RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 HAUS8Q9BT25 410 aa14.05□□□□□ -0.16
LIMD1-202ENST00000440097 SARS2Q9NP81 518 aaKnown RBP14.05□□□□□ -0.16
LIMD1-202ENST00000440097 TAS2R13Q9NYV9 303 aa14.05□□□□□ -0.16
LIMD1-202ENST00000440097 CCL26Q9Y258 94 aa14.05□□□□□ -0.16
LIMD1-202ENST00000440097 RNF11Q9Y3C5 154 aa14.05□□□□□ -0.16
LIMD1-202ENST00000440097 OR51B4Q9Y5P0 310 aa14.05□□□□□ -0.16
LIMD1-202ENST00000440097 ANKRD36A6QL64 1941 aa14.04□□□□□ -0.16
LIMD1-202ENST00000440097 PRSS51A0A1B0GVH4 220 aa14.04□□□□□ -0.16
LIMD1-202ENST00000440097 GPR39O43194 453 aa14.04□□□□□ -0.16
LIMD1-202ENST00000440097 CD70P32970 193 aa14.04□□□□□ -0.16
LIMD1-202ENST00000440097 SLC7A9P82251 487 aa14.04□□□□□ -0.16
LIMD1-202ENST00000440097 BCL2L1Q07817 233 aa14.04□□□□□ -0.16
LIMD1-202ENST00000440097 NRF1Q16656 503 aa14.04□□□□□ -0.16
LIMD1-202ENST00000440097 GEN1Q17RS7 908 aa14.04□□□□□ -0.16
LIMD1-202ENST00000440097 PSAPL1Q6NUJ1 521 aa14.04□□□□□ -0.16
LIMD1-202ENST00000440097 LILRA6Q6PI73 481 aa14.04□□□□□ -0.16
LIMD1-202ENST00000440097 HTR3DQ70Z44 454 aa14.04□□□□□ -0.16
LIMD1-202ENST00000440097 ZNF513Q8N8E2 541 aaPredicted RBP14.04□□□□□ -0.16
LIMD1-202ENST00000440097 MYO19Q96H55 970 aa14.04□□□□□ -0.16
LIMD1-202ENST00000440097 KLHL32Q96NJ5 620 aa14.04□□□□□ -0.16
LIMD1-202ENST00000440097 KIAA1522Q9P206 1035 aaPredicted RBP14.04□□□□□ -0.16
LIMD1-202ENST00000440097 CDYLQ9Y232 598 aa14.04□□□□□ -0.16
LIMD1-202ENST00000440097 TMEM221A6NGB7 291 aa14.04□□□□□ -0.16
LIMD1-202ENST00000440097 GOLGA8CPA6NN73 597 aa14.04□□□□□ -0.16
LIMD1-202ENST00000440097 ZNF37AP17032 561 aaPredicted RBP14.04□□□□□ -0.16
LIMD1-202ENST00000440097 FDXRP22570 491 aa14.04□□□□□ -0.16
LIMD1-202ENST00000440097 CCR2P41597 374 aa14.04□□□□□ -0.16
LIMD1-202ENST00000440097 CD97P48960 835 aa14.04□□□□□ -0.16
LIMD1-202ENST00000440097 SLC44A4Q53GD3 710 aa14.04□□□□□ -0.16
LIMD1-202ENST00000440097 LYSMD3Q7Z3D4 306 aa14.04□□□□□ -0.16
LIMD1-202ENST00000440097 CHERPQ8IWX8 916 aaKnown RBP14.04□□□□□ -0.16
LIMD1-202ENST00000440097 LSMEM2Q8N112 164 aa14.04□□□□□ -0.16
LIMD1-202ENST00000440097 POF1BQ8WVV4 589 aa14.04□□□□□ -0.16
LIMD1-202ENST00000440097 ACDQ96AP0 544 aa14.04□□□□□ -0.16
LIMD1-202ENST00000440097 RCN3Q96D15 328 aa14.04□□□□□ -0.16
LIMD1-202ENST00000440097 TCEAL4Q96EI5 215 aa14.04□□□□□ -0.16
LIMD1-202ENST00000440097 AARSD1Q9BTE6 412 aaKnown RBP14.04□□□□□ -0.16
LIMD1-202ENST00000440097 ABCB8Q9NUT2 735 aa14.04□□□□□ -0.16
LIMD1-202ENST00000440097 INTS10Q9NVR2 710 aaKnown RBP14.04□□□□□ -0.16
LIMD1-202ENST00000440097 STX16-NPEPL1H3BU86 382 aa14.03□□□□□ -0.16
LIMD1-202ENST00000440097 OR1I1O60431 355 aa14.03□□□□□ -0.16
LIMD1-202ENST00000440097 RNASEH2AO75792 299 aaKnown RBP14.03□□□□□ -0.16
LIMD1-202ENST00000440097 JUNP05412 331 aaKnown RBP14.03□□□□□ -0.16
LIMD1-202ENST00000440097 ENO3P13929 434 aaPredicted RBP14.03□□□□□ -0.16
LIMD1-202ENST00000440097 ENTPD1P49961 510 aa14.03□□□□□ -0.16
LIMD1-202ENST00000440097 HTRA4P83105 476 aaPredicted RBP14.03□□□□□ -0.16
LIMD1-202ENST00000440097 PFKPQ01813 784 aa14.03□□□□□ -0.16
LIMD1-202ENST00000440097 ZNF697Q5TEC3 545 aa14.03□□□□□ -0.16
LIMD1-202ENST00000440097 Q6ZNX1 250 aa14.03□□□□□ -0.16
LIMD1-202ENST00000440097 ISCA2Q86U28 154 aa14.03□□□□□ -0.16
LIMD1-202ENST00000440097 PIANPQ8IYJ0 282 aa14.03□□□□□ -0.16
LIMD1-202ENST00000440097 TMEM102Q8N9M5 508 aaPredicted RBP14.03□□□□□ -0.16
LIMD1-202ENST00000440097 LRRC3Q9BY71 257 aa14.03□□□□□ -0.16
LIMD1-202ENST00000440097 EML4Q9HC35 981 aaKnown RBP14.03□□□□□ -0.16
LIMD1-202ENST00000440097 TBCCD1Q9NVR7 557 aa14.03□□□□□ -0.16
LIMD1-202ENST00000440097 TSR3Q9UJK0 312 aaKnown RBP14.03□□□□□ -0.16
LIMD1-202ENST00000440097 RIMKLBQ9ULI2 386 aa14.03□□□□□ -0.16
LIMD1-202ENST00000440097 SLC30A1Q9Y6M5 507 aa14.03□□□□□ -0.16
LIMD1-202ENST00000440097 C7orf72A4D263 438 aa14.03□□□□□ -0.16
LIMD1-202ENST00000440097 E5RI56 91 aa14.03□□□□□ -0.16
LIMD1-202ENST00000440097 GFAPP14136 432 aa14.03□□□□□ -0.16
LIMD1-202ENST00000440097 HOXB8P17481 243 aaPredicted RBP14.03□□□□□ -0.16
LIMD1-202ENST00000440097 CHRM3P20309 590 aa14.03□□□□□ -0.16
LIMD1-202ENST00000440097 DPP6P42658 865 aa14.03□□□□□ -0.16
LIMD1-202ENST00000440097 STK19P49842 368 aaPredicted RBP14.03□□□□□ -0.16
LIMD1-202ENST00000440097 AP1S1P61966 158 aa14.03□□□□□ -0.16
LIMD1-202ENST00000440097 TYSND1Q2T9J0 566 aa14.03□□□□□ -0.16
LIMD1-202ENST00000440097 PAQR3Q6TCH7 311 aa14.03□□□□□ -0.16
LIMD1-202ENST00000440097 PATL1Q86TB9 770 aaKnown RBP14.03□□□□□ -0.16
LIMD1-202ENST00000440097 SLC22A9Q8IVM8 553 aa14.03□□□□□ -0.16
LIMD1-202ENST00000440097 GPR65Q8IYL9 337 aa14.03□□□□□ -0.16
LIMD1-202ENST00000440097 CLP1Q92989 425 aaKnown RBP14.03□□□□□ -0.16
LIMD1-202ENST00000440097 PTERQ96BW5 349 aa14.03□□□□□ -0.16
LIMD1-202ENST00000440097 ALG14Q96F25 216 aa14.03□□□□□ -0.16
LIMD1-202ENST00000440097 MARK4Q96L34 752 aa14.03□□□□□ -0.16
LIMD1-202ENST00000440097 RAD9AQ99638 391 aa14.03□□□□□ -0.16
LIMD1-202ENST00000440097 CAAP1Q9H8G2 361 aa14.03□□□□□ -0.16
LIMD1-202ENST00000440097 EPS15L1Q9UBC2 864 aa14.03□□□□□ -0.16
LIMD1-202ENST00000440097 VTI1BQ9UEU0 232 aa14.03□□□□□ -0.16
LIMD1-202ENST00000440097 PLXNA4Q9HCM2 1894 aa14.03□□□□□ -0.16
LIMD1-202ENST00000440097 C1orf232A0A0U1RR37 186 aa14.02□□□□□ -0.16
LIMD1-202ENST00000440097 SH3PXD2BA1X283 911 aa14.02□□□□□ -0.16
LIMD1-202ENST00000440097 RGSL1A5PLK6 1076 aa14.02□□□□□ -0.16
LIMD1-202ENST00000440097 NEDD8-MDP1E9PL57 170 aa14.02□□□□□ -0.16
LIMD1-202ENST00000440097 SLCO1B7G3V0H7 640 aa14.02□□□□□ -0.16
LIMD1-202ENST00000440097 NPHS1O60500 1241 aa14.02□□□□□ -0.16
LIMD1-202ENST00000440097 PRAMEF12O95522 483 aa14.02□□□□□ -0.16
LIMD1-202ENST00000440097 CAPNS1P04632 268 aa14.02□□□□□ -0.16
LIMD1-202ENST00000440097 LINC00271P0C7V0 271 aa14.02□□□□□ -0.16
LIMD1-202ENST00000440097 ZNF26P17031 533 aaPredicted RBP14.02□□□□□ -0.16
LIMD1-202ENST00000440097 ALDH3B2P48448 385 aa14.02□□□□□ -0.16
LIMD1-202ENST00000440097 KCNC1P48547 511 aa14.02□□□□□ -0.16
LIMD1-202ENST00000440097 TTPAP49638 278 aa14.02□□□□□ -0.16
LIMD1-202ENST00000440097 C16orf72Q14CZ0 275 aa14.02□□□□□ -0.16
LIMD1-202ENST00000440097 TEAD2Q15562 447 aa14.02□□□□□ -0.16
LIMD1-202ENST00000440097 PFKFB4Q16877 469 aa14.02□□□□□ -0.16
LIMD1-202ENST00000440097 PLEKHG6Q3KR16 790 aa14.02□□□□□ -0.16
LIMD1-202ENST00000440097 LSM12Q3MHD2 195 aaKnown RBP14.02□□□□□ -0.16
LIMD1-202ENST00000440097 CROCCP3Q8IVE0 287 aa14.02□□□□□ -0.16
LIMD1-202ENST00000440097 MRPL43Q8N983 215 aaKnown RBP14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms