RNA–Protein interactions for RNA: ENST00000438552.6

SNRPB-202, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SNRPB, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-202ENST00000438552 GPBAR1Q8TDU6 330 aa15.95■□□□□ 0.14
SNRPB-202ENST00000438552 CNDP2Q96KP4 475 aaKnown RBP15.95■□□□□ 0.14
SNRPB-202ENST00000438552 SIGLEC10Q96LC7 697 aa15.95■□□□□ 0.14
SNRPB-202ENST00000438552 TTC25Q96NG3 672 aa15.95■□□□□ 0.14
SNRPB-202ENST00000438552 LRRC1Q9BTT6 524 aa15.95■□□□□ 0.14
SNRPB-202ENST00000438552 BOCQ9BWV1 1114 aa15.95■□□□□ 0.14
SNRPB-202ENST00000438552 GSDMCQ9BYG8 508 aa15.95■□□□□ 0.14
SNRPB-202ENST00000438552 RAB17Q9H0T7 212 aa15.95■□□□□ 0.14
SNRPB-202ENST00000438552 GRHL1Q9NZI5 618 aa15.95■□□□□ 0.14
SNRPB-202ENST00000438552 SIRPGQ9P1W8 387 aa15.95■□□□□ 0.14
SNRPB-202ENST00000438552 KCNK6Q9Y257 313 aa15.95■□□□□ 0.14
SNRPB-202ENST00000438552 UTP11Q9Y3A2 253 aaKnown RBP15.95■□□□□ 0.14
SNRPB-202ENST00000438552 PIKFYVEQ9Y2I7 2098 aa15.95■□□□□ 0.14
SNRPB-202ENST00000438552 FAM237BA0A1B0GVD1 139 aa15.94■□□□□ 0.14
SNRPB-202ENST00000438552 SPAARA0A1B0GVQ0 90 aa15.94■□□□□ 0.14
SNRPB-202ENST00000438552 OR2AG2A6NM03 316 aa15.94■□□□□ 0.14
SNRPB-202ENST00000438552 B4DGG1 531 aa15.94■□□□□ 0.14
SNRPB-202ENST00000438552 GPR89AB7ZAQ6 455 aa15.94■□□□□ 0.14
SNRPB-202ENST00000438552 SMAPO00193 183 aa15.94■□□□□ 0.14
SNRPB-202ENST00000438552 LDOC1O95751 146 aaPredicted RBP15.94■□□□□ 0.14
SNRPB-202ENST00000438552 GPR89BP0CG08 455 aa15.94■□□□□ 0.14
SNRPB-202ENST00000438552 MYF5P13349 255 aa15.94■□□□□ 0.14
SNRPB-202ENST00000438552 ARNTP27540 789 aa15.94■□□□□ 0.14
SNRPB-202ENST00000438552 ACTR1BP42025 376 aa15.94■□□□□ 0.14
SNRPB-202ENST00000438552 CTSCP53634 463 aa15.94■□□□□ 0.14
SNRPB-202ENST00000438552 ACTR1AP61163 376 aa15.94■□□□□ 0.14
SNRPB-202ENST00000438552 CALCOCO2Q13137 446 aa15.94■□□□□ 0.14
SNRPB-202ENST00000438552 SEMA3AQ14563 771 aa15.94■□□□□ 0.14
SNRPB-202ENST00000438552 PUM1Q14671 1186 aaKnown RBP eCLIP15.94■□□□□ 0.144e-12■■□□□ 13.2
SNRPB-202ENST00000438552 HIF1AQ16665 826 aa15.94■□□□□ 0.14
SNRPB-202ENST00000438552 DNAJC21Q5F1R6 531 aaKnown RBP15.94■□□□□ 0.14
SNRPB-202ENST00000438552 LRRTM4Q86VH4 590 aa15.94■□□□□ 0.14
SNRPB-202ENST00000438552 ZNF547Q8IVP9 402 aa15.94■□□□□ 0.14
SNRPB-202ENST00000438552 MMGT1Q8N4V1 131 aa15.94■□□□□ 0.14
SNRPB-202ENST00000438552 OR4L1Q8NH43 312 aa15.94■□□□□ 0.14
SNRPB-202ENST00000438552 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.94■□□□□ 0.148e-7■□□□□ 11.3
SNRPB-202ENST00000438552 STAMBPL1Q96FJ0 436 aa15.94■□□□□ 0.14
SNRPB-202ENST00000438552 COPS8Q99627 209 aa15.94■□□□□ 0.14
SNRPB-202ENST00000438552 CARD6Q9BX69 1037 aa15.94■□□□□ 0.14
SNRPB-202ENST00000438552 CATSPERZQ9NTU4 200 aa15.94■□□□□ 0.14
SNRPB-202ENST00000438552 ZDHHC3Q9NYG2 299 aa15.94■□□□□ 0.14
SNRPB-202ENST00000438552 IL1RAPL1Q9NZN1 696 aa15.94■□□□□ 0.14
SNRPB-202ENST00000438552 WHRNQ9P202 907 aa15.94■□□□□ 0.14
SNRPB-202ENST00000438552 MARCH4Q9P2E8 410 aaPredicted RBP15.94■□□□□ 0.14
SNRPB-202ENST00000438552 GPR34Q9UPC5 381 aa15.94■□□□□ 0.14
SNRPB-202ENST00000438552 IGLV3-16A0A075B6K0 115 aa15.93■□□□□ 0.14
SNRPB-202ENST00000438552 ESYT3A0FGR9 886 aa15.93■□□□□ 0.14
SNRPB-202ENST00000438552 TPP1O14773 563 aa15.93■□□□□ 0.14
SNRPB-202ENST00000438552 KMOO15229 486 aa15.93■□□□□ 0.14
SNRPB-202ENST00000438552 KCNK5O95279 499 aa15.93■□□□□ 0.14
SNRPB-202ENST00000438552 VAPBO95292 243 aa15.93■□□□□ 0.14
SNRPB-202ENST00000438552 PBLDP30039 288 aaPredicted RBP15.93■□□□□ 0.14
SNRPB-202ENST00000438552 ARL4CP56559 192 aa15.93■□□□□ 0.14
SNRPB-202ENST00000438552 TRADDQ15628 312 aa15.93■□□□□ 0.14
SNRPB-202ENST00000438552 INSCQ1MX18 579 aa15.93■□□□□ 0.14
SNRPB-202ENST00000438552 PROX2Q3B8N5 592 aa15.93■□□□□ 0.14
SNRPB-202ENST00000438552 ANKRD20A4Q4UJ75 823 aa15.93■□□□□ 0.14
SNRPB-202ENST00000438552 FASTKD1Q53R41 847 aaKnown RBP15.93■□□□□ 0.14
SNRPB-202ENST00000438552 HP1BP3Q5SSJ5 553 aaPredicted RBP15.93■□□□□ 0.14
SNRPB-202ENST00000438552 C6orf132Q5T0Z8 1188 aa15.93■□□□□ 0.14
SNRPB-202ENST00000438552 ARMC3Q5W041 872 aa15.93■□□□□ 0.14
SNRPB-202ENST00000438552 KIAA0930Q6ICG6 404 aaPredicted RBP15.93■□□□□ 0.14
SNRPB-202ENST00000438552 ZCCHC8Q6NZY4 707 aaKnown RBP15.93■□□□□ 0.14
SNRPB-202ENST00000438552 SFTPA2Q8IWL1 248 aa15.93■□□□□ 0.14
SNRPB-202ENST00000438552 SLC35F3Q8IY50 421 aa15.93■□□□□ 0.14
SNRPB-202ENST00000438552 PDIK1LQ8N165 341 aa15.93■□□□□ 0.14
SNRPB-202ENST00000438552 OTUD6BQ8N6M0 293 aa15.93■□□□□ 0.14
SNRPB-202ENST00000438552 CEP112Q8N8E3 955 aa15.93■□□□□ 0.14
SNRPB-202ENST00000438552 KYQ8NBH2 561 aa15.93■□□□□ 0.14
SNRPB-202ENST00000438552 BBOF1Q8ND07 529 aa15.93■□□□□ 0.14
SNRPB-202ENST00000438552 FAM46DQ8NEK8 389 aa15.93■□□□□ 0.14
SNRPB-202ENST00000438552 DCUN1D1Q96GG9 259 aa15.93■□□□□ 0.14
SNRPB-202ENST00000438552 APOLD1Q96LR9 279 aa15.93■□□□□ 0.14
SNRPB-202ENST00000438552 FCRL3Q96P31 734 aaPredicted RBP15.93■□□□□ 0.14
SNRPB-202ENST00000438552 CDC6Q99741 560 aa15.93■□□□□ 0.14
SNRPB-202ENST00000438552 WDR83Q9BRX9 315 aaKnown RBP15.93■□□□□ 0.14
SNRPB-202ENST00000438552 DUSP23Q9BVJ7 150 aa15.93■□□□□ 0.14
SNRPB-202ENST00000438552 TAAR2Q9P1P5 351 aa15.93■□□□□ 0.14
SNRPB-202ENST00000438552 SLC23A2Q9UGH3 650 aa15.93■□□□□ 0.14
SNRPB-202ENST00000438552 CHMP2BQ9UQN3 213 aa15.93■□□□□ 0.14
SNRPB-202ENST00000438552 RPS6KL1Q9Y6S9 549 aa15.93■□□□□ 0.14
SNRPB-202ENST00000438552 LY6G6EA0A0G2JKS1 128 aa15.92■□□□□ 0.14
SNRPB-202ENST00000438552 CFAP99D6REC4 459 aa15.92■□□□□ 0.14
SNRPB-202ENST00000438552 GOLGA8KD6RF30 607 aa15.92■□□□□ 0.14
SNRPB-202ENST00000438552 GOLGA8TH3BQL2 631 aa15.92■□□□□ 0.14
SNRPB-202ENST00000438552 NDC80O14777 642 aa15.92■□□□□ 0.14
SNRPB-202ENST00000438552 SGTAO43765 313 aa15.92■□□□□ 0.14
SNRPB-202ENST00000438552 RALBP11234 206 aa15.92■□□□□ 0.14
SNRPB-202ENST00000438552 CEACAM1P13688 526 aa15.92■□□□□ 0.14
SNRPB-202ENST00000438552 ZNF7P17097 686 aaPredicted RBP15.92■□□□□ 0.14
SNRPB-202ENST00000438552 PGAM1P18669 254 aa15.92■□□□□ 0.14
SNRPB-202ENST00000438552 DNAJC3Q13217 504 aa15.92■□□□□ 0.14
SNRPB-202ENST00000438552 LRP8Q14114 963 aa15.92■□□□□ 0.14
SNRPB-202ENST00000438552 TRIP6Q15654 476 aaKnown RBP15.92■□□□□ 0.14
SNRPB-202ENST00000438552 LVRNQ6Q4G3 990 aa15.92■□□□□ 0.14
SNRPB-202ENST00000438552 TMEM220Q6QAJ8 160 aa15.92■□□□□ 0.14
SNRPB-202ENST00000438552 C11orf96Q7Z7L8 435 aa15.92■□□□□ 0.14
SNRPB-202ENST00000438552 LDB1Q86U70 411 aaPredicted RBP15.92■□□□□ 0.14
SNRPB-202ENST00000438552 TMEM135Q86UB9 458 aa15.92■□□□□ 0.14
SNRPB-202ENST00000438552 IGDCC3Q8IVU1 814 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms