RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 PTP4A2Q12974 167 aa3.31□□□□□ -1.88
PTPN4-205ENST00000433888 PPFIA1Q13136 1202 aa3.31□□□□□ -1.88
PTPN4-205ENST00000433888 OLIG2Q13516 323 aa3.31□□□□□ -1.88
PTPN4-205ENST00000433888 GSTA3Q16772 222 aa3.31□□□□□ -1.88
PTPN4-205ENST00000433888 KRTAP13-3Q3SY46 172 aa3.31□□□□□ -1.88
PTPN4-205ENST00000433888 ZNF613Q6PF04 617 aa3.31□□□□□ -1.88
PTPN4-205ENST00000433888 BHLHB9Q6PI77 547 aa3.31□□□□□ -1.88
PTPN4-205ENST00000433888 LONP2Q86WA8 852 aa3.31□□□□□ -1.88
PTPN4-205ENST00000433888 PPHLN1Q8NEY8 458 aaKnown RBP3.31□□□□□ -1.88
PTPN4-205ENST00000433888 OR14L1PQ8NHC6 308 aa3.31□□□□□ -1.88
PTPN4-205ENST00000433888 PRMT6Q96LA8 375 aaPredicted RBP3.31□□□□□ -1.88
PTPN4-205ENST00000433888 KIF9Q9HAQ2 790 aa3.31□□□□□ -1.88
PTPN4-205ENST00000433888 APOBEC3GQ9HC16 384 aaKnown RBP3.31□□□□□ -1.88
PTPN4-205ENST00000433888 CCDC177Q9NQR7 707 aaPredicted RBP3.31□□□□□ -1.88
PTPN4-205ENST00000433888 INTS10Q9NVR2 710 aaKnown RBP3.31□□□□□ -1.88
PTPN4-205ENST00000433888 ABI3Q9P2A4 366 aa3.31□□□□□ -1.88
PTPN4-205ENST00000433888 OR14J1Q9UGF5 321 aa3.31□□□□□ -1.88
PTPN4-205ENST00000433888 HAO1Q9UJM8 370 aa3.31□□□□□ -1.88
PTPN4-205ENST00000433888 INTS6Q9UL03 887 aaKnown RBP3.31□□□□□ -1.88
PTPN4-205ENST00000433888 NOTCH2Q04721 2471 aa3.31□□□□□ -1.88
PTPN4-205ENST00000433888 STK36Q9NRP7 1315 aa3.3□□□□□ -1.88
PTPN4-205ENST00000433888 A0A1W2PNU3 283 aaPredicted RBP3.3□□□□□ -1.88
PTPN4-205ENST00000433888 BUD23O43709 281 aaKnown RBP3.3□□□□□ -1.88
PTPN4-205ENST00000433888 CREB3O43889 395 aa3.3□□□□□ -1.88
PTPN4-205ENST00000433888 TCEA3O75764 348 aa3.3□□□□□ -1.88
PTPN4-205ENST00000433888 EML2O95834 649 aa3.3□□□□□ -1.88
PTPN4-205ENST00000433888 CLPTM1O96005 669 aa3.3□□□□□ -1.88
PTPN4-205ENST00000433888 TPOP07202 933 aa3.3□□□□□ -1.88
PTPN4-205ENST00000433888 LIFP15018 202 aa3.3□□□□□ -1.88
PTPN4-205ENST00000433888 ZNF182P17025 639 aaPredicted RBP3.3□□□□□ -1.88
PTPN4-205ENST00000433888 RPP30P78346 268 aaKnown RBP3.3□□□□□ -1.88
PTPN4-205ENST00000433888 PPARDQ03181 441 aa3.3□□□□□ -1.88
PTPN4-205ENST00000433888 CTU2Q2VPK5 515 aaKnown RBP3.3□□□□□ -1.88
PTPN4-205ENST00000433888 SNAI3Q3KNW1 292 aa3.3□□□□□ -1.88
PTPN4-205ENST00000433888 PACS1Q6VY07 963 aa3.3□□□□□ -1.88
PTPN4-205ENST00000433888 SH2D5Q6ZV89 423 aa3.3□□□□□ -1.88
PTPN4-205ENST00000433888 LRRTM4Q86VH4 590 aa3.3□□□□□ -1.88
PTPN4-205ENST00000433888 SCML4Q8N228 414 aa3.3□□□□□ -1.88
PTPN4-205ENST00000433888 UTP15Q8TED0 518 aaKnown RBP3.3□□□□□ -1.88
PTPN4-205ENST00000433888 PSPC1Q8WXF1 523 aaKnown RBP3.3□□□□□ -1.88
PTPN4-205ENST00000433888 RRNAD1Q96FB5 475 aaKnown RBP3.3□□□□□ -1.88
PTPN4-205ENST00000433888 OXNAD1Q96HP4 312 aaPredicted RBP3.3□□□□□ -1.88
PTPN4-205ENST00000433888 MAELQ96JY0 434 aaKnown RBP3.3□□□□□ -1.88
PTPN4-205ENST00000433888 MAGIXQ9H6Y5 334 aa3.3□□□□□ -1.88
PTPN4-205ENST00000433888 PPCSQ9HAB8 311 aa3.3□□□□□ -1.88
PTPN4-205ENST00000433888 KLHL8Q9P2G9 620 aaPredicted RBP3.3□□□□□ -1.88
PTPN4-205ENST00000433888 GJD2Q9UKL4 321 aa3.3□□□□□ -1.88
PTPN4-205ENST00000433888 EXOGQ9Y2C4 368 aaKnown RBP3.3□□□□□ -1.88
PTPN4-205ENST00000433888 TTC36A6NLP5 189 aa3.29□□□□□ -1.88
PTPN4-205ENST00000433888 TNFSF14O43557 240 aa3.29□□□□□ -1.88
PTPN4-205ENST00000433888 GNAZP19086 355 aa3.29□□□□□ -1.88
PTPN4-205ENST00000433888 TYMPP19971 482 aa3.29□□□□□ -1.88
PTPN4-205ENST00000433888 ITGA3P26006 1051 aa3.29□□□□□ -1.88
PTPN4-205ENST00000433888 ABCD1P33897 745 aa3.29□□□□□ -1.88
PTPN4-205ENST00000433888 GALNT2Q10471 571 aa3.29□□□□□ -1.88
PTPN4-205ENST00000433888 OS9Q13438 667 aaPredicted RBP3.29□□□□□ -1.88
PTPN4-205ENST00000433888 BAK1Q16611 211 aa3.29□□□□□ -1.88
PTPN4-205ENST00000433888 DUOXA1Q1HG43 343 aa3.29□□□□□ -1.88
PTPN4-205ENST00000433888 CDONQ4KMG0 1287 aa3.29□□□□□ -1.88
PTPN4-205ENST00000433888 NSUN5P2Q63ZY6 315 aa3.29□□□□□ -1.88
PTPN4-205ENST00000433888 P2RY8Q86VZ1 359 aa3.29□□□□□ -1.88
PTPN4-205ENST00000433888 GBGT1Q8N5D6 347 aa3.29□□□□□ -1.88
PTPN4-205ENST00000433888 ZNF611Q8N823 705 aa3.29□□□□□ -1.88
PTPN4-205ENST00000433888 SLC38A9Q8NBW4 561 aa3.29□□□□□ -1.88
PTPN4-205ENST00000433888 OR2T6Q8NHC8 308 aa3.29□□□□□ -1.88
PTPN4-205ENST00000433888 IWS1Q96ST2 819 aa3.29□□□□□ -1.88
PTPN4-205ENST00000433888 RTP3Q9BQQ7 232 aa3.29□□□□□ -1.88
PTPN4-205ENST00000433888 SLC28A3Q9HAS3 691 aa3.29□□□□□ -1.88
PTPN4-205ENST00000433888 SARDHQ9UL12 918 aa3.29□□□□□ -1.88
PTPN4-205ENST00000433888 CAPN7Q9Y6W3 813 aa3.29□□□□□ -1.88
PTPN4-205ENST00000433888 EIF3FO00303 357 aaPredicted RBP3.28□□□□□ -1.88
PTPN4-205ENST00000433888 TSPAN4O14817 238 aa3.28□□□□□ -1.88
PTPN4-205ENST00000433888 PIP5K1CO60331 668 aa3.28□□□□□ -1.88
PTPN4-205ENST00000433888 LIPFP07098 398 aa3.28□□□□□ -1.88
PTPN4-205ENST00000433888 HNRNPA1P09651 372 aaKnown RBP eCLIP3.28□□□□□ -1.88
PTPN4-205ENST00000433888 IL7RP16871 459 aa3.28□□□□□ -1.88
PTPN4-205ENST00000433888 PAX3P23760 479 aa3.28□□□□□ -1.88
PTPN4-205ENST00000433888 NR2F2P24468 414 aa3.28□□□□□ -1.88
PTPN4-205ENST00000433888 KRTAP10-8P60410 259 aa3.28□□□□□ -1.88
PTPN4-205ENST00000433888 TLE2Q04725 743 aa3.28□□□□□ -1.88
PTPN4-205ENST00000433888 SMC5Q8IY18 1101 aa3.28□□□□□ -1.88
PTPN4-205ENST00000433888 ZNF614Q8N883 585 aa3.28□□□□□ -1.88
PTPN4-205ENST00000433888 GRHL3Q8TE85 626 aa3.28□□□□□ -1.88
PTPN4-205ENST00000433888 GTF3C6Q969F1 213 aa3.28□□□□□ -1.88
PTPN4-205ENST00000433888 C18orf12Q96KH6 178 aa3.28□□□□□ -1.88
PTPN4-205ENST00000433888 HARBI1Q96MB7 349 aa3.28□□□□□ -1.88
PTPN4-205ENST00000433888 TMEM68Q96MH6 324 aa3.28□□□□□ -1.88
PTPN4-205ENST00000433888 PRKRIP1Q9H875 184 aaPredicted RBP3.28□□□□□ -1.88
PTPN4-205ENST00000433888 SLC38A7Q9NVC3 462 aa3.28□□□□□ -1.88
PTPN4-205ENST00000433888 TMEM184BQ9Y519 407 aaPredicted RBP3.28□□□□□ -1.88
PTPN4-205ENST00000433888 COMMD10Q9Y6G5 202 aa3.28□□□□□ -1.88
PTPN4-205ENST00000433888 TEX13DA0A0J9YY54 714 aaPredicted RBP3.27□□□□□ -1.89
PTPN4-205ENST00000433888 C1orf226A1L170 272 aa3.27□□□□□ -1.89
PTPN4-205ENST00000433888 SLCO1B7G3V0H7 640 aa3.27□□□□□ -1.89
PTPN4-205ENST00000433888 PLOD2O00469 737 aa3.27□□□□□ -1.89
PTPN4-205ENST00000433888 KCNK5O95279 499 aa3.27□□□□□ -1.89
PTPN4-205ENST00000433888 NGFP01138 241 aa3.27□□□□□ -1.89
PTPN4-205ENST00000433888 FRMD6-AS1P0C7T7 363 aa3.27□□□□□ -1.89
PTPN4-205ENST00000433888 CEBPBP17676 345 aa3.27□□□□□ -1.89
PTPN4-205ENST00000433888 EPHA2P29317 976 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms