RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 WNT9BO14905 357 aa2.87□□□□□ -1.95
HMGB1P18-201ENST00000438801 EDIL3O43854 480 aa2.87□□□□□ -1.95
HMGB1P18-201ENST00000438801 TNNT1P13805 278 aa2.87□□□□□ -1.95
HMGB1P18-201ENST00000438801 CD72P21854 359 aa2.87□□□□□ -1.95
HMGB1P18-201ENST00000438801 CDKN1AP38936 164 aa2.87□□□□□ -1.95
HMGB1P18-201ENST00000438801 CRKLP46109 303 aaKnown RBP2.87□□□□□ -1.95
HMGB1P18-201ENST00000438801 CLCN3P51790 818 aa2.87□□□□□ -1.95
HMGB1P18-201ENST00000438801 FUT6P51993 359 aa2.87□□□□□ -1.95
HMGB1P18-201ENST00000438801 PRKAA2P54646 552 aa2.87□□□□□ -1.95
HMGB1P18-201ENST00000438801 ERVK11-1P61568 191 aa2.87□□□□□ -1.95
HMGB1P18-201ENST00000438801 GOLGA8FQ08AF8 430 aa2.87□□□□□ -1.95
HMGB1P18-201ENST00000438801 OASLQ15646 514 aaKnown RBP2.87□□□□□ -1.95
HMGB1P18-201ENST00000438801 FAM72AQ5TYM5 149 aa2.87□□□□□ -1.95
HMGB1P18-201ENST00000438801 PLA2G4FQ68DD2 849 aa2.87□□□□□ -1.95
HMGB1P18-201ENST00000438801 FAM72DQ6L9T8 149 aa2.87□□□□□ -1.95
HMGB1P18-201ENST00000438801 SLC26A9Q7LBE3 791 aa2.87□□□□□ -1.95
HMGB1P18-201ENST00000438801 SATL1Q86VE3 508 aa2.87□□□□□ -1.95
HMGB1P18-201ENST00000438801 FAM72BQ86X60 149 aa2.87□□□□□ -1.95
HMGB1P18-201ENST00000438801 CIARTQ8N365 385 aaPredicted RBP2.87□□□□□ -1.95
HMGB1P18-201ENST00000438801 LINS1Q8NG48 757 aa2.87□□□□□ -1.95
HMGB1P18-201ENST00000438801 OR13A1Q8NGR1 328 aa2.87□□□□□ -1.95
HMGB1P18-201ENST00000438801 CSGALNACT1Q8TDX6 532 aa2.87□□□□□ -1.95
HMGB1P18-201ENST00000438801 TMEM170AQ8WVE7 144 aa2.87□□□□□ -1.95
HMGB1P18-201ENST00000438801 OTULINQ96BN8 352 aa2.87□□□□□ -1.95
HMGB1P18-201ENST00000438801 OPTNQ96CV9 577 aa2.87□□□□□ -1.95
HMGB1P18-201ENST00000438801 PABPC5Q96DU9 382 aaKnown RBP2.87□□□□□ -1.95
HMGB1P18-201ENST00000438801 RPGRIP1Q96KN7 1286 aa2.87□□□□□ -1.95
HMGB1P18-201ENST00000438801 PRAM1Q96QH2 718 aa2.87□□□□□ -1.95
HMGB1P18-201ENST00000438801 TRMT61BQ9BVS5 477 aaKnown RBP2.87□□□□□ -1.95
HMGB1P18-201ENST00000438801 EGLN1Q9GZT9 426 aa2.87□□□□□ -1.95
HMGB1P18-201ENST00000438801 TTC12Q9H892 705 aaPredicted RBP2.87□□□□□ -1.95
HMGB1P18-201ENST00000438801 LRRC4Q9HBW1 653 aa2.87□□□□□ -1.95
HMGB1P18-201ENST00000438801 ZNF334Q9HCZ1 680 aaPredicted RBP2.87□□□□□ -1.95
HMGB1P18-201ENST00000438801 TMOD3Q9NYL9 352 aa2.87□□□□□ -1.95
HMGB1P18-201ENST00000438801 NDRG3Q9UGV2 375 aa2.87□□□□□ -1.95
HMGB1P18-201ENST00000438801 ADAMTS9Q9P2N4 1935 aa2.87□□□□□ -1.95
HMGB1P18-201ENST00000438801 KDRP35968 1356 aa2.87□□□□□ -1.95
HMGB1P18-201ENST00000438801 HIVEP2P31629 2446 aa2.86□□□□□ -1.95
HMGB1P18-201ENST00000438801 TYW5A2RUC4 315 aaKnown RBP2.86□□□□□ -1.95
HMGB1P18-201ENST00000438801 PSMD14O00487 310 aa2.86□□□□□ -1.95
HMGB1P18-201ENST00000438801 EBAG9O00559 213 aa2.86□□□□□ -1.95
HMGB1P18-201ENST00000438801 MID1O15344 667 aa2.86□□□□□ -1.95
HMGB1P18-201ENST00000438801 ZIC3O60481 467 aa2.86□□□□□ -1.95
HMGB1P18-201ENST00000438801 RGS11O94810 467 aa2.86□□□□□ -1.95
HMGB1P18-201ENST00000438801 AMBPP02760 352 aa2.86□□□□□ -1.95
HMGB1P18-201ENST00000438801 HNRNPA1P09651 372 aaKnown RBP eCLIP2.86□□□□□ -1.95
HMGB1P18-201ENST00000438801 SETSIPP0DME0 302 aa2.86□□□□□ -1.95
HMGB1P18-201ENST00000438801 SRCP12931 536 aa2.86□□□□□ -1.95
HMGB1P18-201ENST00000438801 MARK3P27448 753 aa2.86□□□□□ -1.95
HMGB1P18-201ENST00000438801 CST5P28325 142 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P18-201ENST00000438801 HNF1BP35680 557 aa2.86□□□□□ -1.95
HMGB1P18-201ENST00000438801 TLE2Q04725 743 aa2.86□□□□□ -1.95
HMGB1P18-201ENST00000438801 FCN2Q15485 313 aa2.86□□□□□ -1.95
HMGB1P18-201ENST00000438801 AMZ1Q400G9 498 aa2.86□□□□□ -1.95
HMGB1P18-201ENST00000438801 ATP13A5Q4VNC0 1218 aa2.86□□□□□ -1.95
HMGB1P18-201ENST00000438801 NAPEPLDQ6IQ20 393 aa2.86□□□□□ -1.95
HMGB1P18-201ENST00000438801 FAM122CQ6P4D5 195 aa2.86□□□□□ -1.95
HMGB1P18-201ENST00000438801 CHD1LQ86WJ1 897 aa2.86□□□□□ -1.95
HMGB1P18-201ENST00000438801 EPHX4Q8IUS5 362 aa2.86□□□□□ -1.95
HMGB1P18-201ENST00000438801 KCNH5Q8NCM2 988 aa2.86□□□□□ -1.95
HMGB1P18-201ENST00000438801 HSPH1Q92598 858 aa2.86□□□□□ -1.95
HMGB1P18-201ENST00000438801 RNFT2Q96EX2 444 aa2.86□□□□□ -1.95
HMGB1P18-201ENST00000438801 TMEM19Q96HH6 336 aa2.86□□□□□ -1.95
HMGB1P18-201ENST00000438801 RBM17Q96I25 401 aaKnown RBP2.86□□□□□ -1.95
HMGB1P18-201ENST00000438801 TTC14Q96N46 770 aa2.86□□□□□ -1.95
HMGB1P18-201ENST00000438801 RTP3Q9BQQ7 232 aa2.86□□□□□ -1.95
HMGB1P18-201ENST00000438801 FBRSL1Q9HCM7 1045 aaKnown RBP2.86□□□□□ -1.95
HMGB1P18-201ENST00000438801 CYSLTR2Q9NS75 346 aa2.86□□□□□ -1.95
HMGB1P18-201ENST00000438801 NARFQ9UHQ1 456 aa2.86□□□□□ -1.95
HMGB1P18-201ENST00000438801 CD207Q9UJ71 328 aa2.86□□□□□ -1.95
HMGB1P18-201ENST00000438801 KCNS2Q9ULS6 477 aa2.86□□□□□ -1.95
HMGB1P18-201ENST00000438801 PCDH11XQ9BZA7 1347 aa2.86□□□□□ -1.95
HMGB1P18-201ENST00000438801 TONSLQ96HA7 1378 aa2.86□□□□□ -1.95
HMGB1P18-201ENST00000438801 CUBNO60494 3623 aa2.85□□□□□ -1.95
HMGB1P18-201ENST00000438801 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP2.85□□□□□ -1.95
HMGB1P18-201ENST00000438801 TCERG1O14776 1098 aaKnown RBP2.85□□□□□ -1.95
HMGB1P18-201ENST00000438801 PRC1O43663 620 aa2.85□□□□□ -1.95
HMGB1P18-201ENST00000438801 SHOX2O60902 331 aaPredicted RBP2.85□□□□□ -1.95
HMGB1P18-201ENST00000438801 ATP2C2O75185 946 aa2.85□□□□□ -1.95
HMGB1P18-201ENST00000438801 NDUFS7O75251 213 aa2.85□□□□□ -1.95
HMGB1P18-201ENST00000438801 RFPL2O75678 378 aa2.85□□□□□ -1.95
HMGB1P18-201ENST00000438801 NADKO95544 446 aaPredicted RBP2.85□□□□□ -1.95
HMGB1P18-201ENST00000438801 CSTBP04080 98 aaKnown RBP2.85□□□□□ -1.95
HMGB1P18-201ENST00000438801 IFIT2P09913 472 aaKnown RBP2.85□□□□□ -1.95
HMGB1P18-201ENST00000438801 SRD5A1P18405 259 aa2.85□□□□□ -1.95
HMGB1P18-201ENST00000438801 RPS12P25398 132 aaKnown RBP2.85□□□□□ -1.95
HMGB1P18-201ENST00000438801 SERPINB3P29508 390 aa2.85□□□□□ -1.95
HMGB1P18-201ENST00000438801 ALDH1B1P30837 517 aa2.85□□□□□ -1.95
HMGB1P18-201ENST00000438801 TIMP3P35625 211 aa2.85□□□□□ -1.95
HMGB1P18-201ENST00000438801 LIMK1P53667 647 aa2.85□□□□□ -1.95
HMGB1P18-201ENST00000438801 FOXO1Q12778 655 aa2.85□□□□□ -1.95
HMGB1P18-201ENST00000438801 EFNB3Q15768 340 aa2.85□□□□□ -1.95
HMGB1P18-201ENST00000438801 SLC18A3Q16572 532 aa2.85□□□□□ -1.95
HMGB1P18-201ENST00000438801 LPAL2Q16609 132 aa2.85□□□□□ -1.95
HMGB1P18-201ENST00000438801 C14orf177Q52M58 125 aa2.85□□□□□ -1.95
HMGB1P18-201ENST00000438801 KRTAP5-4Q6L8H1 288 aa2.85□□□□□ -1.95
HMGB1P18-201ENST00000438801 CES5AQ6NT32 575 aa2.85□□□□□ -1.95
HMGB1P18-201ENST00000438801 IL20RBQ6UXL0 311 aa2.85□□□□□ -1.95
HMGB1P18-201ENST00000438801 PRSS45Q7RTY3 260 aa2.85□□□□□ -1.95
HMGB1P18-201ENST00000438801 SLC9B2Q86UD5 537 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms