RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 ARSDP51689 593 aa14.62□□□□□ -0.07
HDAC4-204ENST00000446876 OR1D5P58170 312 aa14.62□□□□□ -0.07
HDAC4-204ENST00000446876 GNG11P61952 73 aa14.62□□□□□ -0.07
HDAC4-204ENST00000446876 PDE1BQ01064 536 aa14.62□□□□□ -0.07
HDAC4-204ENST00000446876 NFATC2Q13469 925 aa14.62□□□□□ -0.07
HDAC4-204ENST00000446876 SPIDRQ14159 915 aa14.62□□□□□ -0.07
HDAC4-204ENST00000446876 SEPT7Q16181 437 aaKnown RBP14.62□□□□□ -0.07
HDAC4-204ENST00000446876 ST3GAL2Q16842 350 aa14.62□□□□□ -0.07
HDAC4-204ENST00000446876 RBM44Q6ZP01 1051 aaKnown RBP14.62□□□□□ -0.07
HDAC4-204ENST00000446876 C11orf96Q7Z7L8 435 aa14.62□□□□□ -0.07
HDAC4-204ENST00000446876 BEND7Q8N7W2 519 aaPredicted RBP14.62□□□□□ -0.07
HDAC4-204ENST00000446876 OR6C4Q8NGE1 309 aa14.62□□□□□ -0.07
HDAC4-204ENST00000446876 TTC25Q96NG3 672 aa14.62□□□□□ -0.07
HDAC4-204ENST00000446876 LRRN3Q9H3W5 708 aa14.62□□□□□ -0.07
HDAC4-204ENST00000446876 CASS4Q9NQ75 786 aa14.62□□□□□ -0.07
HDAC4-204ENST00000446876 HOMER3Q9NSC5 361 aa14.62□□□□□ -0.07
HDAC4-204ENST00000446876 NLE1Q9NVX2 485 aaPredicted RBP14.62□□□□□ -0.07
HDAC4-204ENST00000446876 APPL1Q9UKG1 709 aa14.62□□□□□ -0.07
HDAC4-204ENST00000446876 WDFY3Q8IZQ1 3526 aa14.61□□□□□ -0.07
HDAC4-204ENST00000446876 TCRBV7S3A2A0A539 114 aa14.61□□□□□ -0.07
HDAC4-204ENST00000446876 MROH6A6NGR9 719 aa14.61□□□□□ -0.07
HDAC4-204ENST00000446876 OR51F1A6NGY5 319 aa14.61□□□□□ -0.07
HDAC4-204ENST00000446876 D6RAR5 112 aa14.61□□□□□ -0.07
HDAC4-204ENST00000446876 CAPNS1P04632 268 aa14.61□□□□□ -0.07
HDAC4-204ENST00000446876 MSH3P20585 1137 aa14.61□□□□□ -0.07
HDAC4-204ENST00000446876 ITGALP20701 1170 aa14.61□□□□□ -0.07
HDAC4-204ENST00000446876 ALDH4A1P30038 563 aa14.61□□□□□ -0.07
HDAC4-204ENST00000446876 COILP38432 576 aaPredicted RBP14.61□□□□□ -0.07
HDAC4-204ENST00000446876 HADHAP40939 763 aa14.61□□□□□ -0.07
HDAC4-204ENST00000446876 B4GALNT1Q00973 533 aa14.61□□□□□ -0.07
HDAC4-204ENST00000446876 CYP4F3Q08477 520 aa14.61□□□□□ -0.07
HDAC4-204ENST00000446876 BIRC2Q13490 618 aa14.61□□□□□ -0.07
HDAC4-204ENST00000446876 ISXQ2M1V0 245 aa14.61□□□□□ -0.07
HDAC4-204ENST00000446876 AMZ1Q400G9 498 aa14.61□□□□□ -0.07
HDAC4-204ENST00000446876 ZRANB3Q5FWF4 1079 aa14.61□□□□□ -0.07
HDAC4-204ENST00000446876 TMEM220Q6QAJ8 160 aa14.61□□□□□ -0.07
HDAC4-204ENST00000446876 B3GNT8Q7Z7M8 397 aa14.61□□□□□ -0.07
HDAC4-204ENST00000446876 CACTIN-AS1Q8N1I8 211 aa14.61□□□□□ -0.07
HDAC4-204ENST00000446876 SFRP1Q8N474 314 aa14.61□□□□□ -0.07
HDAC4-204ENST00000446876 ACTRT1Q8TDG2 376 aa14.61□□□□□ -0.07
HDAC4-204ENST00000446876 STYXQ8WUJ0 223 aa14.61□□□□□ -0.07
HDAC4-204ENST00000446876 ATXN7L3BQ96GX2 97 aa14.61□□□□□ -0.07
HDAC4-204ENST00000446876 GFM1Q96RP9 751 aaKnown RBP14.61□□□□□ -0.07
HDAC4-204ENST00000446876 TIMM29Q9BSF4 260 aa14.61□□□□□ -0.07
HDAC4-204ENST00000446876 FOXP3Q9BZS1 431 aa14.61□□□□□ -0.07
HDAC4-204ENST00000446876 ZCCHC2Q9C0B9 1178 aaKnown RBP14.61□□□□□ -0.07
HDAC4-204ENST00000446876 SCHIP1Q9P0W5 487 aaPredicted RBP14.61□□□□□ -0.07
HDAC4-204ENST00000446876 SLC2A6Q9UGQ3 507 aa14.61□□□□□ -0.07
HDAC4-204ENST00000446876 ENTPD2Q9Y5L3 495 aa14.61□□□□□ -0.07
HDAC4-204ENST00000446876 SLC30A1Q9Y6M5 507 aa14.61□□□□□ -0.07
HDAC4-204ENST00000446876 PMS2P1A4D2B8 440 aa14.6□□□□□ -0.07
HDAC4-204ENST00000446876 PRR19A6NJB7 356 aa14.6□□□□□ -0.07
HDAC4-204ENST00000446876 AGRPO00253 132 aa14.6□□□□□ -0.07
HDAC4-204ENST00000446876 FANCGO15287 622 aa14.6□□□□□ -0.07
HDAC4-204ENST00000446876 B4GAT1O43505 415 aa14.6□□□□□ -0.07
HDAC4-204ENST00000446876 KRT14P02533 472 aa14.6□□□□□ -0.07
HDAC4-204ENST00000446876 F3P13726 295 aa14.6□□□□□ -0.07
HDAC4-204ENST00000446876 PNLIPP16233 465 aa14.6□□□□□ -0.07
HDAC4-204ENST00000446876 RPL10P27635 214 aaKnown RBP14.6□□□□□ -0.07
HDAC4-204ENST00000446876 DRG2P55039 364 aaKnown RBP14.6□□□□□ -0.07
HDAC4-204ENST00000446876 SESN2P58004 480 aaPredicted RBP14.6□□□□□ -0.07
HDAC4-204ENST00000446876 CRADDP78560 199 aa14.6□□□□□ -0.07
HDAC4-204ENST00000446876 GPS1Q13098 491 aa14.6□□□□□ -0.07
HDAC4-204ENST00000446876 CYP1B1Q16678 543 aa14.6□□□□□ -0.07
HDAC4-204ENST00000446876 FNBP1LQ5T0N5 605 aa14.6□□□□□ -0.07
HDAC4-204ENST00000446876 IYDQ6PHW0 289 aa14.6□□□□□ -0.07
HDAC4-204ENST00000446876 CCDC137Q6PK04 289 aaKnown RBP14.6□□□□□ -0.07
HDAC4-204ENST00000446876 FAM83HQ6ZRV2 1179 aaPredicted RBP14.6□□□□□ -0.07
HDAC4-204ENST00000446876 ZNF534Q76KX8 674 aa14.6□□□□□ -0.07
HDAC4-204ENST00000446876 TMPRSS9Q7Z410 1059 aa14.6□□□□□ -0.07
HDAC4-204ENST00000446876 ZNF438Q7Z4V0 828 aa14.6□□□□□ -0.07
HDAC4-204ENST00000446876 SNX20Q7Z614 316 aa14.6□□□□□ -0.07
HDAC4-204ENST00000446876 NXPE1Q8N323 547 aa14.6□□□□□ -0.07
HDAC4-204ENST00000446876 NXPE2Q96DL1 559 aa14.6□□□□□ -0.07
HDAC4-204ENST00000446876 SGF29Q96ES7 293 aa14.6□□□□□ -0.07
HDAC4-204ENST00000446876 CDKN2AIPNLQ96HQ2 116 aa14.6□□□□□ -0.07
HDAC4-204ENST00000446876 CAPZA3Q96KX2 299 aa14.6□□□□□ -0.07
HDAC4-204ENST00000446876 ZNF778Q96MU6 729 aa14.6□□□□□ -0.07
HDAC4-204ENST00000446876 NAP1L3Q99457 506 aaPredicted RBP14.6□□□□□ -0.07
HDAC4-204ENST00000446876 CCDC86Q9H6F5 360 aaKnown RBP14.6□□□□□ -0.07
HDAC4-204ENST00000446876 EIF2B3Q9NR50 452 aaKnown RBP14.6□□□□□ -0.07
HDAC4-204ENST00000446876 FAM8A1Q9UBU6 413 aa14.6□□□□□ -0.07
HDAC4-204ENST00000446876 ZMIZ1Q9ULJ6 1067 aa14.6□□□□□ -0.07
HDAC4-204ENST00000446876 PIKFYVEQ9Y2I7 2098 aa14.6□□□□□ -0.07
HDAC4-204ENST00000446876 A0A1W2PNU3 283 aaPredicted RBP14.59□□□□□ -0.07
HDAC4-204ENST00000446876 CCDC162PA2VCL2 907 aa14.59□□□□□ -0.07
HDAC4-204ENST00000446876 AGAP14A8MT82 685 aa14.59□□□□□ -0.07
HDAC4-204ENST00000446876 PDZK1P1A8MUH7 402 aa14.59□□□□□ -0.07
HDAC4-204ENST00000446876 H7C0S8 307 aa14.59□□□□□ -0.07
HDAC4-204ENST00000446876 TAF4O00268 1085 aa14.59□□□□□ -0.07
HDAC4-204ENST00000446876 SGTAO43765 313 aa14.59□□□□□ -0.07
HDAC4-204ENST00000446876 PHF2O75151 1096 aa14.59□□□□□ -0.07
HDAC4-204ENST00000446876 TCEA3O75764 348 aa14.59□□□□□ -0.07
HDAC4-204ENST00000446876 POP7O75817 140 aaKnown RBP14.59□□□□□ -0.07
HDAC4-204ENST00000446876 GAS8O95995 478 aa14.59□□□□□ -0.07
HDAC4-204ENST00000446876 MPOP05164 745 aa14.59□□□□□ -0.07
HDAC4-204ENST00000446876 CLCNKAP51800 687 aa14.59□□□□□ -0.07
HDAC4-204ENST00000446876 HHEXQ03014 270 aa14.59□□□□□ -0.07
HDAC4-204ENST00000446876 NR1D2Q14995 579 aa14.59□□□□□ -0.07
HDAC4-204ENST00000446876 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms