RNA–Protein interactions for RNA: ENST00000443785.5

PAXBP1-204, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 1 (best)

Gene PAXBP1, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-204ENST00000443785 FANCEQ9HB96 536 aa18.78■□□□□ 0.6
PAXBP1-204ENST00000443785 PRDM5Q9NQX1 630 aaPredicted RBP18.78■□□□□ 0.6
PAXBP1-204ENST00000443785 SDR39U1Q9NRG7 319 aaPredicted RBP18.78■□□□□ 0.6
PAXBP1-204ENST00000443785 WARS2Q9UGM6 360 aaKnown RBP18.78■□□□□ 0.6
PAXBP1-204ENST00000443785 ANAPC2Q9UJX6 822 aa18.78■□□□□ 0.6
PAXBP1-204ENST00000443785 INVSQ9Y283 1065 aa18.78■□□□□ 0.6
PAXBP1-204ENST00000443785 GPR45Q9Y5Y3 372 aa18.78■□□□□ 0.6
PAXBP1-204ENST00000443785 ZFP37Q9Y6Q3 630 aaPredicted RBP18.78■□□□□ 0.6
PAXBP1-204ENST00000443785 A0A0U1RQF3 1178 aa18.77■□□□□ 0.6
PAXBP1-204ENST00000443785 ALPIP09923 528 aa18.77■□□□□ 0.6
PAXBP1-204ENST00000443785 HOXC13P31276 330 aa18.77■□□□□ 0.6
PAXBP1-204ENST00000443785 SHMT2P34897 504 aa18.77■□□□□ 0.6
PAXBP1-204ENST00000443785 CCT8P50990 548 aa18.77■□□□□ 0.6
PAXBP1-204ENST00000443785 RAD51Q06609 339 aa18.77■□□□□ 0.6
PAXBP1-204ENST00000443785 VARS2Q5ST30 1063 aaKnown RBP18.77■□□□□ 0.6
PAXBP1-204ENST00000443785 AFMIDQ63HM1 303 aa18.77■□□□□ 0.6
PAXBP1-204ENST00000443785 KANK2Q63ZY3 851 aa18.77■□□□□ 0.6
PAXBP1-204ENST00000443785 ANKRD46Q86W74 232 aa18.77■□□□□ 0.6
PAXBP1-204ENST00000443785 SYT17Q9BSW7 474 aa18.77■□□□□ 0.6
PAXBP1-204ENST00000443785 NPLQ9BXD5 320 aaPredicted RBP18.77■□□□□ 0.6
PAXBP1-204ENST00000443785 GPR62Q9BZJ7 368 aa18.77■□□□□ 0.6
PAXBP1-204ENST00000443785 MRM3Q9HC36 420 aaKnown RBP18.77■□□□□ 0.6
PAXBP1-204ENST00000443785 GABRQQ9UN88 632 aa18.77■□□□□ 0.6
PAXBP1-204ENST00000443785 GJB5O95377 273 aa18.77■□□□□ 0.6
PAXBP1-204ENST00000443785 HRH2P25021 359 aa18.77■□□□□ 0.6
PAXBP1-204ENST00000443785 ERVPABLB-1P60509 514 aa18.77■□□□□ 0.6
PAXBP1-204ENST00000443785 RPL26P61254 145 aaKnown RBP18.77■□□□□ 0.6
PAXBP1-204ENST00000443785 TRPV3Q8NET8 790 aa18.77■□□□□ 0.6
PAXBP1-204ENST00000443785 MYRFLQ96LU7 910 aa18.77■□□□□ 0.6
PAXBP1-204ENST00000443785 C17orf80Q9BSJ5 609 aa18.77■□□□□ 0.6
PAXBP1-204ENST00000443785 CARS2Q9HA77 564 aaKnown RBP18.77■□□□□ 0.6
PAXBP1-204ENST00000443785 ARNT2Q9HBZ2 717 aa18.77■□□□□ 0.6
PAXBP1-204ENST00000443785 ATP13A1Q9HD20 1204 aa18.77■□□□□ 0.6
PAXBP1-204ENST00000443785 PLK2Q9NYY3 685 aa18.77■□□□□ 0.6
PAXBP1-204ENST00000443785 A0A087WXM4 84 aa18.77■□□□□ 0.59
PAXBP1-204ENST00000443785 C1QCP02747 245 aa18.77■□□□□ 0.59
PAXBP1-204ENST00000443785 ELNP15502 786 aa18.77■□□□□ 0.59
PAXBP1-204ENST00000443785 EFNA1P20827 205 aaPredicted RBP18.77■□□□□ 0.59
PAXBP1-204ENST00000443785 MATN1P21941 496 aa18.77■□□□□ 0.59
PAXBP1-204ENST00000443785 BFSP2Q13515 415 aa18.77■□□□□ 0.59
PAXBP1-204ENST00000443785 RFTN2Q52LD8 501 aaPredicted RBP18.77■□□□□ 0.59
PAXBP1-204ENST00000443785 C8orf82Q6P1X6 216 aaPredicted RBP18.77■□□□□ 0.59
PAXBP1-204ENST00000443785 ENPP6Q6UWR7 440 aa18.77■□□□□ 0.59
PAXBP1-204ENST00000443785 LYSMD3Q7Z3D4 306 aa18.77■□□□□ 0.59
PAXBP1-204ENST00000443785 TMEM126BQ8IUX1 230 aa18.77■□□□□ 0.59
PAXBP1-204ENST00000443785 ERI1Q8IV48 349 aaKnown RBP18.77■□□□□ 0.59
PAXBP1-204ENST00000443785 GIPC3Q8TF64 312 aa18.77■□□□□ 0.59
PAXBP1-204ENST00000443785 PRDM8Q9NQV8 689 aa18.77■□□□□ 0.59
PAXBP1-204ENST00000443785 PCDHA9Q9Y5H5 950 aa18.77■□□□□ 0.59
PAXBP1-204ENST00000443785 DFNA5O60443 496 aa18.76■□□□□ 0.59
PAXBP1-204ENST00000443785 XYLBO75191 536 aa18.76■□□□□ 0.59
PAXBP1-204ENST00000443785 LDLRP01130 860 aa18.76■□□□□ 0.59
PAXBP1-204ENST00000443785 CA5AP35218 305 aa18.76■□□□□ 0.59
PAXBP1-204ENST00000443785 HSPA7P48741 367 aa18.76■□□□□ 0.59
PAXBP1-204ENST00000443785 ATP6V0D1P61421 351 aa18.76■□□□□ 0.59
PAXBP1-204ENST00000443785 KCNA10Q16322 511 aa18.76■□□□□ 0.59
PAXBP1-204ENST00000443785 CYBRD1Q53TN4 286 aa18.76■□□□□ 0.59
PAXBP1-204ENST00000443785 ATXN7L2Q5T6C5 722 aaPredicted RBP18.76■□□□□ 0.59
PAXBP1-204ENST00000443785 ARMC12Q5T9G4 340 aa18.76■□□□□ 0.59
PAXBP1-204ENST00000443785 ELMSAN1Q6PJG2 1045 aa18.76■□□□□ 0.59
PAXBP1-204ENST00000443785 PRSS55Q6UWB4 352 aaPredicted RBP18.76■□□□□ 0.59
PAXBP1-204ENST00000443785 RTN4RL1Q86UN2 441 aaPredicted RBP18.76■□□□□ 0.59
PAXBP1-204ENST00000443785 FAM126BQ8IXS8 530 aa18.76■□□□□ 0.59
PAXBP1-204ENST00000443785 GABPB2Q8TAK5 448 aaPredicted RBP18.76■□□□□ 0.59
PAXBP1-204ENST00000443785 ROPN1LQ96C74 230 aa18.76■□□□□ 0.59
PAXBP1-204ENST00000443785 SLC39A13Q96H72 371 aa18.76■□□□□ 0.59
PAXBP1-204ENST00000443785 SUSD3Q96L08 255 aa18.76■□□□□ 0.59
PAXBP1-204ENST00000443785 FAM193BQ96PV7 902 aaPredicted RBP18.76■□□□□ 0.59
PAXBP1-204ENST00000443785 CINPQ9BW66 212 aaPredicted RBP18.76■□□□□ 0.59
PAXBP1-204ENST00000443785 PCDH12Q9NPG4 1184 aa18.76■□□□□ 0.59
PAXBP1-204ENST00000443785 TMEM248Q9NWD8 314 aa18.76■□□□□ 0.59
PAXBP1-204ENST00000443785 ACTR3BQ9P1U1 418 aa18.76■□□□□ 0.59
PAXBP1-204ENST00000443785 CIDEBQ9UHD4 219 aa18.76■□□□□ 0.59
PAXBP1-204ENST00000443785 LOC285095A0A1B0GVY8 99 aa18.76■□□□□ 0.59
PAXBP1-204ENST00000443785 H0Y626 953 aa18.76■□□□□ 0.59
PAXBP1-204ENST00000443785 H3BMQ9 156 aa18.76■□□□□ 0.59
PAXBP1-204ENST00000443785 ARVCFO00192 962 aa18.76■□□□□ 0.59
PAXBP1-204ENST00000443785 TRIM16O95361 564 aa18.76■□□□□ 0.59
PAXBP1-204ENST00000443785 AKR1A1P14550 325 aa18.76■□□□□ 0.59
PAXBP1-204ENST00000443785 GSSP48637 474 aa18.76■□□□□ 0.59
PAXBP1-204ENST00000443785 ZNF157P51786 506 aaPredicted RBP18.76■□□□□ 0.59
PAXBP1-204ENST00000443785 ATP6AP1LQ52LC2 224 aa18.76■□□□□ 0.59
PAXBP1-204ENST00000443785 GPSM1Q86YR5 675 aa18.76■□□□□ 0.59
PAXBP1-204ENST00000443785 ZNF683Q8IZ20 524 aa18.76■□□□□ 0.59
PAXBP1-204ENST00000443785 DTWD1Q8N5C7 304 aa18.76■□□□□ 0.59
PAXBP1-204ENST00000443785 ATP6V0D2Q8N8Y2 350 aa18.76■□□□□ 0.59
PAXBP1-204ENST00000443785 OR10A6Q8NH74 314 aa18.76■□□□□ 0.59
PAXBP1-204ENST00000443785 BRSK1Q8TDC3 778 aa18.76■□□□□ 0.59
PAXBP1-204ENST00000443785 COG8Q96MW5 612 aa18.76■□□□□ 0.59
PAXBP1-204ENST00000443785 SMPD3Q9NY59 655 aaPredicted RBP18.76■□□□□ 0.59
PAXBP1-204ENST00000443785 A0A1W2PP18 115 aa18.75■□□□□ 0.59
PAXBP1-204ENST00000443785 M0QZQ0 153 aa18.75■□□□□ 0.59
PAXBP1-204ENST00000443785 CYP4B1P13584 511 aa18.75■□□□□ 0.59
PAXBP1-204ENST00000443785 SLC2A4P14672 509 aa18.75■□□□□ 0.59
PAXBP1-204ENST00000443785 FSHRP23945 695 aa18.75■□□□□ 0.59
PAXBP1-204ENST00000443785 ACADVLP49748 655 aa18.75■□□□□ 0.59
PAXBP1-204ENST00000443785 RPL38P63173 70 aaKnown RBP18.75■□□□□ 0.59
PAXBP1-204ENST00000443785 C6orf136Q5SQH8 315 aa18.75■□□□□ 0.59
PAXBP1-204ENST00000443785 GPR180Q86V85 440 aa18.75■□□□□ 0.59
PAXBP1-204ENST00000443785 KRTCAP2Q8N6L1 136 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms