RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 CHST15Q7LFX5 561 aaPredicted RBP8.68□□□□□ -1.02
USP6NL-203ENST00000443016 GPR155Q7Z3F1 870 aa8.68□□□□□ -1.02
USP6NL-203ENST00000443016 CTAGE6Q86UF2 777 aa8.68□□□□□ -1.02
USP6NL-203ENST00000443016 CREG2Q8IUH2 290 aa8.68□□□□□ -1.02
USP6NL-203ENST00000443016 CTAGE4Q8IX94 777 aa8.68□□□□□ -1.02
USP6NL-203ENST00000443016 TFB1MQ8WVM0 346 aaKnown RBP8.68□□□□□ -1.02
USP6NL-203ENST00000443016 PATE1Q8WXA2 126 aa8.68□□□□□ -1.02
USP6NL-203ENST00000443016 OLFM3Q96PB7 478 aa8.68□□□□□ -1.02
USP6NL-203ENST00000443016 SPATA16Q9BXB7 569 aa8.68□□□□□ -1.02
USP6NL-203ENST00000443016 FRMD8P1Q9BZ68 369 aaPredicted RBP8.68□□□□□ -1.02
USP6NL-203ENST00000443016 DPH1Q9BZG8 443 aa8.68□□□□□ -1.02
USP6NL-203ENST00000443016 GPR63Q9BZJ6 419 aa8.68□□□□□ -1.02
USP6NL-203ENST00000443016 SLC25A51Q9H1U9 297 aa8.68□□□□□ -1.02
USP6NL-203ENST00000443016 L2HGDHQ9H9P8 463 aa8.68□□□□□ -1.02
USP6NL-203ENST00000443016 PRKAB1Q9Y478 270 aa8.68□□□□□ -1.02
USP6NL-203ENST00000443016 CFAP46Q8IYW2 2715 aa8.68□□□□□ -1.02
USP6NL-203ENST00000443016 TRBV23OR9-2A0A075B6M9 112 aa8.68□□□□□ -1.02
USP6NL-203ENST00000443016 PMPCBO75439 489 aa8.68□□□□□ -1.02
USP6NL-203ENST00000443016 ZNF189O75820 626 aaPredicted RBP8.68□□□□□ -1.02
USP6NL-203ENST00000443016 MT-CYBP00156 380 aaPredicted RBP8.68□□□□□ -1.02
USP6NL-203ENST00000443016 TMPRSS3P57727 454 aa8.68□□□□□ -1.02
USP6NL-203ENST00000443016 OR1D5P58170 312 aa8.68□□□□□ -1.02
USP6NL-203ENST00000443016 NAA30Q147X3 362 aaPredicted RBP8.68□□□□□ -1.02
USP6NL-203ENST00000443016 BRD3Q15059 726 aa8.68□□□□□ -1.02
USP6NL-203ENST00000443016 PYCR3Q53H96 274 aa8.68□□□□□ -1.02
USP6NL-203ENST00000443016 TEX44Q53QW1 395 aa8.68□□□□□ -1.02
USP6NL-203ENST00000443016 ALS2CLQ60I27 953 aa8.68□□□□□ -1.02
USP6NL-203ENST00000443016 IGF2-ASQ6U949 168 aa8.68□□□□□ -1.02
USP6NL-203ENST00000443016 BBS12Q6ZW61 710 aa8.68□□□□□ -1.02
USP6NL-203ENST00000443016 LYSMD3Q7Z3D4 306 aa8.68□□□□□ -1.02
USP6NL-203ENST00000443016 ZC3H18Q86VM9 953 aaKnown RBP8.68□□□□□ -1.02
USP6NL-203ENST00000443016 NAGSQ8N159 534 aa8.68□□□□□ -1.02
USP6NL-203ENST00000443016 SPATA22Q8NHS9 363 aa8.68□□□□□ -1.02
USP6NL-203ENST00000443016 HAUS1Q96CS2 278 aa8.68□□□□□ -1.02
USP6NL-203ENST00000443016 IMP4Q96G21 291 aaKnown RBP8.68□□□□□ -1.02
USP6NL-203ENST00000443016 MS4A14Q96JA4 679 aa8.68□□□□□ -1.02
USP6NL-203ENST00000443016 RUNDC3BQ96NL0 473 aa8.68□□□□□ -1.02
USP6NL-203ENST00000443016 HEMGNQ9BXL5 484 aa8.68□□□□□ -1.02
USP6NL-203ENST00000443016 UBP1Q9NZI7 540 aa8.68□□□□□ -1.02
USP6NL-203ENST00000443016 PISDQ9UG56 409 aa8.68□□□□□ -1.02
USP6NL-203ENST00000443016 TAGLN3Q9UI15 199 aa8.68□□□□□ -1.02
USP6NL-203ENST00000443016 PLEKHM1Q9Y4G2 1056 aa8.68□□□□□ -1.02
USP6NL-203ENST00000443016 SPTA1P02549 2419 aa8.67□□□□□ -1.02
USP6NL-203ENST00000443016 RGSL1A5PLK6 1076 aa8.67□□□□□ -1.02
USP6NL-203ENST00000443016 APOC4-APOC2K7ER74 178 aa8.67□□□□□ -1.02
USP6NL-203ENST00000443016 LRP4O75096 1905 aa8.67□□□□□ -1.02
USP6NL-203ENST00000443016 SLC25A14O95258 325 aaPredicted RBP8.67□□□□□ -1.02
USP6NL-203ENST00000443016 APOC2P02655 101 aa8.67□□□□□ -1.02
USP6NL-203ENST00000443016 CCKBRP32239 447 aa8.67□□□□□ -1.02
USP6NL-203ENST00000443016 UGT1A5P35504 534 aa8.67□□□□□ -1.02
USP6NL-203ENST00000443016 SOWAHCQ53LP3 525 aaPredicted RBP8.67□□□□□ -1.02
USP6NL-203ENST00000443016 ARHGAP40Q5TG30 622 aa8.67□□□□□ -1.02
USP6NL-203ENST00000443016 AADACL2Q6P093 401 aa8.67□□□□□ -1.02
USP6NL-203ENST00000443016 BOD1L1Q8NFC6 3051 aa8.67□□□□□ -1.02
USP6NL-203ENST00000443016 GCN1Q92616 2671 aaKnown RBP8.67□□□□□ -1.02
USP6NL-203ENST00000443016 AHCYL2Q96HN2 611 aaKnown RBP8.67□□□□□ -1.02
USP6NL-203ENST00000443016 FERMT1Q9BQL6 677 aa8.67□□□□□ -1.02
USP6NL-203ENST00000443016 CENPOQ9BU64 300 aa8.67□□□□□ -1.02
USP6NL-203ENST00000443016 STN1Q9H668 368 aaKnown RBP8.67□□□□□ -1.02
USP6NL-203ENST00000443016 GLOD4Q9HC38 313 aa8.67□□□□□ -1.02
USP6NL-203ENST00000443016 CPNE5Q9HCH3 593 aa8.67□□□□□ -1.02
USP6NL-203ENST00000443016 GEMIN8Q9NWZ8 242 aaKnown RBP8.67□□□□□ -1.02
USP6NL-203ENST00000443016 VPS18Q9P253 973 aa8.67□□□□□ -1.02
USP6NL-203ENST00000443016 KLHL8Q9P2G9 620 aaPredicted RBP8.67□□□□□ -1.02
USP6NL-203ENST00000443016 LOXL2Q9Y4K0 774 aa8.67□□□□□ -1.02
USP6NL-203ENST00000443016 ST14Q9Y5Y6 855 aa8.67□□□□□ -1.02
USP6NL-203ENST00000443016 HELZ2Q9BYK8 2649 aaKnown RBP8.67□□□□□ -1.02
USP6NL-203ENST00000443016 MTSS1O43312 755 aa8.66□□□□□ -1.02
USP6NL-203ENST00000443016 SNX2O60749 519 aa8.66□□□□□ -1.02
USP6NL-203ENST00000443016 ACP5P13686 325 aa8.66□□□□□ -1.02
USP6NL-203ENST00000443016 PTPN3P26045 913 aa8.66□□□□□ -1.02
USP6NL-203ENST00000443016 HENMT1Q5T8I9 393 aaKnown RBP8.66□□□□□ -1.02
USP6NL-203ENST00000443016 ZNF572Q7Z3I7 529 aaPredicted RBP8.66□□□□□ -1.02
USP6NL-203ENST00000443016 TMEM159Q96B96 161 aa8.66□□□□□ -1.02
USP6NL-203ENST00000443016 SCARF2Q96GP6 870 aaPredicted RBP8.66□□□□□ -1.02
USP6NL-203ENST00000443016 PRR11Q96HE9 360 aaPredicted RBP8.66□□□□□ -1.02
USP6NL-203ENST00000443016 COX14Q96I36 57 aa8.66□□□□□ -1.02
USP6NL-203ENST00000443016 TEKT5Q96M29 485 aa8.66□□□□□ -1.02
USP6NL-203ENST00000443016 UBL7Q96S82 380 aaPredicted RBP8.66□□□□□ -1.02
USP6NL-203ENST00000443016 SLC38A3Q99624 504 aa8.66□□□□□ -1.02
USP6NL-203ENST00000443016 ZSCAN5AQ9BUG6 496 aa8.66□□□□□ -1.02
USP6NL-203ENST00000443016 PRORYQ9H606 182 aa8.66□□□□□ -1.02
USP6NL-203ENST00000443016 MAGEE1Q9HCI5 957 aa8.66□□□□□ -1.02
USP6NL-203ENST00000443016 ARFGAP3Q9NP61 516 aa8.66□□□□□ -1.02
USP6NL-203ENST00000443016 KCNK4Q9NYG8 393 aa8.66□□□□□ -1.02
USP6NL-203ENST00000443016 TEX51A0A1B0GUA7 166 aa8.66□□□□□ -1.02
USP6NL-203ENST00000443016 FADS2P1A8MWK0 482 aa8.66□□□□□ -1.02
USP6NL-203ENST00000443016 CDRT15L2A8MXV6 281 aa8.66□□□□□ -1.02
USP6NL-203ENST00000443016 F5H423 210 aaPredicted RBP8.66□□□□□ -1.02
USP6NL-203ENST00000443016 B4GAT1O43505 415 aa8.66□□□□□ -1.02
USP6NL-203ENST00000443016 NDST3O95803 873 aa8.66□□□□□ -1.02
USP6NL-203ENST00000443016 PECAM1P16284 738 aaPredicted RBP8.66□□□□□ -1.02
USP6NL-203ENST00000443016 ITIH1P19827 911 aa8.66□□□□□ -1.02
USP6NL-203ENST00000443016 SLC5A2P31639 672 aa8.66□□□□□ -1.02
USP6NL-203ENST00000443016 GPR3P46089 330 aa8.66□□□□□ -1.02
USP6NL-203ENST00000443016 MAPK10P53779 464 aa8.66□□□□□ -1.02
USP6NL-203ENST00000443016 TUBB4BP68371 445 aa8.66□□□□□ -1.02
USP6NL-203ENST00000443016 B4GALNT1Q00973 533 aa8.66□□□□□ -1.02
USP6NL-203ENST00000443016 KLF1Q13351 362 aaPredicted RBP8.66□□□□□ -1.02
USP6NL-203ENST00000443016 TOMM20Q15388 145 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms