RNA–Protein interactions for RNA: ENST00000444814.2

LTBR-204, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 1,553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-204ENST00000444814 DNAJC1Q96KC8 554 aaKnown RBP12.09□□□□□ -0.47
LTBR-204ENST00000444814 DEPDC7Q96QD5 511 aa12.09□□□□□ -0.47
LTBR-204ENST00000444814 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.09□□□□□ -0.47
LTBR-204ENST00000444814 OSGEPL1Q9H4B0 414 aa12.09□□□□□ -0.47
LTBR-204ENST00000444814 MRM3Q9HC36 420 aaKnown RBP12.09□□□□□ -0.47
LTBR-204ENST00000444814 ZDHHC3Q9NYG2 299 aa12.09□□□□□ -0.47
LTBR-204ENST00000444814 COMMD10Q9Y6G5 202 aa12.09□□□□□ -0.47
LTBR-204ENST00000444814 OAS3Q9Y6K5 1087 aaKnown RBP12.09□□□□□ -0.47
LTBR-204ENST00000444814 ASCC3Q8N3C0 2202 aaKnown RBP12.09□□□□□ -0.47
LTBR-204ENST00000444814 TP53BP1Q12888 1972 aaPredicted RBP12.09□□□□□ -0.47
LTBR-204ENST00000444814 AP2A2O94973 939 aa12.09□□□□□ -0.47
LTBR-204ENST00000444814 GPR3P46089 330 aa12.09□□□□□ -0.47
LTBR-204ENST00000444814 OLIG2Q13516 323 aa12.09□□□□□ -0.47
LTBR-204ENST00000444814 PTK6Q13882 451 aa12.09□□□□□ -0.47
LTBR-204ENST00000444814 ITIH4Q14624 930 aa12.09□□□□□ -0.47
LTBR-204ENST00000444814 TCEA2Q15560 299 aa12.09□□□□□ -0.47
LTBR-204ENST00000444814 DNAJC21Q5F1R6 531 aaKnown RBP12.09□□□□□ -0.47
LTBR-204ENST00000444814 TTC27Q6P3X3 843 aa12.09□□□□□ -0.47
LTBR-204ENST00000444814 CASC4Q6P4E1 433 aa12.09□□□□□ -0.47
LTBR-204ENST00000444814 CRTC3Q6UUV7 619 aa12.09□□□□□ -0.47
LTBR-204ENST00000444814 DHRS13Q6UX07 377 aa12.09□□□□□ -0.47
LTBR-204ENST00000444814 SYT10Q6XYQ8 523 aa12.09□□□□□ -0.47
LTBR-204ENST00000444814 TMPRSS7Q7RTY8 843 aa12.09□□□□□ -0.47
LTBR-204ENST00000444814 SLCO6A1Q86UG4 719 aa12.09□□□□□ -0.47
LTBR-204ENST00000444814 HOOK3Q86VS8 718 aa12.09□□□□□ -0.47
LTBR-204ENST00000444814 TRIM48Q8IWZ4 208 aa12.09□□□□□ -0.47
LTBR-204ENST00000444814 RBM12BQ8IXT5 1001 aaKnown RBP12.09□□□□□ -0.47
LTBR-204ENST00000444814 MPP5Q8N3R9 675 aa12.09□□□□□ -0.47
LTBR-204ENST00000444814 KYQ8NBH2 561 aa12.09□□□□□ -0.47
LTBR-204ENST00000444814 GPR156Q8NFN8 814 aa12.09□□□□□ -0.47
LTBR-204ENST00000444814 OR6P1Q8NGX9 317 aa12.09□□□□□ -0.47
LTBR-204ENST00000444814 DPYSL5Q9BPU6 564 aa12.09□□□□□ -0.47
LTBR-204ENST00000444814 PNMA8BQ9ULN7 279 aaPredicted RBP12.09□□□□□ -0.47
LTBR-204ENST00000444814 VPS9D1Q9Y2B5 631 aa12.09□□□□□ -0.47
LTBR-204ENST00000444814 LRRK1Q38SD2 2015 aa12.09□□□□□ -0.47
LTBR-204ENST00000444814 DOCK9Q9BZ29 2069 aa12.08□□□□□ -0.48
LTBR-204ENST00000444814 CEP250Q9BV73 2442 aa12.08□□□□□ -0.48
LTBR-204ENST00000444814 MED19A0JLT2 244 aaPredicted RBP12.08□□□□□ -0.48
LTBR-204ENST00000444814 SDR42E2A6NKP2 422 aa12.08□□□□□ -0.48
LTBR-204ENST00000444814 PDZK1P1A8MUH7 402 aa12.08□□□□□ -0.48
LTBR-204ENST00000444814 OPA1O60313 960 aa12.08□□□□□ -0.48
LTBR-204ENST00000444814 UGT1A9O60656 530 aa12.08□□□□□ -0.48
LTBR-204ENST00000444814 CELA2BP08218 269 aaPredicted RBP12.08□□□□□ -0.48
LTBR-204ENST00000444814 UGT1A6P19224 532 aa12.08□□□□□ -0.48
LTBR-204ENST00000444814 UGT1A1P22309 533 aa12.08□□□□□ -0.48
LTBR-204ENST00000444814 UGT1A4P22310 534 aa12.08□□□□□ -0.48
LTBR-204ENST00000444814 PSMA3P25788 255 aa12.08□□□□□ -0.48
LTBR-204ENST00000444814 ACRV1P26436 265 aa12.08□□□□□ -0.48
LTBR-204ENST00000444814 UGT1A3P35503 534 aa12.08□□□□□ -0.48
LTBR-204ENST00000444814 UGT1A5P35504 534 aa12.08□□□□□ -0.48
LTBR-204ENST00000444814 NSG1P42857 185 aa12.08□□□□□ -0.48
LTBR-204ENST00000444814 PPM1FP49593 454 aaPredicted RBP12.08□□□□□ -0.48
LTBR-204ENST00000444814 MSLNQ13421 630 aaPredicted RBP12.08□□□□□ -0.48
LTBR-204ENST00000444814 SPIDRQ14159 915 aa12.08□□□□□ -0.48
LTBR-204ENST00000444814 KCNJ11Q14654 390 aa12.08□□□□□ -0.48
LTBR-204ENST00000444814 SMAD1Q15797 465 aaKnown RBP12.08□□□□□ -0.48
LTBR-204ENST00000444814 BCL7AQ4VC05 210 aa12.08□□□□□ -0.48
LTBR-204ENST00000444814 CERCAMQ5T4B2 595 aa12.08□□□□□ -0.48
LTBR-204ENST00000444814 TMEM220Q6QAJ8 160 aa12.08□□□□□ -0.48
LTBR-204ENST00000444814 SDCCAG8Q86SQ7 713 aaPredicted RBP12.08□□□□□ -0.48
LTBR-204ENST00000444814 KLHL7Q8IXQ5 586 aa12.08□□□□□ -0.48
LTBR-204ENST00000444814 CHCHD4Q8N4Q1 142 aa12.08□□□□□ -0.48
LTBR-204ENST00000444814 GLIS1Q8NBF1 620 aa12.08□□□□□ -0.48
LTBR-204ENST00000444814 POM121Q96HA1 1249 aa12.08□□□□□ -0.48
LTBR-204ENST00000444814 NAT9Q9BTE0 207 aa12.08□□□□□ -0.48
LTBR-204ENST00000444814 DDX47Q9H0S4 455 aaKnown RBP12.08□□□□□ -0.48
LTBR-204ENST00000444814 EPB41L1Q9H4G0 881 aa12.08□□□□□ -0.48
LTBR-204ENST00000444814 UGT1A7Q9HAW7 530 aa12.08□□□□□ -0.48
LTBR-204ENST00000444814 UGT1A10Q9HAW8 530 aa12.08□□□□□ -0.48
LTBR-204ENST00000444814 UGT1A8Q9HAW9 530 aa12.08□□□□□ -0.48
LTBR-204ENST00000444814 KLC4Q9NSK0 619 aa12.08□□□□□ -0.48
LTBR-204ENST00000444814 TOR4AQ9NXH8 423 aa12.08□□□□□ -0.48
LTBR-204ENST00000444814 AKAP7Q9P0M2 348 aaPredicted RBP12.08□□□□□ -0.48
LTBR-204ENST00000444814 LRIT1Q9P2V4 623 aa12.08□□□□□ -0.48
LTBR-204ENST00000444814 CLCA2Q9UQC9 943 aa12.08□□□□□ -0.48
LTBR-204ENST00000444814 VPS13AQ96RL7 3174 aa12.07□□□□□ -0.48
LTBR-204ENST00000444814 AGAP14A8MT82 685 aa12.07□□□□□ -0.48
LTBR-204ENST00000444814 HYAL3O43820 417 aaPredicted RBP12.07□□□□□ -0.48
LTBR-204ENST00000444814 SNX2O60749 519 aa12.07□□□□□ -0.48
LTBR-204ENST00000444814 MTX2O75431 263 aa12.07□□□□□ -0.48
LTBR-204ENST00000444814 FTH1P02794 183 aa12.07□□□□□ -0.48
LTBR-204ENST00000444814 F3P13726 295 aa12.07□□□□□ -0.48
LTBR-204ENST00000444814 ATP1B2P14415 290 aaPredicted RBP12.07□□□□□ -0.48
LTBR-204ENST00000444814 AK4P27144 223 aaPredicted RBP12.07□□□□□ -0.48
LTBR-204ENST00000444814 TTPAP49638 278 aa12.07□□□□□ -0.48
LTBR-204ENST00000444814 XIAPP98170 497 aa12.07□□□□□ -0.48
LTBR-204ENST00000444814 PLOD1Q02809 727 aaPredicted RBP12.07□□□□□ -0.48
LTBR-204ENST00000444814 HLTFQ14527 1009 aaKnown RBP eCLIP12.07□□□□□ -0.48
LTBR-204ENST00000444814 RNF187Q5TA31 235 aaPredicted RBP12.07□□□□□ -0.48
LTBR-204ENST00000444814 HES3Q5TGS1 186 aa12.07□□□□□ -0.48
LTBR-204ENST00000444814 MRNIPQ6NTE8 343 aa12.07□□□□□ -0.48
LTBR-204ENST00000444814 GUSBP11Q6P575 273 aa12.07□□□□□ -0.48
LTBR-204ENST00000444814 WASH2PQ6VEQ5 465 aa12.07□□□□□ -0.48
LTBR-204ENST00000444814 RBM44Q6ZP01 1051 aaKnown RBP12.07□□□□□ -0.48
LTBR-204ENST00000444814 PRUNE1Q86TP1 453 aa12.07□□□□□ -0.48
LTBR-204ENST00000444814 CCNJLQ8IV13 435 aa12.07□□□□□ -0.48
LTBR-204ENST00000444814 PNPLA1Q8N8W4 532 aa12.07□□□□□ -0.48
LTBR-204ENST00000444814 MNS1Q8NEH6 495 aa12.07□□□□□ -0.48
LTBR-204ENST00000444814 OR4L1Q8NH43 312 aa12.07□□□□□ -0.48
LTBR-204ENST00000444814 AHCYL2Q96HN2 611 aaKnown RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms