RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 H0Y626 953 aa10.32□□□□□ -0.76
CD44-210ENST00000434472 FXYD1O00168 92 aa10.32□□□□□ -0.76
CD44-210ENST00000434472 PRMT5O14744 637 aaPredicted RBP10.32□□□□□ -0.76
CD44-210ENST00000434472 HTRA2O43464 458 aaPredicted RBP10.32□□□□□ -0.76
CD44-210ENST00000434472 FZD6O60353 706 aa10.32□□□□□ -0.76
CD44-210ENST00000434472 NIPSNAP2O75323 286 aa10.32□□□□□ -0.76
CD44-210ENST00000434472 CSPG5O95196 566 aa10.32□□□□□ -0.76
CD44-210ENST00000434472 PGM3O95394 542 aa10.32□□□□□ -0.76
CD44-210ENST00000434472 EFEMP2O95967 443 aa10.32□□□□□ -0.76
CD44-210ENST00000434472 KLKB1P03952 638 aa10.32□□□□□ -0.76
CD44-210ENST00000434472 IRF1P10914 325 aa10.32□□□□□ -0.76
CD44-210ENST00000434472 ZNF7P17097 686 aaPredicted RBP10.32□□□□□ -0.76
CD44-210ENST00000434472 SLC6A2P23975 617 aa10.32□□□□□ -0.76
CD44-210ENST00000434472 ALDH7A1P49419 539 aaKnown RBP10.32□□□□□ -0.76
CD44-210ENST00000434472 RGS4P49798 205 aa10.32□□□□□ -0.76
CD44-210ENST00000434472 POLR2JP52435 117 aaKnown RBP10.32□□□□□ -0.76
CD44-210ENST00000434472 ARF5P84085 180 aa10.32□□□□□ -0.76
CD44-210ENST00000434472 PRKCQQ04759 706 aa10.32□□□□□ -0.76
CD44-210ENST00000434472 NOGQ13253 232 aa10.32□□□□□ -0.76
CD44-210ENST00000434472 RCAN2Q14206 197 aa10.32□□□□□ -0.76
CD44-210ENST00000434472 GPNMBQ14956 572 aa10.32□□□□□ -0.76
CD44-210ENST00000434472 SLC5A9Q2M3M2 681 aa10.32□□□□□ -0.76
CD44-210ENST00000434472 KRT80Q6KB66 452 aa10.32□□□□□ -0.76
CD44-210ENST00000434472 KIAA1841Q6NSI8 718 aa10.32□□□□□ -0.76
CD44-210ENST00000434472 IYDQ6PHW0 289 aa10.32□□□□□ -0.76
CD44-210ENST00000434472 FRA10AC1Q70Z53 315 aa10.32□□□□□ -0.76
CD44-210ENST00000434472 C16orf59Q7L2K0 433 aa10.32□□□□□ -0.76
CD44-210ENST00000434472 AMIGO2Q86SJ2 522 aa10.32□□□□□ -0.76
CD44-210ENST00000434472 CARM1Q86X55 608 aa10.32□□□□□ -0.76
CD44-210ENST00000434472 PROSER1Q86XN7 944 aa10.32□□□□□ -0.76
CD44-210ENST00000434472 PTRH1Q86Y79 214 aaKnown RBP10.32□□□□□ -0.76
CD44-210ENST00000434472 PIANPQ8IYJ0 282 aa10.32□□□□□ -0.76
CD44-210ENST00000434472 CRIPAKQ8N1N5 446 aa10.32□□□□□ -0.76
CD44-210ENST00000434472 CARNMT1Q8N4J0 409 aa10.32□□□□□ -0.76
CD44-210ENST00000434472 TMEM199Q8N511 208 aa10.32□□□□□ -0.76
CD44-210ENST00000434472 HM13Q8TCT9 377 aa10.32□□□□□ -0.76
CD44-210ENST00000434472 BCL7CQ8WUZ0 217 aaPredicted RBP10.32□□□□□ -0.76
CD44-210ENST00000434472 EEF1AKMT1Q8WVE0 214 aa10.32□□□□□ -0.76
CD44-210ENST00000434472 CANT1Q8WVQ1 401 aa10.32□□□□□ -0.76
CD44-210ENST00000434472 TMEM125Q96AQ2 219 aa10.32□□□□□ -0.76
CD44-210ENST00000434472 PRPF18Q99633 342 aaKnown RBP10.32□□□□□ -0.76
CD44-210ENST00000434472 GPR63Q9BZJ6 419 aa10.32□□□□□ -0.76
CD44-210ENST00000434472 NOL11Q9H8H0 719 aaKnown RBP10.32□□□□□ -0.76
CD44-210ENST00000434472 IL17CQ9P0M4 197 aa10.32□□□□□ -0.76
CD44-210ENST00000434472 GIMAP2Q9UG22 337 aa10.32□□□□□ -0.76
CD44-210ENST00000434472 TIMM22Q9Y584 194 aa10.32□□□□□ -0.76
CD44-210ENST00000434472 PTGDR2Q9Y5Y4 395 aa10.32□□□□□ -0.76
CD44-210ENST00000434472 C7orf72A4D263 438 aa10.31□□□□□ -0.76
CD44-210ENST00000434472 NCF1BA6NI72 391 aaPredicted RBP10.31□□□□□ -0.76
CD44-210ENST00000434472 NCF1CA8MVU1 366 aaPredicted RBP10.31□□□□□ -0.76
CD44-210ENST00000434472 E2F3O00716 465 aa10.31□□□□□ -0.76
CD44-210ENST00000434472 ARPC2O15144 300 aa10.31□□□□□ -0.76
CD44-210ENST00000434472 RAD51BO15315 384 aa10.31□□□□□ -0.76
CD44-210ENST00000434472 ADAM12O43184 909 aa10.31□□□□□ -0.76
CD44-210ENST00000434472 SYNCRIPO60506 623 aaKnown RBP10.31□□□□□ -0.76
CD44-210ENST00000434472 TBL1XO60907 577 aa10.31□□□□□ -0.76
CD44-210ENST00000434472 TIPRLO75663 272 aa10.31□□□□□ -0.76
CD44-210ENST00000434472 ABLIM3O94929 683 aa10.31□□□□□ -0.76
CD44-210ENST00000434472 OR4F21O95013 312 aa10.31□□□□□ -0.76
CD44-210ENST00000434472 PARNO95453 639 aaKnown RBP10.31□□□□□ -0.76
CD44-210ENST00000434472 C1RP00736 705 aa10.31□□□□□ -0.76
CD44-210ENST00000434472 NCF1P14598 390 aaPredicted RBP10.31□□□□□ -0.76
CD44-210ENST00000434472 MSH3P20585 1137 aa10.31□□□□□ -0.76
CD44-210ENST00000434472 HTR1EP28566 365 aa10.31□□□□□ -0.76
CD44-210ENST00000434472 MAPK8P45983 427 aa10.31□□□□□ -0.76
CD44-210ENST00000434472 CDKN1CP49918 316 aaPredicted RBP10.31□□□□□ -0.76
CD44-210ENST00000434472 SGSHP51688 502 aa10.31□□□□□ -0.76
CD44-210ENST00000434472 HK3P52790 923 aa10.31□□□□□ -0.76
CD44-210ENST00000434472 TUBA4AP68366 448 aa10.31□□□□□ -0.76
CD44-210ENST00000434472 CAP1Q01518 475 aa10.31□□□□□ -0.76
CD44-210ENST00000434472 NRF1Q16656 503 aa10.31□□□□□ -0.76
CD44-210ENST00000434472 SMU1Q2TAY7 513 aa10.31□□□□□ -0.76
CD44-210ENST00000434472 EML3Q32P44 896 aa10.31□□□□□ -0.76
CD44-210ENST00000434472 ATP6AP1LQ52LC2 224 aa10.31□□□□□ -0.76
CD44-210ENST00000434472 ARMC12Q5T9G4 340 aa10.31□□□□□ -0.76
CD44-210ENST00000434472 PTRHD1Q6GMV3 140 aaKnown RBP10.31□□□□□ -0.76
CD44-210ENST00000434472 B3GNT6Q6ZMB0 384 aa10.31□□□□□ -0.76
CD44-210ENST00000434472 RBM44Q6ZP01 1051 aaKnown RBP10.31□□□□□ -0.76
CD44-210ENST00000434472 CPNE9Q8IYJ1 553 aa10.31□□□□□ -0.76
CD44-210ENST00000434472 TRPV3Q8NET8 790 aa10.31□□□□□ -0.76
CD44-210ENST00000434472 ZNF461Q8TAF7 563 aa10.31□□□□□ -0.76
CD44-210ENST00000434472 DTNBP1Q96EV8 351 aa10.31□□□□□ -0.76
CD44-210ENST00000434472 CENPNQ96H22 339 aaPredicted RBP10.31□□□□□ -0.76
CD44-210ENST00000434472 MYO19Q96H55 970 aa10.31□□□□□ -0.76
CD44-210ENST00000434472 SLC30A3Q99726 388 aa10.31□□□□□ -0.76
CD44-210ENST00000434472 KCTD14Q9BQ13 255 aaPredicted RBP10.31□□□□□ -0.76
CD44-210ENST00000434472 SLC39A3Q9BRY0 314 aa10.31□□□□□ -0.76
CD44-210ENST00000434472 TMEM79Q9BSE2 394 aa10.31□□□□□ -0.76
CD44-210ENST00000434472 ZBED2Q9BTP6 218 aa10.31□□□□□ -0.76
CD44-210ENST00000434472 ANKRD60Q9BZ19 345 aa10.31□□□□□ -0.76
CD44-210ENST00000434472 HEBP1Q9NRV9 189 aa10.31□□□□□ -0.76
CD44-210ENST00000434472 GKN1Q9NS71 199 aa10.31□□□□□ -0.76
CD44-210ENST00000434472 GALPQ9UBC7 116 aa10.31□□□□□ -0.76
CD44-210ENST00000434472 EIF2B4Q9UI10 523 aaKnown RBP10.31□□□□□ -0.76
CD44-210ENST00000434472 GNPTGQ9UJJ9 305 aa10.31□□□□□ -0.76
CD44-210ENST00000434472 AURKCQ9UQB9 309 aa10.31□□□□□ -0.76
CD44-210ENST00000434472 MYRFQ9Y2G1 1151 aa10.31□□□□□ -0.76
CD44-210ENST00000434472 EME2A4GXA9 379 aaPredicted RBP10.3□□□□□ -0.76
CD44-210ENST00000434472 ARNTLO00327 626 aa10.3□□□□□ -0.76
CD44-210ENST00000434472 OR1I1O60431 355 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms