RNA–Protein interactions for RNA: ENST00000431540.7

CDH13-203, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-203ENST00000431540 UBXN7O94888 489 aa8.17□□□□□ -1.1
CDH13-203ENST00000431540 ASMTLO95671 621 aa8.17□□□□□ -1.1
CDH13-203ENST00000431540 PRLP01236 227 aa8.17□□□□□ -1.1
CDH13-203ENST00000431540 VIPP01282 170 aa8.17□□□□□ -1.1
CDH13-203ENST00000431540 PDHA1P08559 390 aa8.17□□□□□ -1.1
CDH13-203ENST00000431540 PYGMP11217 842 aa8.17□□□□□ -1.1
CDH13-203ENST00000431540 IL4RP24394 825 aa8.17□□□□□ -1.1
CDH13-203ENST00000431540 PMS2P54278 862 aa8.17□□□□□ -1.1
CDH13-203ENST00000431540 NFKB2Q00653 900 aa8.17□□□□□ -1.1
CDH13-203ENST00000431540 SKIDA1Q1XH10 827 aa8.17□□□□□ -1.1
CDH13-203ENST00000431540 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.17□□□□□ -1.1
CDH13-203ENST00000431540 LINC01559Q495D7 138 aa8.17□□□□□ -1.1
CDH13-203ENST00000431540 DENND2CQ68D51 928 aa8.17□□□□□ -1.1
CDH13-203ENST00000431540 LYPD4Q6UWN0 246 aa8.17□□□□□ -1.1
CDH13-203ENST00000431540 CHST15Q7LFX5 561 aaPredicted RBP8.17□□□□□ -1.1
CDH13-203ENST00000431540 PPP1R3BQ86XI6 285 aa8.17□□□□□ -1.1
CDH13-203ENST00000431540 PTRH1Q86Y79 214 aaKnown RBP8.17□□□□□ -1.1
CDH13-203ENST00000431540 TRAM1L1Q8N609 369 aa8.17□□□□□ -1.1
CDH13-203ENST00000431540 BEND7Q8N7W2 519 aaPredicted RBP8.17□□□□□ -1.1
CDH13-203ENST00000431540 PATE1Q8WXA2 126 aa8.17□□□□□ -1.1
CDH13-203ENST00000431540 SCAMP4Q969E2 229 aa8.17□□□□□ -1.1
CDH13-203ENST00000431540 LRFN5Q96NI6 719 aa8.17□□□□□ -1.1
CDH13-203ENST00000431540 VPS35Q96QK1 796 aa8.17□□□□□ -1.1
CDH13-203ENST00000431540 CD180Q99467 661 aa8.17□□□□□ -1.1
CDH13-203ENST00000431540 C19orf43Q9BQ61 176 aa8.17□□□□□ -1.1
CDH13-203ENST00000431540 ZNF670Q9BS34 389 aa8.17□□□□□ -1.1
CDH13-203ENST00000431540 RIOK2Q9BVS4 552 aaKnown RBP8.17□□□□□ -1.1
CDH13-203ENST00000431540 HAUS4Q9H6D7 363 aa8.17□□□□□ -1.1
CDH13-203ENST00000431540 PCDH9Q9HC56 1237 aa8.17□□□□□ -1.1
CDH13-203ENST00000431540 PDE7BQ9NP56 450 aa8.17□□□□□ -1.1
CDH13-203ENST00000431540 GPATCH2LQ9NWQ4 482 aa8.17□□□□□ -1.1
CDH13-203ENST00000431540 TMEM98Q9Y2Y6 226 aa8.17□□□□□ -1.1
CDH13-203ENST00000431540 TNRC6AQ8NDV7 1962 aaKnown RBP8.17□□□□□ -1.1
CDH13-203ENST00000431540 PIKFYVEQ9Y2I7 2098 aa8.17□□□□□ -1.1
CDH13-203ENST00000431540 SPTBP11277 2137 aa8.17□□□□□ -1.1
CDH13-203ENST00000431540 GOLGA6CA6NDK9 693 aa8.16□□□□□ -1.1
CDH13-203ENST00000431540 GOLGA6BA6NDN3 693 aa8.16□□□□□ -1.1
CDH13-203ENST00000431540 SMTNL1A8MU46 457 aa8.16□□□□□ -1.1
CDH13-203ENST00000431540 VPS4BO75351 444 aa8.16□□□□□ -1.1
CDH13-203ENST00000431540 MAP3K6O95382 1288 aa8.16□□□□□ -1.1
CDH13-203ENST00000431540 CLDN7O95471 211 aa8.16□□□□□ -1.1
CDH13-203ENST00000431540 EPOP01588 193 aa8.16□□□□□ -1.1
CDH13-203ENST00000431540 JCHAINP01591 159 aa8.16□□□□□ -1.1
CDH13-203ENST00000431540 KRT7P08729 469 aa8.16□□□□□ -1.1
CDH13-203ENST00000431540 CD63P08962 238 aa8.16□□□□□ -1.1
CDH13-203ENST00000431540 MSL3P1P0C860 447 aa8.16□□□□□ -1.1
CDH13-203ENST00000431540 GOLGA6DP0CG33 693 aa8.16□□□□□ -1.1
CDH13-203ENST00000431540 NELFEP18615 380 aaKnown RBP8.16□□□□□ -1.1
CDH13-203ENST00000431540 LPOP22079 712 aaPredicted RBP8.16□□□□□ -1.1
CDH13-203ENST00000431540 IDSP22304 550 aa8.16□□□□□ -1.1
CDH13-203ENST00000431540 OAS2P29728 719 aaKnown RBP8.16□□□□□ -1.1
CDH13-203ENST00000431540 DLSTP36957 453 aa8.16□□□□□ -1.1
CDH13-203ENST00000431540 CENPEQ02224 2701 aa8.16□□□□□ -1.1
CDH13-203ENST00000431540 ACY1Q03154 408 aa8.16□□□□□ -1.1
CDH13-203ENST00000431540 DMPKQ09013 629 aa8.16□□□□□ -1.1
CDH13-203ENST00000431540 KLHL30Q0D2K2 578 aa8.16□□□□□ -1.1
CDH13-203ENST00000431540 SEMA5AQ13591 1074 aa8.16□□□□□ -1.1
CDH13-203ENST00000431540 TCEA2Q15560 299 aa8.16□□□□□ -1.1
CDH13-203ENST00000431540 STX1AQ16623 288 aa8.16□□□□□ -1.1
CDH13-203ENST00000431540 DEFB109BQ30KR1 87 aa8.16□□□□□ -1.1
CDH13-203ENST00000431540 C4orf17Q53FE4 359 aa8.16□□□□□ -1.1
CDH13-203ENST00000431540 ZNF517Q6ZMY9 492 aaPredicted RBP8.16□□□□□ -1.1
CDH13-203ENST00000431540 ASB18Q6ZVZ8 466 aa8.16□□□□□ -1.1
CDH13-203ENST00000431540 TMC3Q7Z5M5 1100 aa8.16□□□□□ -1.1
CDH13-203ENST00000431540 SYVN1Q86TM6 617 aa8.16□□□□□ -1.1
CDH13-203ENST00000431540 TSPAN33Q86UF1 283 aa8.16□□□□□ -1.1
CDH13-203ENST00000431540 LURAP1LQ8IV03 231 aa8.16□□□□□ -1.1
CDH13-203ENST00000431540 ZNF511Q8NB15 262 aa8.16□□□□□ -1.1
CDH13-203ENST00000431540 ARRDC2Q8TBH0 407 aa8.16□□□□□ -1.1
CDH13-203ENST00000431540 JPH3Q8WXH2 748 aaPredicted RBP8.16□□□□□ -1.1
CDH13-203ENST00000431540 FAF2Q96CS3 445 aa8.16□□□□□ -1.1
CDH13-203ENST00000431540 HDAC11Q96DB2 347 aa8.16□□□□□ -1.1
CDH13-203ENST00000431540 ZNF514Q96K75 400 aaPredicted RBP8.16□□□□□ -1.1
CDH13-203ENST00000431540 PLEKHG4BQ96PX9 1271 aa8.16□□□□□ -1.1
CDH13-203ENST00000431540 WDR24Q96S15 920 aa8.16□□□□□ -1.1
CDH13-203ENST00000431540 ULBP3Q9BZM4 244 aa8.16□□□□□ -1.1
CDH13-203ENST00000431540 TRABDQ9H4I3 376 aa8.16□□□□□ -1.1
CDH13-203ENST00000431540 ZFYVE1Q9HBF4 777 aa8.16□□□□□ -1.1
CDH13-203ENST00000431540 PCDH18Q9HCL0 1135 aa8.16□□□□□ -1.1
CDH13-203ENST00000431540 SLC40A1Q9NP59 571 aa8.16□□□□□ -1.1
CDH13-203ENST00000431540 NT5MQ9NPB1 228 aa8.16□□□□□ -1.1
CDH13-203ENST00000431540 LATS2Q9NRM7 1088 aa8.16□□□□□ -1.1
CDH13-203ENST00000431540 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.16□□□□□ -1.1
CDH13-203ENST00000431540 RBM22Q9NW64 420 aaKnown RBP eCLIP8.16□□□□□ -1.1
CDH13-203ENST00000431540 GOLGA6AQ9NYA3 693 aa8.16□□□□□ -1.1
CDH13-203ENST00000431540 TAS2R14Q9NYV8 317 aa8.16□□□□□ -1.1
CDH13-203ENST00000431540 TMEM9Q9P0T7 183 aa8.16□□□□□ -1.1
CDH13-203ENST00000431540 UNC79Q9P2D8 2635 aa8.16□□□□□ -1.1
CDH13-203ENST00000431540 VPS4AQ9UN37 437 aa8.16□□□□□ -1.1
CDH13-203ENST00000431540 CCDC88CQ9P219 2028 aa8.15□□□□□ -1.1
CDH13-203ENST00000431540 RELNP78509 3460 aa8.15□□□□□ -1.1
CDH13-203ENST00000431540 UTP20O75691 2785 aaKnown RBP8.15□□□□□ -1.1
CDH13-203ENST00000431540 C1orf232A0A0U1RR37 186 aa8.15□□□□□ -1.1
CDH13-203ENST00000431540 A0A1W2PQJ5 194 aa8.15□□□□□ -1.1
CDH13-203ENST00000431540 A8MU76 341 aa8.15□□□□□ -1.1
CDH13-203ENST00000431540 PYCARD-AS1I3L0S3 204 aa8.15□□□□□ -1.1
CDH13-203ENST00000431540 DDX3XO00571 662 aaKnown RBP eCLIP8.15□□□□□ -1.1
CDH13-203ENST00000431540 SPAG6O75602 509 aa8.15□□□□□ -1.1
CDH13-203ENST00000431540 MTA2O94776 668 aa8.15□□□□□ -1.1
CDH13-203ENST00000431540 SLC25A14O95258 325 aaPredicted RBP8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms