEFSECP57772 596 aaKnown RBP13.53□□□□□ -0.24
POLR1B-209ENST00000448770 MGAT3Q09327 533 aa13.53□□□□□ -0.24
POLR1B-209ENST00000448770 CCNYL2Q5T2Q4 361 aa13.53□□□□□ -0.24
POLR1B-209ENST00000448770 NADSYN1Q6IA69 706 aa13.53□□□□□ -0.24
POLR1B-209ENST00000448770 LETMD1Q6P1Q0 360 aa13.53□□□□□ -0.24
POLR1B-209ENST00000448770 SFRP1Q8N474 314 aa13.53□□□□□ -0.24
POLR1B-209ENST00000448770 CDYL2Q8N8U2 506 aa13.53□□□□□ -0.24
POLR1B-209ENST00000448770 SIDT2Q8NBJ9 832 aaKnown RBP13.53□□□□□ -0.24
POLR1B-209ENST00000448770 MDGA1Q8NFP4 955 aa13.53□□□□□ -0.24
POLR1B-209ENST00000448770 GABPB2Q8TAK5 448 aaPredicted RBP13.53□□□□□ -0.24
POLR1B-209ENST00000448770 STAG3L4Q8TBR4 150 aa13.53□□□□□ -0.24
POLR1B-209ENST00000448770 TMBIM1Q969X1 311 aa13.53□□□□□ -0.24
POLR1B-209ENST00000448770 CCDC97Q96F63 343 aaPredicted RBP13.53□□□□□ -0.24
POLR1B-209ENST00000448770 EXOC2Q96KP1 924 aa13.53□□□□□ -0.24
POLR1B-209ENST00000448770 LHPPQ9H008 270 aa13.53□□□□□ -0.24
POLR1B-209ENST00000448770 SLC45A1Q9Y2W3 748 aa13.53□□□□□ -0.24
POLR1B-209ENST00000448770 LCHNA4D1U4 455 aa13.52□□□□□ -0.24
POLR1B-209ENST00000448770 CRCPO75575 148 aa13.52□□□□□ -0.24
POLR1B-209ENST00000448770 ESRRBO95718 433 aa13.52□□□□□ -0.24
POLR1B-209ENST00000448770 OGNP20774 298 aaKnown RBP13.52□□□□□ -0.24
POLR1B-209ENST00000448770 HTR1EP28566 365 aa13.52□□□□□ -0.24
POLR1B-209ENST00000448770 PIGAP37287 484 aa13.52□□□□□ -0.24
POLR1B-209ENST00000448770 MRPL19P49406 292 aaKnown RBP13.52□□□□□ -0.24
POLR1B-209ENST00000448770 ARSFP54793 590 aa13.52□□□□□ -0.24
POLR1B-209ENST00000448770 ERVPABLB-1P60509 514 aa13.52□□□□□ -0.24
POLR1B-209ENST00000448770 TSPY1Q01534 308 aa13.52□□□□□ -0.24
POLR1B-209ENST00000448770 TRAF2Q12933 501 aa13.52□□□□□ -0.24
POLR1B-209ENST00000448770 PPP1R8Q12972 351 aaKnown RBP13.52□□□□□ -0.24
POLR1B-209ENST00000448770 GLYATQ6IB77 296 aa13.52□□□□□ -0.24
POLR1B-209ENST00000448770 LAIR2Q6ISS4 152 aa13.52□□□□□ -0.24
POLR1B-209ENST00000448770 PSAPL1Q6NUJ1 521 aa13.52□□□□□ -0.24
POLR1B-209ENST00000448770 TAF2Q6P1X5 1199 aa13.52□□□□□ -0.24
POLR1B-209ENST00000448770 CXCL17Q6UXB2 119 aa13.52□□□□□ -0.24
POLR1B-209ENST00000448770 DCDC5Q6ZRR9 648 aa13.52□□□□□ -0.24
POLR1B-209ENST00000448770 SPATA19Q7Z5L4 167 aa13.52□□□□□ -0.24
POLR1B-209ENST00000448770 ZFAND4Q86XD8 727 aa13.52□□□□□ -0.24
POLR1B-209ENST00000448770 SLC15A4Q8N697 577 aa13.52□□□□□ -0.24
POLR1B-209ENST00000448770 KLHL23Q8NBE8 558 aa13.52□□□□□ -0.24
POLR1B-209ENST00000448770 BPIFB6Q8NFQ5 453 aa13.52□□□□□ -0.24
POLR1B-209ENST00000448770 BRSK1Q8TDC3 778 aa13.52□□□□□ -0.24
POLR1B-209ENST00000448770 SUSD3Q96L08 255 aa13.52□□□□□ -0.24
POLR1B-209ENST00000448770 ARMC7Q9H6L4 198 aa13.52□□□□□ -0.24
POLR1B-209ENST00000448770 PDFQ9HBH1 243 aa13.52□□□□□ -0.24
POLR1B-209ENST00000448770 TBCCD1Q9NVR7 557 aa13.52□□□□□ -0.24
POLR1B-209ENST00000448770 TSR3Q9UJK0 312 aaKnown RBP13.52□□□□□ -0.24
POLR1B-209ENST00000448770 LEF1Q9UJU2 399 aaPredicted RBP13.52□□□□□ -0.24
POLR1B-209ENST00000448770 PADI3Q9ULW8 664 aa13.52□□□□□ -0.24
POLR1B-209ENST00000448770 E2F3O00716 465 aa13.52□□□□□ -0.25
POLR1B-209ENST00000448770 KLK8O60259 260 aa13.52□□□□□ -0.25
POLR1B-209ENST00000448770 SYNCRIPO60506 623 aaKnown RBP13.52□□□□□ -0.25
POLR1B-209ENST00000448770 RAMP2O60895 175 aa13.52□□□□□ -0.25
POLR1B-209ENST00000448770 ALPLP05186 524 aa13.52□□□□□ -0.25
POLR1B-209ENST00000448770 FGF1P05230 155 aa13.52□□□□□ -0.25
POLR1B-209ENST00000448770 NR4A1P22736 598 aa13.52□□□□□ -0.25
POLR1B-209ENST00000448770 GNA12Q03113 381 aa13.52□□□□□ -0.25
POLR1B-209ENST00000448770 IL10RBQ08334 325 aa13.52□□□□□ -0.25
POLR1B-209ENST00000448770 GRSF1Q12849 480 aaKnown RBP eCLIP13.52□□□□□ -0.25
POLR1B-209ENST00000448770 MAP2K5Q13163 448 aa13.52□□□□□ -0.25
POLR1B-209ENST00000448770 LAPTM5Q13571 262 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms