RNA–Protein interactions for RNA: ENST00000428726.6

CD44-208, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CD44, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-208ENST00000428726 ALDH1A1P00352 501 aa8.29□□□□□ -1.08
CD44-208ENST00000428726 URODP06132 367 aa8.29□□□□□ -1.08
CD44-208ENST00000428726 THRAP10827 490 aa8.29□□□□□ -1.08
CD44-208ENST00000428726 WASP42768 502 aa8.29□□□□□ -1.08
CD44-208ENST00000428726 PFKPQ01813 784 aa8.29□□□□□ -1.08
CD44-208ENST00000428726 ROR2Q01974 943 aaKnown RBP8.29□□□□□ -1.08
CD44-208ENST00000428726 CLCQ05315 142 aa8.29□□□□□ -1.08
CD44-208ENST00000428726 LAPTM4AQ15012 233 aa8.29□□□□□ -1.08
CD44-208ENST00000428726 PDK3Q15120 406 aa8.29□□□□□ -1.08
CD44-208ENST00000428726 PHKG1Q16816 387 aa8.29□□□□□ -1.08
CD44-208ENST00000428726 DGKKQ5KSL6 1271 aa8.29□□□□□ -1.08
CD44-208ENST00000428726 IL27RAQ6UWB1 636 aa8.29□□□□□ -1.08
CD44-208ENST00000428726 FUNDC1Q8IVP5 155 aa8.29□□□□□ -1.08
CD44-208ENST00000428726 CLEC4FQ8N1N0 589 aa8.29□□□□□ -1.08
CD44-208ENST00000428726 FNDC5Q8NAU1 212 aa8.29□□□□□ -1.08
CD44-208ENST00000428726 CALML6Q8TD86 181 aa8.29□□□□□ -1.08
CD44-208ENST00000428726 STON2Q8WXE9 905 aa8.29□□□□□ -1.08
CD44-208ENST00000428726 ASIC4Q96FT7 647 aa8.29□□□□□ -1.08
CD44-208ENST00000428726 PLEKHG4BQ96PX9 1271 aa8.29□□□□□ -1.08
CD44-208ENST00000428726 MRPL1Q9BYD6 325 aaKnown RBP8.29□□□□□ -1.08
CD44-208ENST00000428726 CWH43Q9H720 699 aa8.29□□□□□ -1.08
CD44-208ENST00000428726 VTI1BQ9UEU0 232 aa8.29□□□□□ -1.08
CD44-208ENST00000428726 ZNF225Q9UK10 706 aa8.29□□□□□ -1.08
CD44-208ENST00000428726 COQ6Q9Y2Z9 468 aa8.29□□□□□ -1.08
CD44-208ENST00000428726 SLC30A1Q9Y6M5 507 aa8.29□□□□□ -1.08
CD44-208ENST00000428726 LOC285095A0A1B0GVY8 99 aa8.29□□□□□ -1.08
CD44-208ENST00000428726 KANSL1LA0AUZ9 987 aa8.29□□□□□ -1.08
CD44-208ENST00000428726 MROH6A6NGR9 719 aa8.29□□□□□ -1.08
CD44-208ENST00000428726 AKAP10O43572 662 aa8.29□□□□□ -1.08
CD44-208ENST00000428726 CXCL14O95715 111 aa8.29□□□□□ -1.08
CD44-208ENST00000428726 CAPN3P20807 821 aa8.29□□□□□ -1.08
CD44-208ENST00000428726 ITPKAP23677 461 aa8.29□□□□□ -1.08
CD44-208ENST00000428726 MAGEA11P43364 429 aa8.29□□□□□ -1.08
CD44-208ENST00000428726 STC1P52823 247 aa8.29□□□□□ -1.08
CD44-208ENST00000428726 CDH15P55291 814 aa8.29□□□□□ -1.08
CD44-208ENST00000428726 MTPNP58546 118 aa8.29□□□□□ -1.08
CD44-208ENST00000428726 ERVFC1P60507 584 aa8.29□□□□□ -1.08
CD44-208ENST00000428726 CDKL1Q00532 357 aa8.29□□□□□ -1.08
CD44-208ENST00000428726 PTGR1Q14914 329 aa8.29□□□□□ -1.08
CD44-208ENST00000428726 TLR1Q15399 786 aa8.29□□□□□ -1.08
CD44-208ENST00000428726 CHRNA6Q15825 494 aa8.29□□□□□ -1.08
CD44-208ENST00000428726 MAP7D1Q3KQU3 841 aa8.29□□□□□ -1.08
CD44-208ENST00000428726 LIN52Q52LA3 116 aa8.29□□□□□ -1.08
CD44-208ENST00000428726 CTSL3PQ5NE16 218 aa8.29□□□□□ -1.08
CD44-208ENST00000428726 ANKRD34AQ69YU3 496 aa8.29□□□□□ -1.08
CD44-208ENST00000428726 REP15Q6BDI9 236 aa8.29□□□□□ -1.08
CD44-208ENST00000428726 AAGABQ6PD74 315 aa8.29□□□□□ -1.08
CD44-208ENST00000428726 RBM44Q6ZP01 1051 aaKnown RBP8.29□□□□□ -1.08
CD44-208ENST00000428726 SYVN1Q86TM6 617 aa8.29□□□□□ -1.08
CD44-208ENST00000428726 LRRC43Q8N309 656 aa8.29□□□□□ -1.08
CD44-208ENST00000428726 PARP8Q8N3A8 854 aa8.29□□□□□ -1.08
CD44-208ENST00000428726 OR2T11Q8NH01 316 aa8.29□□□□□ -1.08
CD44-208ENST00000428726 B4GALNT2Q8NHY0 566 aa8.29□□□□□ -1.08
CD44-208ENST00000428726 ACTRT2Q8TDY3 377 aa8.29□□□□□ -1.08
CD44-208ENST00000428726 LRGUKQ96M69 825 aa8.29□□□□□ -1.08
CD44-208ENST00000428726 RANBP9Q96S59 729 aa8.29□□□□□ -1.08
CD44-208ENST00000428726 INTS7Q9NVH2 962 aaKnown RBP8.29□□□□□ -1.08
CD44-208ENST00000428726 TRMT6Q9UJA5 497 aaKnown RBP8.29□□□□□ -1.08
CD44-208ENST00000428726 SH3BP1Q9Y3L3 701 aa8.29□□□□□ -1.08
CD44-208ENST00000428726 PIKFYVEQ9Y2I7 2098 aa8.28□□□□□ -1.08
CD44-208ENST00000428726 MAGEB3O15480 346 aa8.28□□□□□ -1.08
CD44-208ENST00000428726 GBAP04062 536 aa8.28□□□□□ -1.08
CD44-208ENST00000428726 HLA-EP13747 358 aa8.28□□□□□ -1.08
CD44-208ENST00000428726 IRS1P35568 1242 aa8.28□□□□□ -1.08
CD44-208ENST00000428726 INHBCP55103 352 aa8.28□□□□□ -1.08
CD44-208ENST00000428726 VEPH1Q14D04 833 aa8.28□□□□□ -1.08
CD44-208ENST00000428726 LRRC26Q2I0M4 334 aa8.28□□□□□ -1.08
CD44-208ENST00000428726 ZIK1Q3SY52 487 aaPredicted RBP8.28□□□□□ -1.08
CD44-208ENST00000428726 PAGE3Q5JUK9 113 aa8.28□□□□□ -1.08
CD44-208ENST00000428726 OTUD3Q5T2D3 398 aaPredicted RBP8.28□□□□□ -1.08
CD44-208ENST00000428726 ACBD5Q5T8D3 534 aaPredicted RBP8.28□□□□□ -1.08
CD44-208ENST00000428726 ADNP2Q6IQ32 1131 aa8.28□□□□□ -1.08
CD44-208ENST00000428726 SLC2A7Q6PXP3 512 aa8.28□□□□□ -1.08
CD44-208ENST00000428726 SERPINA9Q86WD7 417 aa8.28□□□□□ -1.08
CD44-208ENST00000428726 GPSM1Q86YR5 675 aa8.28□□□□□ -1.08
CD44-208ENST00000428726 DLG3Q92796 817 aa8.28□□□□□ -1.08
CD44-208ENST00000428726 SPATA16Q9BXB7 569 aa8.28□□□□□ -1.08
CD44-208ENST00000428726 EFCAB1Q9HAE3 211 aa8.28□□□□□ -1.08
CD44-208ENST00000428726 OLA1Q9NTK5 396 aaKnown RBP8.28□□□□□ -1.08
CD44-208ENST00000428726 ETAA1Q9NY74 926 aa8.28□□□□□ -1.08
CD44-208ENST00000428726 TAS2R13Q9NYV9 303 aa8.28□□□□□ -1.08
CD44-208ENST00000428726 UBAP1Q9NZ09 502 aa8.28□□□□□ -1.08
CD44-208ENST00000428726 IL37Q9NZH6 218 aa8.28□□□□□ -1.08
CD44-208ENST00000428726 INTS6Q9UL03 887 aaKnown RBP8.28□□□□□ -1.08
CD44-208ENST00000428726 PLXNA3P51805 1871 aa8.28□□□□□ -1.08
CD44-208ENST00000428726 H3BNX3 289 aa8.28□□□□□ -1.08
CD44-208ENST00000428726 PLOD2O00469 737 aa8.28□□□□□ -1.08
CD44-208ENST00000428726 STATHP02808 62 aa8.28□□□□□ -1.08
CD44-208ENST00000428726 CAPN1P07384 714 aa8.28□□□□□ -1.08
CD44-208ENST00000428726 LPOP22079 712 aaPredicted RBP8.28□□□□□ -1.08
CD44-208ENST00000428726 HNF1BP35680 557 aa8.28□□□□□ -1.08
CD44-208ENST00000428726 CLCN5P51795 746 aa8.28□□□□□ -1.08
CD44-208ENST00000428726 IST1P53990 364 aa8.28□□□□□ -1.08
CD44-208ENST00000428726 LMAN2Q12907 356 aa8.28□□□□□ -1.08
CD44-208ENST00000428726 LAPTM5Q13571 262 aa8.28□□□□□ -1.08
CD44-208ENST00000428726 PARP15Q460N3 678 aa8.28□□□□□ -1.08
CD44-208ENST00000428726 ASTLQ6HA08 431 aaPredicted RBP8.28□□□□□ -1.08
CD44-208ENST00000428726 PGM2L1Q6PCE3 622 aa8.28□□□□□ -1.08
CD44-208ENST00000428726 SLC39A5Q6ZMH5 540 aa8.28□□□□□ -1.08
CD44-208ENST00000428726 KLHL23Q8NBE8 558 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms