RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 VIPP01282 170 aa10.32□□□□□ -0.76
MCF2L-216ENST00000439475 MPOP05164 745 aa10.32□□□□□ -0.76
MCF2L-216ENST00000439475 HALP42357 657 aa10.32□□□□□ -0.76
MCF2L-216ENST00000439475 OR1D5P58170 312 aa10.32□□□□□ -0.76
MCF2L-216ENST00000439475 ERVPABLB-1P60509 514 aa10.32□□□□□ -0.76
MCF2L-216ENST00000439475 TMPRSS15P98073 1019 aa10.32□□□□□ -0.76
MCF2L-216ENST00000439475 NR1D2Q14995 579 aa10.32□□□□□ -0.76
MCF2L-216ENST00000439475 AMZ1Q400G9 498 aa10.32□□□□□ -0.76
MCF2L-216ENST00000439475 GPR33Q49SQ1 333 aa10.32□□□□□ -0.76
MCF2L-216ENST00000439475 GPRC6AQ5T6X5 926 aa10.32□□□□□ -0.76
MCF2L-216ENST00000439475 DENND5AQ6IQ26 1287 aa10.32□□□□□ -0.76
MCF2L-216ENST00000439475 FOXR1Q6PIV2 292 aa10.32□□□□□ -0.76
MCF2L-216ENST00000439475 TMEM220Q6QAJ8 160 aa10.32□□□□□ -0.76
MCF2L-216ENST00000439475 RAB11FIP2Q7L804 512 aa10.32□□□□□ -0.76
MCF2L-216ENST00000439475 ZNF438Q7Z4V0 828 aa10.32□□□□□ -0.76
MCF2L-216ENST00000439475 SNX20Q7Z614 316 aa10.32□□□□□ -0.76
MCF2L-216ENST00000439475 AMZ2Q86W34 360 aa10.32□□□□□ -0.76
MCF2L-216ENST00000439475 TRIM48Q8IWZ4 208 aa10.32□□□□□ -0.76
MCF2L-216ENST00000439475 SFRP1Q8N474 314 aa10.32□□□□□ -0.76
MCF2L-216ENST00000439475 FBXO39Q8N4B4 442 aa10.32□□□□□ -0.76
MCF2L-216ENST00000439475 BEND7Q8N7W2 519 aaPredicted RBP10.32□□□□□ -0.76
MCF2L-216ENST00000439475 OR10G6Q8NH81 332 aa10.32□□□□□ -0.76
MCF2L-216ENST00000439475 SLC37A2Q8TED4 501 aa10.32□□□□□ -0.76
MCF2L-216ENST00000439475 PATE1Q8WXA2 126 aa10.32□□□□□ -0.76
MCF2L-216ENST00000439475 CCDC97Q96F63 343 aaPredicted RBP10.32□□□□□ -0.76
MCF2L-216ENST00000439475 ATXN7L3BQ96GX2 97 aa10.32□□□□□ -0.76
MCF2L-216ENST00000439475 LIN37Q96GY3 246 aaPredicted RBP10.32□□□□□ -0.76
MCF2L-216ENST00000439475 TTC1Q99614 292 aa10.32□□□□□ -0.76
MCF2L-216ENST00000439475 ZMYND15Q9H091 742 aa10.32□□□□□ -0.76
MCF2L-216ENST00000439475 EPB41L5Q9HCM4 733 aa10.32□□□□□ -0.76
MCF2L-216ENST00000439475 RAB6BQ9NRW1 208 aa10.32□□□□□ -0.76
MCF2L-216ENST00000439475 THSD1Q9NS62 852 aa10.32□□□□□ -0.76
MCF2L-216ENST00000439475 SMOXQ9NWM0 555 aa10.32□□□□□ -0.76
MCF2L-216ENST00000439475 TBC1D29Q9UFV1 150 aa10.32□□□□□ -0.76
MCF2L-216ENST00000439475 FKBPLQ9UIM3 349 aa10.32□□□□□ -0.76
MCF2L-216ENST00000439475 ATXN7L1Q9ULK2 861 aaPredicted RBP10.32□□□□□ -0.76
MCF2L-216ENST00000439475 SATB2Q9UPW6 733 aa10.32□□□□□ -0.76
MCF2L-216ENST00000439475 DNAJC16Q9Y2G8 782 aa10.32□□□□□ -0.76
MCF2L-216ENST00000439475 ST14Q9Y5Y6 855 aa10.32□□□□□ -0.76
MCF2L-216ENST00000439475 WDR87Q6ZQQ6 2873 aa10.31□□□□□ -0.76
MCF2L-216ENST00000439475 HEATR9A2RTY3 570 aa10.31□□□□□ -0.76
MCF2L-216ENST00000439475 F8W8V4 182 aa10.31□□□□□ -0.76
MCF2L-216ENST00000439475 H7C0S8 307 aa10.31□□□□□ -0.76
MCF2L-216ENST00000439475 TAF4O00268 1085 aa10.31□□□□□ -0.76
MCF2L-216ENST00000439475 LDB2O43679 373 aa10.31□□□□□ -0.76
MCF2L-216ENST00000439475 POP7O75817 140 aaKnown RBP10.31□□□□□ -0.76
MCF2L-216ENST00000439475 DXOO77932 396 aaKnown RBP10.31□□□□□ -0.76
MCF2L-216ENST00000439475 JMJD7P0C870 316 aa10.31□□□□□ -0.76
MCF2L-216ENST00000439475 TPH1P17752 444 aa10.31□□□□□ -0.76
MCF2L-216ENST00000439475 XRCC1P18887 633 aaPredicted RBP10.31□□□□□ -0.76
MCF2L-216ENST00000439475 ADRA1DP25100 572 aa10.31□□□□□ -0.76
MCF2L-216ENST00000439475 MC4RP32245 332 aa10.31□□□□□ -0.76
MCF2L-216ENST00000439475 CXCR5P32302 372 aa10.31□□□□□ -0.76
MCF2L-216ENST00000439475 SARNPP82979 210 aaKnown RBP10.31□□□□□ -0.76
MCF2L-216ENST00000439475 MSLNQ13421 630 aaPredicted RBP10.31□□□□□ -0.76
MCF2L-216ENST00000439475 SQSTM1Q13501 440 aa10.31□□□□□ -0.76
MCF2L-216ENST00000439475 OLIG2Q13516 323 aa10.31□□□□□ -0.76
MCF2L-216ENST00000439475 TRA2AQ13595 282 aaKnown RBP eCLIP10.31□□□□□ -0.76
MCF2L-216ENST00000439475 SEPT6Q14141 434 aa10.31□□□□□ -0.76
MCF2L-216ENST00000439475 PTPRCAPQ14761 206 aa10.31□□□□□ -0.76
MCF2L-216ENST00000439475 POU6F1Q14863 301 aa10.31□□□□□ -0.76
MCF2L-216ENST00000439475 TBC1D25Q3MII6 688 aa10.31□□□□□ -0.76
MCF2L-216ENST00000439475 ZRANB3Q5FWF4 1079 aa10.31□□□□□ -0.76
MCF2L-216ENST00000439475 PHF19Q5T6S3 580 aa10.31□□□□□ -0.76
MCF2L-216ENST00000439475 ZNF449Q6P9G9 518 aa10.31□□□□□ -0.76
MCF2L-216ENST00000439475 IGF2-ASQ6U949 168 aa10.31□□□□□ -0.76
MCF2L-216ENST00000439475 ABRAXAS1Q6UWZ7 409 aa10.31□□□□□ -0.76
MCF2L-216ENST00000439475 WASH2PQ6VEQ5 465 aa10.31□□□□□ -0.76
MCF2L-216ENST00000439475 USP53Q70EK8 1073 aa10.31□□□□□ -0.76
MCF2L-216ENST00000439475 SFTPA2Q8IWL1 248 aa10.31□□□□□ -0.76
MCF2L-216ENST00000439475 RBM12BQ8IXT5 1001 aaKnown RBP10.31□□□□□ -0.76
MCF2L-216ENST00000439475 TAB3Q8N5C8 712 aaPredicted RBP10.31□□□□□ -0.76
MCF2L-216ENST00000439475 ZNF248Q8NDW4 579 aa10.31□□□□□ -0.76
MCF2L-216ENST00000439475 OR52K1Q8NGK4 314 aa10.31□□□□□ -0.76
MCF2L-216ENST00000439475 OR13C4Q8NGS5 318 aa10.31□□□□□ -0.76
MCF2L-216ENST00000439475 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.31□□□□□ -0.76
MCF2L-216ENST00000439475 CDKN2AIPNLQ96HQ2 116 aa10.31□□□□□ -0.76
MCF2L-216ENST00000439475 COPS8Q99627 209 aa10.31□□□□□ -0.76
MCF2L-216ENST00000439475 EPB41L1Q9H4G0 881 aa10.31□□□□□ -0.76
MCF2L-216ENST00000439475 WASH6PQ9NQA3 447 aa10.31□□□□□ -0.76
MCF2L-216ENST00000439475 PRDM8Q9NQV8 689 aa10.31□□□□□ -0.76
MCF2L-216ENST00000439475 NLE1Q9NVX2 485 aaPredicted RBP10.31□□□□□ -0.76
MCF2L-216ENST00000439475 CPNE7Q9UBL6 633 aa10.31□□□□□ -0.76
MCF2L-216ENST00000439475 TMPRSS11EQ9UL52 423 aa10.31□□□□□ -0.76
MCF2L-216ENST00000439475 PCYT1BQ9Y5K3 369 aaPredicted RBP10.31□□□□□ -0.76
MCF2L-216ENST00000439475 SCN8AQ9UQD0 1980 aa10.3□□□□□ -0.76
MCF2L-216ENST00000439475 URB1O60287 2271 aaKnown RBP10.3□□□□□ -0.76
MCF2L-216ENST00000439475 IGHV1OR21-1A0A087WYE8 117 aa10.3□□□□□ -0.76
MCF2L-216ENST00000439475 OR2AG2A6NM03 316 aa10.3□□□□□ -0.76
MCF2L-216ENST00000439475 AGAP14A8MT82 685 aa10.3□□□□□ -0.76
MCF2L-216ENST00000439475 QSOX1O00391 747 aa10.3□□□□□ -0.76
MCF2L-216ENST00000439475 PLD2O14939 933 aa10.3□□□□□ -0.76
MCF2L-216ENST00000439475 DUX1O43812 170 aa10.3□□□□□ -0.76
MCF2L-216ENST00000439475 SUN1O94901 812 aa10.3□□□□□ -0.76
MCF2L-216ENST00000439475 TNFSF15O95150 251 aa10.3□□□□□ -0.76
MCF2L-216ENST00000439475 APRTP07741 180 aa10.3□□□□□ -0.76
MCF2L-216ENST00000439475 AMD1P17707 334 aa10.3□□□□□ -0.76
MCF2L-216ENST00000439475 CD1CP29017 333 aa10.3□□□□□ -0.76
MCF2L-216ENST00000439475 PPARGP37231 505 aaPredicted RBP10.3□□□□□ -0.76
MCF2L-216ENST00000439475 EPHA4P54764 986 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms