RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 ANKRD11Q6UB99 2663 aaPredicted RBP18.36■□□□□ 0.53
CCDC188-202ENST00000444532 C4orf22Q6V702 233 aa18.36■□□□□ 0.53
CCDC188-202ENST00000444532 SLC9B2Q86UD5 537 aa18.36■□□□□ 0.53
CCDC188-202ENST00000444532 PIM3Q86V86 326 aa18.36■□□□□ 0.53
CCDC188-202ENST00000444532 TRAPPC5Q8IUR0 188 aa18.36■□□□□ 0.53
CCDC188-202ENST00000444532 CCDC89Q8N998 374 aa18.36■□□□□ 0.53
CCDC188-202ENST00000444532 FGF11Q92914 225 aa18.36■□□□□ 0.53
CCDC188-202ENST00000444532 SH3KBP1Q96B97 665 aa18.36■□□□□ 0.53
CCDC188-202ENST00000444532 ZNF578Q96N58 590 aaPredicted RBP18.36■□□□□ 0.53
CCDC188-202ENST00000444532 OSGEPL1Q9H4B0 414 aa18.36■□□□□ 0.53
CCDC188-202ENST00000444532 STN1Q9H668 368 aaKnown RBP18.36■□□□□ 0.53
CCDC188-202ENST00000444532 ASB8Q9H765 288 aa18.36■□□□□ 0.53
CCDC188-202ENST00000444532 PAK5Q9P286 719 aa18.36■□□□□ 0.53
CCDC188-202ENST00000444532 FKBPLQ9UIM3 349 aa18.36■□□□□ 0.53
CCDC188-202ENST00000444532 ATXN7L1Q9ULK2 861 aaPredicted RBP18.36■□□□□ 0.53
CCDC188-202ENST00000444532 SATB2Q9UPW6 733 aa18.36■□□□□ 0.53
CCDC188-202ENST00000444532 PCDHGA8Q9Y5G5 932 aa18.36■□□□□ 0.53
CCDC188-202ENST00000444532 DNMT3AQ9Y6K1 912 aaPredicted RBP18.36■□□□□ 0.53
CCDC188-202ENST00000444532 CACNA1BQ00975 2339 aa18.35■□□□□ 0.53
CCDC188-202ENST00000444532 PRR19A6NJB7 356 aa18.35■□□□□ 0.53
CCDC188-202ENST00000444532 AGAP14A8MT82 685 aa18.35■□□□□ 0.53
CCDC188-202ENST00000444532 GPR39O43194 453 aa18.35■□□□□ 0.53
CCDC188-202ENST00000444532 TPH1P17752 444 aa18.35■□□□□ 0.53
CCDC188-202ENST00000444532 CD1CP29017 333 aa18.35■□□□□ 0.53
CCDC188-202ENST00000444532 CXCR5P32302 372 aa18.35■□□□□ 0.53
CCDC188-202ENST00000444532 ERVPABLB-1P60509 514 aa18.35■□□□□ 0.53
CCDC188-202ENST00000444532 GPLD1P80108 840 aa18.35■□□□□ 0.53
CCDC188-202ENST00000444532 XIAPP98170 497 aa18.35■□□□□ 0.53
CCDC188-202ENST00000444532 HHEXQ03014 270 aa18.35■□□□□ 0.53
CCDC188-202ENST00000444532 NFATC2Q13469 925 aa18.35■□□□□ 0.53
CCDC188-202ENST00000444532 GSE1Q14687 1217 aa18.35■□□□□ 0.53
CCDC188-202ENST00000444532 LONRF2Q1L5Z9 754 aa18.35■□□□□ 0.53
CCDC188-202ENST00000444532 TBC1D25Q3MII6 688 aa18.35■□□□□ 0.53
CCDC188-202ENST00000444532 AMZ1Q400G9 498 aa18.35■□□□□ 0.53
CCDC188-202ENST00000444532 C11orf96Q7Z7L8 435 aa18.35■□□□□ 0.53
CCDC188-202ENST00000444532 B3GNT8Q7Z7M8 397 aa18.35■□□□□ 0.53
CCDC188-202ENST00000444532 REXO1L1PQ8IX06 675 aa18.35■□□□□ 0.53
CCDC188-202ENST00000444532 TAB3Q8N5C8 712 aaPredicted RBP18.35■□□□□ 0.53
CCDC188-202ENST00000444532 RASGEF1AQ8N9B8 481 aa18.35■□□□□ 0.53
CCDC188-202ENST00000444532 OR13C4Q8NGS5 318 aa18.35■□□□□ 0.53
CCDC188-202ENST00000444532 ZNF514Q96K75 400 aaPredicted RBP18.35■□□□□ 0.53
CCDC188-202ENST00000444532 SLC46A1Q96NT5 459 aa18.35■□□□□ 0.53
CCDC188-202ENST00000444532 FOXP3Q9BZS1 431 aa18.35■□□□□ 0.53
CCDC188-202ENST00000444532 PRDM8Q9NQV8 689 aa18.35■□□□□ 0.53
CCDC188-202ENST00000444532 KCNK4Q9NYG8 393 aa18.35■□□□□ 0.53
CCDC188-202ENST00000444532 IGHV1OR21-1A0A087WYE8 117 aa18.34■□□□□ 0.53
CCDC188-202ENST00000444532 A0A1W2PNU3 283 aaPredicted RBP18.34■□□□□ 0.53
CCDC188-202ENST00000444532 E7EVH7 732 aa18.34■□□□□ 0.53
CCDC188-202ENST00000444532 SUN1O94901 812 aa18.34■□□□□ 0.53
CCDC188-202ENST00000444532 GAS8O95995 478 aa18.34■□□□□ 0.53
CCDC188-202ENST00000444532 ETS1P14921 441 aa18.34■□□□□ 0.53
CCDC188-202ENST00000444532 MSH3P20585 1137 aa18.34■□□□□ 0.53
CCDC188-202ENST00000444532 RBMS1P29558 406 aaKnown RBP18.34■□□□□ 0.53
CCDC188-202ENST00000444532 CA5AP35218 305 aa18.34■□□□□ 0.53
CCDC188-202ENST00000444532 MLLT3P42568 568 aaPredicted RBP18.34■□□□□ 0.53
CCDC188-202ENST00000444532 LMAN1P49257 510 aa18.34■□□□□ 0.53
CCDC188-202ENST00000444532 CDH17Q12864 832 aa18.34■□□□□ 0.53
CCDC188-202ENST00000444532 SEMA5AQ13591 1074 aa18.34■□□□□ 0.53
CCDC188-202ENST00000444532 PLA2G4EQ3MJ16 856 aa18.34■□□□□ 0.53
CCDC188-202ENST00000444532 MAP9Q49MG5 647 aa18.34■□□□□ 0.53
CCDC188-202ENST00000444532 GPR33Q49SQ1 333 aa18.34■□□□□ 0.53
CCDC188-202ENST00000444532 WASH2PQ6VEQ5 465 aa18.34■□□□□ 0.53
CCDC188-202ENST00000444532 SNIP1Q8TAD8 396 aaKnown RBP18.34■□□□□ 0.53
CCDC188-202ENST00000444532 STYXQ8WUJ0 223 aa18.34■□□□□ 0.53
CCDC188-202ENST00000444532 TMEM159Q96B96 161 aa18.34■□□□□ 0.53
CCDC188-202ENST00000444532 ULK4Q96C45 1275 aa18.34■□□□□ 0.53
CCDC188-202ENST00000444532 PRR11Q96HE9 360 aaPredicted RBP18.34■□□□□ 0.53
CCDC188-202ENST00000444532 PBKQ96KB5 322 aa18.34■□□□□ 0.53
CCDC188-202ENST00000444532 SLC38A3Q99624 504 aa18.34■□□□□ 0.53
CCDC188-202ENST00000444532 DPYSL5Q9BPU6 564 aa18.34■□□□□ 0.53
CCDC188-202ENST00000444532 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.34■□□□□ 0.53
CCDC188-202ENST00000444532 EPB41L5Q9HCM4 733 aa18.34■□□□□ 0.53
CCDC188-202ENST00000444532 WASH6PQ9NQA3 447 aa18.34■□□□□ 0.53
CCDC188-202ENST00000444532 RAB6BQ9NRW1 208 aa18.34■□□□□ 0.53
CCDC188-202ENST00000444532 NLE1Q9NVX2 485 aaPredicted RBP18.34■□□□□ 0.53
CCDC188-202ENST00000444532 CPNE7Q9UBL6 633 aa18.34■□□□□ 0.53
CCDC188-202ENST00000444532 DNAJC16Q9Y2G8 782 aa18.34■□□□□ 0.53
CCDC188-202ENST00000444532 ACACAQ13085 2346 aa18.34■□□□□ 0.53
CCDC188-202ENST00000444532 APC2O95996 2303 aa18.33■□□□□ 0.53
CCDC188-202ENST00000444532 A0A087WV48 116 aa18.33■□□□□ 0.52
CCDC188-202ENST00000444532 H7C0S8 307 aa18.33■□□□□ 0.52
CCDC188-202ENST00000444532 TLX3O43711 291 aaPredicted RBP18.33■□□□□ 0.52
CCDC188-202ENST00000444532 POP7O75817 140 aaKnown RBP18.33■□□□□ 0.52
CCDC188-202ENST00000444532 KRT37O76014 449 aa18.33■□□□□ 0.52
CCDC188-202ENST00000444532 XRCC1P18887 633 aaPredicted RBP18.33■□□□□ 0.52
CCDC188-202ENST00000444532 ITGALP20701 1170 aa18.33■□□□□ 0.52
CCDC188-202ENST00000444532 IDSP22304 550 aa18.33■□□□□ 0.52
CCDC188-202ENST00000444532 MSNP26038 577 aaKnown RBP18.33■□□□□ 0.52
CCDC188-202ENST00000444532 AKT1P31749 480 aa18.33■□□□□ 0.52
CCDC188-202ENST00000444532 EIF2S3P41091 472 aaKnown RBP18.33■□□□□ 0.52
CCDC188-202ENST00000444532 TMPRSS15P98073 1019 aa18.33■□□□□ 0.52
CCDC188-202ENST00000444532 DMPKQ09013 629 aa18.33■□□□□ 0.52
CCDC188-202ENST00000444532 LAMB3Q13751 1172 aa18.33■□□□□ 0.52
CCDC188-202ENST00000444532 POU6F1Q14863 301 aa18.33■□□□□ 0.52
CCDC188-202ENST00000444532 KIF26BQ2KJY2 2108 aa18.33■□□□□ 0.52
CCDC188-202ENST00000444532 AGAP9Q5VTM2 703 aa18.33■□□□□ 0.52
CCDC188-202ENST00000444532 TMEM220Q6QAJ8 160 aa18.33■□□□□ 0.52
CCDC188-202ENST00000444532 ABRAXAS1Q6UWZ7 409 aa18.33■□□□□ 0.52
CCDC188-202ENST00000444532 USP53Q70EK8 1073 aa18.33■□□□□ 0.52
CCDC188-202ENST00000444532 RAB11FIP2Q7L804 512 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms