RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 OTUB2Q96DC9 234 aa11.98□□□□□ -0.49
NEK1-201ENST00000439128 ZSCAN5AQ9BUG6 496 aa11.98□□□□□ -0.49
NEK1-201ENST00000439128 HCN2Q9UL51 889 aa11.98□□□□□ -0.49
NEK1-201ENST00000439128 FAM25AB3EWG3 89 aa11.98□□□□□ -0.49
NEK1-201ENST00000439128 FAM25CB3EWG5 89 aa11.98□□□□□ -0.49
NEK1-201ENST00000439128 FAM25GB3EWG6 89 aa11.98□□□□□ -0.49
NEK1-201ENST00000439128 LDB2O43679 373 aa11.98□□□□□ -0.49
NEK1-201ENST00000439128 TRAPPC6AO75865 159 aa11.98□□□□□ -0.49
NEK1-201ENST00000439128 CLDN9O95484 217 aa11.98□□□□□ -0.49
NEK1-201ENST00000439128 CD48P09326 243 aa11.98□□□□□ -0.49
NEK1-201ENST00000439128 PEX5LQ8IYB4 626 aa11.98□□□□□ -0.49
NEK1-201ENST00000439128 HDAC7Q8WUI4 952 aa11.98□□□□□ -0.49
NEK1-201ENST00000439128 XAGE5Q8WWM1 108 aa11.98□□□□□ -0.49
NEK1-201ENST00000439128 TMEM125Q96AQ2 219 aa11.98□□□□□ -0.49
NEK1-201ENST00000439128 TSSK3Q96PN8 268 aa11.98□□□□□ -0.49
NEK1-201ENST00000439128 NTPCRQ9BSD7 190 aaKnown RBP11.98□□□□□ -0.49
NEK1-201ENST00000439128 RXFP1Q9HBX9 757 aa11.98□□□□□ -0.49
NEK1-201ENST00000439128 ERVK-5Q9HDB9 667 aa11.98□□□□□ -0.49
NEK1-201ENST00000439128 COPG1Q9Y678 874 aaKnown RBP11.98□□□□□ -0.49
NEK1-201ENST00000439128 GRXCR1A8MXD5 290 aa11.98□□□□□ -0.49
NEK1-201ENST00000439128 DEAF1O75398 565 aaPredicted RBP11.98□□□□□ -0.49
NEK1-201ENST00000439128 KAT7O95251 611 aa11.98□□□□□ -0.49
NEK1-201ENST00000439128 GJB5O95377 273 aa11.98□□□□□ -0.49
NEK1-201ENST00000439128 GJA5P36382 358 aa11.98□□□□□ -0.49
NEK1-201ENST00000439128 PDX1P52945 283 aa11.98□□□□□ -0.49
NEK1-201ENST00000439128 BDH2Q9BUT1 245 aa11.98□□□□□ -0.49
NEK1-201ENST00000439128 MON2Q7Z3U7 1717 aa11.98□□□□□ -0.49
NEK1-201ENST00000439128 DLDP09622 509 aaKnown RBP11.98□□□□□ -0.49
NEK1-201ENST00000439128 RYKP34925 604 aa11.98□□□□□ -0.49
NEK1-201ENST00000439128 ACVRL1P37023 503 aa11.98□□□□□ -0.49
NEK1-201ENST00000439128 POU5F1Q01860 360 aaKnown RBP11.98□□□□□ -0.49
NEK1-201ENST00000439128 CHIT1Q13231 466 aa11.98□□□□□ -0.49
NEK1-201ENST00000439128 SNX20Q7Z614 316 aa11.98□□□□□ -0.49
NEK1-201ENST00000439128 CMC1Q7Z7K0 106 aa11.98□□□□□ -0.49
NEK1-201ENST00000439128 DEFB123Q8N688 67 aa11.98□□□□□ -0.49
NEK1-201ENST00000439128 PTCD2Q8WV60 388 aaKnown RBP11.98□□□□□ -0.49
NEK1-201ENST00000439128 ZHX1-C8orf76Q96EF9 292 aa11.98□□□□□ -0.49
NEK1-201ENST00000439128 TMEM209Q96SK2 561 aa11.98□□□□□ -0.49
NEK1-201ENST00000439128 INTS10Q9NVR2 710 aaKnown RBP11.98□□□□□ -0.49
NEK1-201ENST00000439128 DHX15O43143 795 aaKnown RBP11.97□□□□□ -0.49
NEK1-201ENST00000439128 UGT1A9O60656 530 aa11.97□□□□□ -0.49
NEK1-201ENST00000439128 AP2A1O95782 977 aa11.97□□□□□ -0.49
NEK1-201ENST00000439128 UGT1A6P19224 532 aa11.97□□□□□ -0.49
NEK1-201ENST00000439128 UGT1A1P22309 533 aa11.97□□□□□ -0.49
NEK1-201ENST00000439128 UGT1A4P22310 534 aa11.97□□□□□ -0.49
NEK1-201ENST00000439128 UGT1A3P35503 534 aa11.97□□□□□ -0.49
NEK1-201ENST00000439128 UGT1A5P35504 534 aa11.97□□□□□ -0.49
NEK1-201ENST00000439128 MAGEA10P43363 369 aaPredicted RBP11.97□□□□□ -0.49
NEK1-201ENST00000439128 HNRNPH2P55795 449 aaKnown RBP11.97□□□□□ -0.49
NEK1-201ENST00000439128 UPP1Q16831 310 aa11.97□□□□□ -0.49
NEK1-201ENST00000439128 RPTNQ6XPR3 784 aa11.97□□□□□ -0.49
NEK1-201ENST00000439128 TMPRSS6Q8IU80 811 aa11.97□□□□□ -0.49
NEK1-201ENST00000439128 ZMIZ2Q8NF64 920 aa11.97□□□□□ -0.49
NEK1-201ENST00000439128 PWWP2AQ96N64 755 aa11.97□□□□□ -0.49
NEK1-201ENST00000439128 ZNF576Q9H609 170 aa11.97□□□□□ -0.49
NEK1-201ENST00000439128 UGT1A7Q9HAW7 530 aa11.97□□□□□ -0.49
NEK1-201ENST00000439128 UGT1A10Q9HAW8 530 aa11.97□□□□□ -0.49
NEK1-201ENST00000439128 UGT1A8Q9HAW9 530 aa11.97□□□□□ -0.49
NEK1-201ENST00000439128 ADAMTSL3P82987 1691 aa11.97□□□□□ -0.49
NEK1-201ENST00000439128 MYL12BO14950 172 aa11.97□□□□□ -0.49
NEK1-201ENST00000439128 COCHO43405 550 aa11.97□□□□□ -0.49
NEK1-201ENST00000439128 KERAO60938 352 aa11.97□□□□□ -0.49
NEK1-201ENST00000439128 C8GP07360 202 aa11.97□□□□□ -0.49
NEK1-201ENST00000439128 SLC6A2P23975 617 aa11.97□□□□□ -0.49
NEK1-201ENST00000439128 WDR5P61964 334 aaKnown RBP11.97□□□□□ -0.49
NEK1-201ENST00000439128 PLEKHG4Q58EX7 1191 aa11.97□□□□□ -0.49
NEK1-201ENST00000439128 FBXO48Q5FWF7 155 aa11.97□□□□□ -0.49
NEK1-201ENST00000439128 TCHHL1Q5QJ38 904 aaPredicted RBP11.97□□□□□ -0.49
NEK1-201ENST00000439128 TSTD2Q5T7W7 516 aa11.97□□□□□ -0.49
NEK1-201ENST00000439128 ZBTB49Q6ZSB9 765 aa11.97□□□□□ -0.49
NEK1-201ENST00000439128 SPATA9Q9BWV2 254 aa11.97□□□□□ -0.49
NEK1-201ENST00000439128 RHOJQ9H4E5 214 aa11.97□□□□□ -0.49
NEK1-201ENST00000439128 TMEM27Q9HBJ8 222 aa11.97□□□□□ -0.49
NEK1-201ENST00000439128 CRTAC1Q9NQ79 661 aa11.97□□□□□ -0.49
NEK1-201ENST00000439128 NECTIN3Q9NQS3 549 aa11.97□□□□□ -0.49
NEK1-201ENST00000439128 EPCAMP16422 314 aa11.97□□□□□ -0.49
NEK1-201ENST00000439128 HSPA13P48723 471 aa11.97□□□□□ -0.49
NEK1-201ENST00000439128 PER3P56645 1201 aa11.97□□□□□ -0.49
NEK1-201ENST00000439128 MPP1Q00013 466 aa11.97□□□□□ -0.49
NEK1-201ENST00000439128 KLC1Q07866 573 aa11.97□□□□□ -0.49
NEK1-201ENST00000439128 C1orf61Q13536 156 aa11.97□□□□□ -0.49
NEK1-201ENST00000439128 VPS26BQ4G0F5 336 aa11.97□□□□□ -0.49
NEK1-201ENST00000439128 CST9Q5W186 159 aa11.97□□□□□ -0.49
NEK1-201ENST00000439128 NAPRTQ6XQN6 538 aa11.97□□□□□ -0.49
NEK1-201ENST00000439128 TMC8Q8IU68 726 aa11.97□□□□□ -0.49
NEK1-201ENST00000439128 DNAJB14Q8TBM8 379 aa11.97□□□□□ -0.49
NEK1-201ENST00000439128 RHBDD1Q8TEB9 315 aa11.97□□□□□ -0.49
NEK1-201ENST00000439128 FOXJ1Q92949 421 aa11.97□□□□□ -0.49
NEK1-201ENST00000439128 GRIP2Q9C0E4 1043 aa11.97□□□□□ -0.49
NEK1-201ENST00000439128 RPS6KA6Q9UK32 745 aa11.97□□□□□ -0.49
NEK1-201ENST00000439128 HS3ST4Q9Y661 456 aa11.97□□□□□ -0.49
NEK1-201ENST00000439128 ATP6AP2A0A1C7CYW4 349 aa11.97□□□□□ -0.49
NEK1-201ENST00000439128 PEX1O43933 1283 aa11.97□□□□□ -0.49
NEK1-201ENST00000439128 ATP6AP2O75787 350 aa11.97□□□□□ -0.49
NEK1-201ENST00000439128 GSTM5P46439 218 aa11.97□□□□□ -0.49
NEK1-201ENST00000439128 DRG2P55039 364 aaKnown RBP11.97□□□□□ -0.49
NEK1-201ENST00000439128 KDM7AQ6ZMT4 941 aa11.97□□□□□ -0.49
NEK1-201ENST00000439128 STK32CQ86UX6 486 aa11.97□□□□□ -0.49
NEK1-201ENST00000439128 VANGL1Q8TAA9 524 aaPredicted RBP11.97□□□□□ -0.49
NEK1-201ENST00000439128 RACGAP1Q9H0H5 632 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms