RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 A8MX80 341 aa13.42□□□□□ -0.26
HERPUD1-204ENST00000439977 INSIG1O15503 277 aa13.42□□□□□ -0.26
HERPUD1-204ENST00000439977 SEPT4O43236 478 aa13.42□□□□□ -0.26
HERPUD1-204ENST00000439977 MATN4O95460 622 aa13.42□□□□□ -0.26
HERPUD1-204ENST00000439977 ESRRBO95718 433 aa13.42□□□□□ -0.26
HERPUD1-204ENST00000439977 CKBP12277 381 aa13.42□□□□□ -0.26
HERPUD1-204ENST00000439977 OGNP20774 298 aaKnown RBP13.42□□□□□ -0.26
HERPUD1-204ENST00000439977 YBEYP58557 167 aaPredicted RBP13.42□□□□□ -0.26
HERPUD1-204ENST00000439977 ERVPABLB-1P60509 514 aa13.42□□□□□ -0.26
HERPUD1-204ENST00000439977 CREB5Q02930 508 aa13.42□□□□□ -0.26
HERPUD1-204ENST00000439977 PRKCZQ05513 592 aa13.42□□□□□ -0.26
HERPUD1-204ENST00000439977 TWF1Q12792 350 aa13.42□□□□□ -0.26
HERPUD1-204ENST00000439977 TMED1Q13445 227 aa13.42□□□□□ -0.26
HERPUD1-204ENST00000439977 RCAN2Q14206 197 aa13.42□□□□□ -0.26
HERPUD1-204ENST00000439977 CTSL3PQ5NE16 218 aa13.42□□□□□ -0.26
HERPUD1-204ENST00000439977 RTP2Q5QGT7 225 aa13.42□□□□□ -0.26
HERPUD1-204ENST00000439977 SCUBE2Q9NQ36 999 aa13.42□□□□□ -0.26
HERPUD1-204ENST00000439977 AIG1Q9NVV5 245 aa13.42□□□□□ -0.26
HERPUD1-204ENST00000439977 FADS3Q9Y5Q0 445 aa13.42□□□□□ -0.26
HERPUD1-204ENST00000439977 SNAP91O60641 907 aa13.41□□□□□ -0.26
HERPUD1-204ENST00000439977 VNN2O95498 520 aa13.41□□□□□ -0.26
HERPUD1-204ENST00000439977 TSPAN12O95859 305 aa13.41□□□□□ -0.26
HERPUD1-204ENST00000439977 CHEK2O96017 543 aa13.41□□□□□ -0.26
HERPUD1-204ENST00000439977 EPOP01588 193 aa13.41□□□□□ -0.26
HERPUD1-204ENST00000439977 RPS17P08708 135 aaKnown RBP13.41□□□□□ -0.26
HERPUD1-204ENST00000439977 PKMP14618 531 aaKnown RBP13.41□□□□□ -0.26
HERPUD1-204ENST00000439977 CTPS1P17812 591 aa13.41□□□□□ -0.26
HERPUD1-204ENST00000439977 OXCT1P55809 520 aa13.41□□□□□ -0.26
HERPUD1-204ENST00000439977 CAP1Q01518 475 aa13.41□□□□□ -0.26
HERPUD1-204ENST00000439977 NEDD8Q15843 81 aa13.41□□□□□ -0.26
HERPUD1-204ENST00000439977 C6orf136Q5SQH8 315 aa13.41□□□□□ -0.26
HERPUD1-204ENST00000439977 IL27RAQ6UWB1 636 aa13.41□□□□□ -0.26
HERPUD1-204ENST00000439977 Q6ZSR9 355 aa13.41□□□□□ -0.26
HERPUD1-204ENST00000439977 GPR141Q7Z602 305 aa13.41□□□□□ -0.26
HERPUD1-204ENST00000439977 NLRC5Q86WI3 1866 aa13.41□□□□□ -0.26
HERPUD1-204ENST00000439977 PROKR1Q8TCW9 393 aa13.41□□□□□ -0.26
HERPUD1-204ENST00000439977 HSPBAP1Q96EW2 488 aa13.41□□□□□ -0.26
HERPUD1-204ENST00000439977 CHID1Q9BWS9 393 aa13.41□□□□□ -0.26
HERPUD1-204ENST00000439977 SEPT3Q9UH03 358 aa13.41□□□□□ -0.26
HERPUD1-204ENST00000439977 SUN2Q9UH99 717 aa13.41□□□□□ -0.26
HERPUD1-204ENST00000439977 PADI4Q9UM07 663 aa13.41□□□□□ -0.26
HERPUD1-204ENST00000439977 RAI2Q9Y5P3 530 aa13.41□□□□□ -0.26
HERPUD1-204ENST00000439977 SCN10AQ9Y5Y9 1956 aa13.41□□□□□ -0.26
HERPUD1-204ENST00000439977 ADAM12O43184 909 aa13.41□□□□□ -0.26
HERPUD1-204ENST00000439977 CAPN1P07384 714 aa13.41□□□□□ -0.26
HERPUD1-204ENST00000439977 G6PDP11413 515 aa13.41□□□□□ -0.26
HERPUD1-204ENST00000439977 GDF5P43026 501 aa13.41□□□□□ -0.26
HERPUD1-204ENST00000439977 CDK9P50750 372 aaKnown RBP13.41□□□□□ -0.26
HERPUD1-204ENST00000439977 BNIP2Q12982 314 aa13.41□□□□□ -0.26
HERPUD1-204ENST00000439977 ADRM1Q16186 407 aa13.41□□□□□ -0.26
HERPUD1-204ENST00000439977 DNAJC14Q6Y2X3 702 aaPredicted RBP13.41□□□□□ -0.26
HERPUD1-204ENST00000439977 NAT16Q8N8M0 369 aa13.41□□□□□ -0.26
HERPUD1-204ENST00000439977 METTL6Q8TCB7 284 aa13.41□□□□□ -0.26
HERPUD1-204ENST00000439977 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.41□□□□□ -0.26
HERPUD1-204ENST00000439977 BIRC7Q96CA5 298 aa13.41□□□□□ -0.26
HERPUD1-204ENST00000439977 MGME1Q9BQP7 344 aa13.41□□□□□ -0.26
HERPUD1-204ENST00000439977 NAA50Q9GZZ1 169 aaKnown RBP13.41□□□□□ -0.26
HERPUD1-204ENST00000439977 SMPD4Q9NXE4 827 aa13.41□□□□□ -0.26
HERPUD1-204ENST00000439977 AGO1Q9UL18 857 aaKnown RBP13.41□□□□□ -0.26
HERPUD1-204ENST00000439977 PHF24Q9UPV7 400 aa13.41□□□□□ -0.26
HERPUD1-204ENST00000439977 TDRD15B5MCY1 1934 aaKnown RBP13.41□□□□□ -0.26
HERPUD1-204ENST00000439977 E2F3O00716 465 aa13.4□□□□□ -0.26
HERPUD1-204ENST00000439977 FFAR3O14843 346 aa13.4□□□□□ -0.26
HERPUD1-204ENST00000439977 GPR42O15529 346 aa13.4□□□□□ -0.26
HERPUD1-204ENST00000439977 PFDN1O60925 122 aa13.4□□□□□ -0.26
HERPUD1-204ENST00000439977 VPS26AO75436 327 aa13.4□□□□□ -0.26
HERPUD1-204ENST00000439977 KLKB1P03952 638 aa13.4□□□□□ -0.26
HERPUD1-204ENST00000439977 VARSP26640 1264 aaKnown RBP13.4□□□□□ -0.26
HERPUD1-204ENST00000439977 CLCN2P51788 898 aa13.4□□□□□ -0.26
HERPUD1-204ENST00000439977 IST1P53990 364 aa13.4□□□□□ -0.26
HERPUD1-204ENST00000439977 SH3BGRP55822 239 aaPredicted RBP13.4□□□□□ -0.26
HERPUD1-204ENST00000439977 IL2P60568 153 aa13.4□□□□□ -0.26
HERPUD1-204ENST00000439977 TGFBIQ15582 683 aa13.4□□□□□ -0.26
HERPUD1-204ENST00000439977 SGO1Q5FBB7 561 aa13.4□□□□□ -0.26
HERPUD1-204ENST00000439977 GPR107Q5VW38 600 aa13.4□□□□□ -0.26
HERPUD1-204ENST00000439977 PRMT9Q6P2P2 845 aa13.4□□□□□ -0.26
HERPUD1-204ENST00000439977 BORAQ6PGQ7 559 aa13.4□□□□□ -0.26
HERPUD1-204ENST00000439977 AFTPHQ6ULP2 937 aa13.4□□□□□ -0.26
HERPUD1-204ENST00000439977 GPRIN3Q6ZVF9 776 aa13.4□□□□□ -0.26
HERPUD1-204ENST00000439977 ABI1Q8IZP0 508 aa13.4□□□□□ -0.26
HERPUD1-204ENST00000439977 DTNBP1Q96EV8 351 aa13.4□□□□□ -0.26
HERPUD1-204ENST00000439977 PSKH2Q96QS6 385 aa13.4□□□□□ -0.26
HERPUD1-204ENST00000439977 C9orf16Q9BUW7 83 aa13.4□□□□□ -0.26
HERPUD1-204ENST00000439977 INTS10Q9NVR2 710 aaKnown RBP13.4□□□□□ -0.26
HERPUD1-204ENST00000439977 THEGQ9P2T0 379 aa13.4□□□□□ -0.26
HERPUD1-204ENST00000439977 ANAPC2Q9UJX6 822 aa13.4□□□□□ -0.26
HERPUD1-204ENST00000439977 MYO16Q9Y6X6 1858 aa13.4□□□□□ -0.26
HERPUD1-204ENST00000439977 SYCE1LA8MT33 242 aa13.4□□□□□ -0.26
HERPUD1-204ENST00000439977 FAM155AB1AL88 458 aaPredicted RBP13.4□□□□□ -0.26
HERPUD1-204ENST00000439977 STX7O15400 261 aaKnown RBP13.4□□□□□ -0.26
HERPUD1-204ENST00000439977 RSL1D1O76021 490 aaKnown RBP13.4□□□□□ -0.26
HERPUD1-204ENST00000439977 IGLV3-27P01718 113 aa13.4□□□□□ -0.26
HERPUD1-204ENST00000439977 UROSP10746 265 aa13.4□□□□□ -0.26
HERPUD1-204ENST00000439977 PRKAR2AP13861 404 aaKnown RBP13.4□□□□□ -0.26
HERPUD1-204ENST00000439977 HRH2P25021 359 aa13.4□□□□□ -0.26
HERPUD1-204ENST00000439977 RFC2P35250 354 aa13.4□□□□□ -0.26
HERPUD1-204ENST00000439977 MAPKAPK2P49137 400 aa13.4□□□□□ -0.26
HERPUD1-204ENST00000439977 ESRRGP62508 458 aa13.4□□□□□ -0.26
HERPUD1-204ENST00000439977 SEMG2Q02383 582 aa13.4□□□□□ -0.26
HERPUD1-204ENST00000439977 PMS2P3Q13401 168 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms