RNA–Protein interactions for RNA: ENST00000437036.6

SKA2-202, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2 BASIC

Gene SKA2, Length 625 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-202ENST00000437036 KMOO15229 486 aa14.54□□□□□ -0.08
SKA2-202ENST00000437036 GRID2O43424 1007 aa14.54□□□□□ -0.08
SKA2-202ENST00000437036 GFRA3O60609 400 aa14.54□□□□□ -0.08
SKA2-202ENST00000437036 AP2A2O94973 939 aa14.54□□□□□ -0.08
SKA2-202ENST00000437036 ERVK-10P10266 1014 aa14.54□□□□□ -0.08
SKA2-202ENST00000437036 ATP1B2P14415 290 aaPredicted RBP14.54□□□□□ -0.08
SKA2-202ENST00000437036 ZNF8P17098 575 aaPredicted RBP14.54□□□□□ -0.08
SKA2-202ENST00000437036 SSTR1P30872 391 aa14.54□□□□□ -0.08
SKA2-202ENST00000437036 STX2P32856 288 aa14.54□□□□□ -0.08
SKA2-202ENST00000437036 SMAD1Q15797 465 aaKnown RBP14.54□□□□□ -0.08
SKA2-202ENST00000437036 PRAMEF14Q5SWL7 426 aa14.54□□□□□ -0.08
SKA2-202ENST00000437036 WDR93Q6P2C0 686 aa14.54□□□□□ -0.08
SKA2-202ENST00000437036 ZNF449Q6P9G9 518 aa14.54□□□□□ -0.08
SKA2-202ENST00000437036 PACS1Q6VY07 963 aa14.54□□□□□ -0.08
SKA2-202ENST00000437036 PRR23CQ6ZRP0 262 aa14.54□□□□□ -0.08
SKA2-202ENST00000437036 CAPN12Q6ZSI9 719 aa14.54□□□□□ -0.08
SKA2-202ENST00000437036 CYS1Q717R9 158 aa14.54□□□□□ -0.08
SKA2-202ENST00000437036 LRRTM4Q86VH4 590 aa14.54□□□□□ -0.08
SKA2-202ENST00000437036 LRRC6Q86X45 466 aa14.54□□□□□ -0.08
SKA2-202ENST00000437036 CILP2Q8IUL8 1156 aa14.54□□□□□ -0.08
SKA2-202ENST00000437036 TRAPPC5Q8IUR0 188 aa14.54□□□□□ -0.08
SKA2-202ENST00000437036 FSTL5Q8N475 847 aaPredicted RBP14.54□□□□□ -0.08
SKA2-202ENST00000437036 MINDY1Q8N5J2 469 aa14.54□□□□□ -0.08
SKA2-202ENST00000437036 PDXPQ96GD0 296 aa14.54□□□□□ -0.08
SKA2-202ENST00000437036 EDEM2Q9BV94 578 aa14.54□□□□□ -0.08
SKA2-202ENST00000437036 CLPBQ9H078 707 aa14.54□□□□□ -0.08
SKA2-202ENST00000437036 PARD6AQ9NPB6 346 aa14.54□□□□□ -0.08
SKA2-202ENST00000437036 MRPL40Q9NQ50 206 aaKnown RBP14.54□□□□□ -0.08
SKA2-202ENST00000437036 IARS2Q9NSE4 1012 aaKnown RBP14.54□□□□□ -0.08
SKA2-202ENST00000437036 INTS10Q9NVR2 710 aaKnown RBP14.54□□□□□ -0.08
SKA2-202ENST00000437036 TRNAU1APQ9NX07 287 aaKnown RBP14.54□□□□□ -0.08
SKA2-202ENST00000437036 NSMCE4AQ9NXX6 385 aa14.54□□□□□ -0.08
SKA2-202ENST00000437036 IL1RAPL1Q9NZN1 696 aa14.54□□□□□ -0.08
SKA2-202ENST00000437036 ZFATQ9P243 1243 aa14.54□□□□□ -0.08
SKA2-202ENST00000437036 MARCH4Q9P2E8 410 aaPredicted RBP14.54□□□□□ -0.08
SKA2-202ENST00000437036 GPR34Q9UPC5 381 aa14.54□□□□□ -0.08
SKA2-202ENST00000437036 CACNA1EQ15878 2313 aa14.54□□□□□ -0.08
SKA2-202ENST00000437036 NEMP2A6NFY4 417 aa14.53□□□□□ -0.08
SKA2-202ENST00000437036 OR56A5P0C7T3 313 aa14.53□□□□□ -0.08
SKA2-202ENST00000437036 ZNF883P0CG24 379 aa14.53□□□□□ -0.08
SKA2-202ENST00000437036 VCLP18206 1134 aa14.53□□□□□ -0.08
SKA2-202ENST00000437036 CA5AP35218 305 aa14.53□□□□□ -0.08
SKA2-202ENST00000437036 ILF3Q12906 894 aaKnown RBP eCLIP14.53□□□□□ -0.082e-15■■■■□ 22.5
SKA2-202ENST00000437036 LRP8Q14114 963 aa14.53□□□□□ -0.08
SKA2-202ENST00000437036 SUZ12Q15022 739 aaKnown RBP14.53□□□□□ -0.08
SKA2-202ENST00000437036 ELOCQ15369 112 aa14.53□□□□□ -0.08
SKA2-202ENST00000437036 TYSND1Q2T9J0 566 aa14.53□□□□□ -0.08
SKA2-202ENST00000437036 KHDC1Q4VXA5 237 aaKnown RBP14.53□□□□□ -0.08
SKA2-202ENST00000437036 PYCR3Q53H96 274 aa14.53□□□□□ -0.08
SKA2-202ENST00000437036 PRRT3Q5FWE3 981 aa14.53□□□□□ -0.08
SKA2-202ENST00000437036 TMEM220Q6QAJ8 160 aa14.53□□□□□ -0.08
SKA2-202ENST00000437036 KIAA0408Q6ZU52 694 aa14.53□□□□□ -0.08
SKA2-202ENST00000437036 TRMT10CQ7L0Y3 403 aaKnown RBP14.53□□□□□ -0.08
SKA2-202ENST00000437036 DET1Q7L5Y6 550 aa14.53□□□□□ -0.08
SKA2-202ENST00000437036 LDB1Q86U70 411 aaPredicted RBP14.53□□□□□ -0.08
SKA2-202ENST00000437036 SDR16C5Q8N3Y7 309 aa14.53□□□□□ -0.08
SKA2-202ENST00000437036 RASGEF1AQ8N9B8 481 aa14.53□□□□□ -0.08
SKA2-202ENST00000437036 TSSK1BQ9BXA7 367 aa14.53□□□□□ -0.08
SKA2-202ENST00000437036 PLAC1Q9HBJ0 212 aa14.53□□□□□ -0.08
SKA2-202ENST00000437036 LRRC4CQ9HCJ2 640 aa14.53□□□□□ -0.08
SKA2-202ENST00000437036 TMEM9BQ9NQ34 198 aa14.53□□□□□ -0.08
SKA2-202ENST00000437036 MOCS1Q9NZB8 636 aa14.53□□□□□ -0.08
SKA2-202ENST00000437036 FBXO5Q9UKT4 447 aa14.53□□□□□ -0.08
SKA2-202ENST00000437036 DOLKQ9UPQ8 538 aa14.53□□□□□ -0.08
SKA2-202ENST00000437036 DNMT3AQ9Y6K1 912 aaPredicted RBP14.53□□□□□ -0.08
SKA2-202ENST00000437036 ZNF106Q9H2Y7 1883 aaKnown RBP14.52□□□□□ -0.08
SKA2-202ENST00000437036 OTOGLQ3ZCN5 2332 aa14.52□□□□□ -0.08
SKA2-202ENST00000437036 UBA6A0AVT1 1052 aaPredicted RBP14.52□□□□□ -0.09
SKA2-202ENST00000437036 KLHL33A6NCF5 533 aa14.52□□□□□ -0.09
SKA2-202ENST00000437036 PRMT5O14744 637 aaPredicted RBP14.52□□□□□ -0.09
SKA2-202ENST00000437036 CHUKO15111 745 aa14.52□□□□□ -0.09
SKA2-202ENST00000437036 KCNJ13O60928 360 aa14.52□□□□□ -0.09
SKA2-202ENST00000437036 DNAJC6O75061 913 aa14.52□□□□□ -0.09
SKA2-202ENST00000437036 PIAS2O75928 621 aa14.52□□□□□ -0.09
SKA2-202ENST00000437036 GSTM1P09488 218 aa14.52□□□□□ -0.09
SKA2-202ENST00000437036 TGM1P22735 817 aa14.52□□□□□ -0.09
SKA2-202ENST00000437036 SLC1A2P43004 574 aa14.52□□□□□ -0.09
SKA2-202ENST00000437036 VSNL1P62760 191 aa14.52□□□□□ -0.09
SKA2-202ENST00000437036 B4GALNT1Q00973 533 aa14.52□□□□□ -0.09
SKA2-202ENST00000437036 GSTM4Q03013 218 aa14.52□□□□□ -0.09
SKA2-202ENST00000437036 ILF2Q12905 390 aaKnown RBP14.52□□□□□ -0.09
SKA2-202ENST00000437036 SEMA3AQ14563 771 aa14.52□□□□□ -0.09
SKA2-202ENST00000437036 KYNUQ16719 465 aa14.52□□□□□ -0.09
SKA2-202ENST00000437036 INSCQ1MX18 579 aa14.52□□□□□ -0.09
SKA2-202ENST00000437036 INAVAQ3KP66 663 aa14.52□□□□□ -0.09
SKA2-202ENST00000437036 BCL7AQ4VC05 210 aa14.52□□□□□ -0.09
SKA2-202ENST00000437036 PTRHD1Q6GMV3 140 aaKnown RBP14.52□□□□□ -0.09
SKA2-202ENST00000437036 TRMT10BQ6PF06 316 aaKnown RBP14.52□□□□□ -0.09
SKA2-202ENST00000437036 CRTC3Q6UUV7 619 aa14.52□□□□□ -0.09
SKA2-202ENST00000437036 MICALCLQ6ZW33 695 aa14.52□□□□□ -0.09
SKA2-202ENST00000437036 GKN2Q86XP6 184 aa14.52□□□□□ -0.09
SKA2-202ENST00000437036 CNTN4Q8IWV2 1026 aa14.52□□□□□ -0.09
SKA2-202ENST00000437036 UNC5BQ8IZJ1 945 aa14.52□□□□□ -0.09
SKA2-202ENST00000437036 LMX1AQ8TE12 382 aa14.52□□□□□ -0.09
SKA2-202ENST00000437036 SGF29Q96ES7 293 aa14.52□□□□□ -0.09
SKA2-202ENST00000437036 BOCQ9BWV1 1114 aa14.52□□□□□ -0.09
SKA2-202ENST00000437036 GSDMCQ9BYG8 508 aa14.52□□□□□ -0.09
SKA2-202ENST00000437036 CCDC68Q9H2F9 335 aa14.52□□□□□ -0.09
SKA2-202ENST00000437036 CDC42EP4Q9H3Q1 356 aaKnown RBP14.52□□□□□ -0.09
SKA2-202ENST00000437036 TM7SF3Q9NS93 570 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms