RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 SEPT4O43236 478 aa8.88□□□□□ -0.99
CTNND1-208ENST00000428599 B3GALT2O43825 422 aa8.88□□□□□ -0.99
CTNND1-208ENST00000428599 RPP40O75818 363 aaKnown RBP8.88□□□□□ -0.99
CTNND1-208ENST00000428599 INHAP05111 366 aa8.88□□□□□ -0.99
CTNND1-208ENST00000428599 FOSL2P15408 326 aa8.88□□□□□ -0.99
CTNND1-208ENST00000428599 CACNG1Q06432 222 aa8.88□□□□□ -0.99
CTNND1-208ENST00000428599 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.88□□□□□ -0.99
CTNND1-208ENST00000428599 GCNT6Q5T4J0 391 aa8.88□□□□□ -0.99
CTNND1-208ENST00000428599 FRRS1Q6ZNA5 592 aa8.88□□□□□ -0.99
CTNND1-208ENST00000428599 AMIGO3Q86WK7 504 aa8.88□□□□□ -0.99
CTNND1-208ENST00000428599 GPALPP1Q8IXQ4 340 aa8.88□□□□□ -0.99
CTNND1-208ENST00000428599 C12orf56Q8IXR9 622 aa8.88□□□□□ -0.99
CTNND1-208ENST00000428599 C2orf73Q8N5S3 287 aaPredicted RBP8.88□□□□□ -0.99
CTNND1-208ENST00000428599 SMPDL3BQ92485 455 aa8.88□□□□□ -0.99
CTNND1-208ENST00000428599 PCBD2Q9H0N5 130 aa8.88□□□□□ -0.99
CTNND1-208ENST00000428599 IFT46Q9NQC8 304 aa8.88□□□□□ -0.99
CTNND1-208ENST00000428599 ZNF490Q9ULM2 529 aaPredicted RBP8.88□□□□□ -0.99
CTNND1-208ENST00000428599 CNTNAP1P78357 1384 aa8.87□□□□□ -0.99
CTNND1-208ENST00000428599 H0YGN5 161 aa8.87□□□□□ -0.99
CTNND1-208ENST00000428599 CA12O43570 354 aa8.87□□□□□ -0.99
CTNND1-208ENST00000428599 HCN1O60741 890 aa8.87□□□□□ -0.99
CTNND1-208ENST00000428599 PAGE1O75459 146 aa8.87□□□□□ -0.99
CTNND1-208ENST00000428599 CLEC3AO75596 197 aa8.87□□□□□ -0.99
CTNND1-208ENST00000428599 GLI1P08151 1106 aa8.87□□□□□ -0.99
CTNND1-208ENST00000428599 ARL3P36405 182 aa8.87□□□□□ -0.99
CTNND1-208ENST00000428599 GDI2P50395 445 aaKnown RBP8.87□□□□□ -0.99
CTNND1-208ENST00000428599 ABATP80404 500 aa8.87□□□□□ -0.99
CTNND1-208ENST00000428599 CAP1Q01518 475 aa8.87□□□□□ -0.99
CTNND1-208ENST00000428599 ELOAQ14241 798 aaKnown RBP8.87□□□□□ -0.99
CTNND1-208ENST00000428599 ZACNQ401N2 412 aa8.87□□□□□ -0.99
CTNND1-208ENST00000428599 SLC9B1Q4ZJI4 515 aa8.87□□□□□ -0.99
CTNND1-208ENST00000428599 KCTD8Q6ZWB6 473 aa8.87□□□□□ -0.99
CTNND1-208ENST00000428599 SLC24A5Q71RS6 500 aa8.87□□□□□ -0.99
CTNND1-208ENST00000428599 SPATA19Q7Z5L4 167 aa8.87□□□□□ -0.99
CTNND1-208ENST00000428599 TMEM192Q8IY95 271 aa8.87□□□□□ -0.99
CTNND1-208ENST00000428599 SHDQ96IW2 340 aa8.87□□□□□ -0.99
CTNND1-208ENST00000428599 MFSD14AQ96MC6 490 aa8.87□□□□□ -0.99
CTNND1-208ENST00000428599 FAM129BQ96TA1 746 aa8.87□□□□□ -0.99
CTNND1-208ENST00000428599 CHCHD6Q9BRQ6 235 aa8.87□□□□□ -0.99
CTNND1-208ENST00000428599 MAGEL2Q9UJ55 1249 aa8.87□□□□□ -0.99
CTNND1-208ENST00000428599 STOML2Q9UJZ1 356 aa8.87□□□□□ -0.99
CTNND1-208ENST00000428599 FAM208AQ9UK61 1670 aaKnown RBP8.87□□□□□ -0.99
CTNND1-208ENST00000428599 C1RP00736 705 aa8.87□□□□□ -0.99
CTNND1-208ENST00000428599 HSD3B2P26439 372 aa8.87□□□□□ -0.99
CTNND1-208ENST00000428599 DHPSP49366 369 aaPredicted RBP8.87□□□□□ -0.99
CTNND1-208ENST00000428599 CLCN7P51798 805 aa8.87□□□□□ -0.99
CTNND1-208ENST00000428599 RGS8P57771 180 aaPredicted RBP8.87□□□□□ -0.99
CTNND1-208ENST00000428599 HSF2Q03933 536 aa8.87□□□□□ -0.99
CTNND1-208ENST00000428599 FCHO2Q0JRZ9 810 aa8.87□□□□□ -0.99
CTNND1-208ENST00000428599 VITQ6UXI7 678 aa8.87□□□□□ -0.99
CTNND1-208ENST00000428599 ARCQ7LC44 396 aa8.87□□□□□ -0.99
CTNND1-208ENST00000428599 OTOP2Q7RTS6 562 aa8.87□□□□□ -0.99
CTNND1-208ENST00000428599 SLC51AQ86UW1 340 aa8.87□□□□□ -0.99
CTNND1-208ENST00000428599 RASGRP3Q8IV61 690 aa8.87□□□□□ -0.99
CTNND1-208ENST00000428599 SFRP1Q8N474 314 aa8.87□□□□□ -0.99
CTNND1-208ENST00000428599 ZNF433Q8N7K0 673 aaPredicted RBP8.87□□□□□ -0.99
CTNND1-208ENST00000428599 C4orf32Q8N8J7 132 aa8.87□□□□□ -0.99
CTNND1-208ENST00000428599 C12orf29Q8N999 325 aa8.87□□□□□ -0.99
CTNND1-208ENST00000428599 XAGE5Q8WWM1 108 aa8.87□□□□□ -0.99
CTNND1-208ENST00000428599 NSMCE3Q96MG7 304 aa8.87□□□□□ -0.99
CTNND1-208ENST00000428599 GSDMCQ9BYG8 508 aa8.87□□□□□ -0.99
CTNND1-208ENST00000428599 ADAM7Q9H2U9 754 aa8.87□□□□□ -0.99
CTNND1-208ENST00000428599 PADI3Q9ULW8 664 aa8.87□□□□□ -0.99
CTNND1-208ENST00000428599 LOC102724159A0A0B4J2E5 919 aa8.87□□□□□ -0.99
CTNND1-208ENST00000428599 IGKV6D-41A0A0C4DH26 115 aa8.87□□□□□ -0.99
CTNND1-208ENST00000428599 UGT2B11O75310 529 aa8.87□□□□□ -0.99
CTNND1-208ENST00000428599 CD247P20963 164 aa8.87□□□□□ -0.99
CTNND1-208ENST00000428599 TCEA1P23193 301 aaKnown RBP8.87□□□□□ -0.99
CTNND1-208ENST00000428599 DDX6P26196 483 aaKnown RBP eCLIP8.87□□□□□ -0.991e-7■■□□□ 13.6
CTNND1-208ENST00000428599 ENPEPQ07075 957 aa8.87□□□□□ -0.99
CTNND1-208ENST00000428599 TAF10Q12962 218 aa8.87□□□□□ -0.99
CTNND1-208ENST00000428599 CRHR2Q13324 411 aa8.87□□□□□ -0.99
CTNND1-208ENST00000428599 PWP2Q15269 919 aaKnown RBP8.87□□□□□ -0.99
CTNND1-208ENST00000428599 C9orf57Q5W0N0 161 aa8.87□□□□□ -0.99
CTNND1-208ENST00000428599 TSHZ1Q6ZSZ6 1077 aa8.87□□□□□ -0.99
CTNND1-208ENST00000428599 NET1Q7Z628 596 aaPredicted RBP8.87□□□□□ -0.99
CTNND1-208ENST00000428599 FAM71AQ8IYT1 594 aa8.87□□□□□ -0.99
CTNND1-208ENST00000428599 OR2L3Q8NG85 312 aa8.87□□□□□ -0.99
CTNND1-208ENST00000428599 AZIN2Q96A70 460 aa8.87□□□□□ -0.99
CTNND1-208ENST00000428599 PRDM12Q9H4Q4 367 aa8.87□□□□□ -0.99
CTNND1-208ENST00000428599 GOLGA2P5Q9HBQ8 144 aa8.87□□□□□ -0.99
CTNND1-208ENST00000428599 VWA7Q9Y334 891 aa8.87□□□□□ -0.99
CTNND1-208ENST00000428599 PLIN4Q96Q06 1357 aa8.87□□□□□ -0.99
CTNND1-208ENST00000428599 HYKKA2RU49 373 aa8.87□□□□□ -0.99
CTNND1-208ENST00000428599 TGFB1I1O43294 461 aa8.87□□□□□ -0.99
CTNND1-208ENST00000428599 STBD1O95210 358 aa8.87□□□□□ -0.99
CTNND1-208ENST00000428599 UROSP10746 265 aa8.87□□□□□ -0.99
CTNND1-208ENST00000428599 ICAM3P32942 547 aa8.87□□□□□ -0.99
CTNND1-208ENST00000428599 RPL22P35268 128 aaKnown RBP8.87□□□□□ -0.99
CTNND1-208ENST00000428599 GRK6P43250 576 aa8.87□□□□□ -0.99
CTNND1-208ENST00000428599 PNLIPRP1P54315 467 aa8.87□□□□□ -0.99
CTNND1-208ENST00000428599 OLR1P78380 273 aa8.87□□□□□ -0.99
CTNND1-208ENST00000428599 PRR5P85299 388 aa8.87□□□□□ -0.99
CTNND1-208ENST00000428599 SLC13A2Q13183 592 aa8.87□□□□□ -0.99
CTNND1-208ENST00000428599 SNAPC1Q16533 368 aa8.87□□□□□ -0.99
CTNND1-208ENST00000428599 PDSS1Q5T2R2 415 aa8.87□□□□□ -0.99
CTNND1-208ENST00000428599 ALG1LQ6GMV1 187 aa8.87□□□□□ -0.99
CTNND1-208ENST00000428599 MED27Q6P2C8 311 aa8.87□□□□□ -0.99
CTNND1-208ENST00000428599 QSOX2Q6ZRP7 698 aa8.87□□□□□ -0.99
CTNND1-208ENST00000428599 ADGRG6Q86SQ4 1221 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms