RNA–Protein interactions for RNA: ENST00000424922.5

CALD1-206, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-206ENST00000424922 COL6A3P12111 3177 aa14.87□□□□□ -0.03
CALD1-206ENST00000424922 UBA6A0AVT1 1052 aaPredicted RBP14.87□□□□□ -0.03
CALD1-206ENST00000424922 PHGDHO43175 533 aaKnown RBP14.87□□□□□ -0.03
CALD1-206ENST00000424922 KLF8O95600 359 aaPredicted RBP14.87□□□□□ -0.03
CALD1-206ENST00000424922 SRFP11831 508 aa14.87□□□□□ -0.03
CALD1-206ENST00000424922 ADRB3P13945 408 aa14.87□□□□□ -0.03
CALD1-206ENST00000424922 CD72P21854 359 aa14.87□□□□□ -0.03
CALD1-206ENST00000424922 SPINT3P49223 89 aa14.87□□□□□ -0.03
CALD1-206ENST00000424922 TTPAP49638 278 aa14.87□□□□□ -0.03
CALD1-206ENST00000424922 IDH3AP50213 366 aa14.87□□□□□ -0.03
CALD1-206ENST00000424922 RALGDSQ12967 914 aa14.87□□□□□ -0.03
CALD1-206ENST00000424922 CHRNA6Q15825 494 aa14.87□□□□□ -0.03
CALD1-206ENST00000424922 SDE2Q6IQ49 451 aa14.87□□□□□ -0.03
CALD1-206ENST00000424922 KIAA1211LQ6NV74 962 aa14.87□□□□□ -0.03
CALD1-206ENST00000424922 ZYG11AQ6WRX3 759 aa14.87□□□□□ -0.03
CALD1-206ENST00000424922 HSD11B1LQ7Z5J1 315 aa14.87□□□□□ -0.03
CALD1-206ENST00000424922 CEP97Q8IW35 865 aa14.87□□□□□ -0.03
CALD1-206ENST00000424922 TCF12Q99081 682 aa14.87□□□□□ -0.03
CALD1-206ENST00000424922 RSPH9Q9H1X1 276 aaPredicted RBP14.87□□□□□ -0.03
CALD1-206ENST00000424922 PNPOQ9NVS9 261 aa14.87□□□□□ -0.03
CALD1-206ENST00000424922 OXSMQ9NWU1 459 aa14.87□□□□□ -0.03
CALD1-206ENST00000424922 NUMA1Q14980 2115 aa14.86□□□□□ -0.03
CALD1-206ENST00000424922 GLULP15104 373 aa14.86□□□□□ -0.03
CALD1-206ENST00000424922 STMN1P16949 149 aa14.86□□□□□ -0.03
CALD1-206ENST00000424922 UGT1A6P19224 532 aa14.86□□□□□ -0.03
CALD1-206ENST00000424922 UGT1A1P22309 533 aa14.86□□□□□ -0.03
CALD1-206ENST00000424922 UGT1A4P22310 534 aa14.86□□□□□ -0.03
CALD1-206ENST00000424922 PAX7P23759 505 aa14.86□□□□□ -0.03
CALD1-206ENST00000424922 ARRB2P32121 409 aa14.86□□□□□ -0.03
CALD1-206ENST00000424922 CA5AP35218 305 aa14.86□□□□□ -0.03
CALD1-206ENST00000424922 UGT1A3P35503 534 aa14.86□□□□□ -0.03
CALD1-206ENST00000424922 UGT1A5P35504 534 aa14.86□□□□□ -0.03
CALD1-206ENST00000424922 GCKP35557 465 aa14.86□□□□□ -0.03
CALD1-206ENST00000424922 PGM1P36871 562 aa14.86□□□□□ -0.03
CALD1-206ENST00000424922 ALDH18A1P54886 795 aaKnown RBP14.86□□□□□ -0.03
CALD1-206ENST00000424922 SLC12A2P55011 1212 aa14.86□□□□□ -0.03
CALD1-206ENST00000424922 TAS2R39P59534 338 aa14.86□□□□□ -0.03
CALD1-206ENST00000424922 IRF9Q00978 393 aa14.86□□□□□ -0.03
CALD1-206ENST00000424922 POU4F1Q01851 419 aa14.86□□□□□ -0.03
CALD1-206ENST00000424922 NFATC2Q13469 925 aa14.86□□□□□ -0.03
CALD1-206ENST00000424922 ZNF460Q14592 562 aa14.86□□□□□ -0.03
CALD1-206ENST00000424922 SLC44A4Q53GD3 710 aa14.86□□□□□ -0.03
CALD1-206ENST00000424922 AARS2Q5JTZ9 985 aaKnown RBP14.86□□□□□ -0.03
CALD1-206ENST00000424922 FAM46CQ5VWP2 391 aa14.86□□□□□ -0.03
CALD1-206ENST00000424922 ATG14Q6ZNE5 492 aa14.86□□□□□ -0.03
CALD1-206ENST00000424922 ERN2Q76MJ5 926 aaKnown RBP14.86□□□□□ -0.03
CALD1-206ENST00000424922 MAVSQ7Z434 540 aa14.86□□□□□ -0.03
CALD1-206ENST00000424922 SNX20Q7Z614 316 aa14.86□□□□□ -0.03
CALD1-206ENST00000424922 TXNDC5Q8NBS9 432 aaKnown RBP14.86□□□□□ -0.03
CALD1-206ENST00000424922 WRAP53Q9BUR4 548 aaKnown RBP14.86□□□□□ -0.03
CALD1-206ENST00000424922 CDH19Q9H159 772 aa14.86□□□□□ -0.03
CALD1-206ENST00000424922 SLC2A4RGQ9NR83 387 aa14.86□□□□□ -0.03
CALD1-206ENST00000424922 PKD2L2Q9NZM6 624 aa14.86□□□□□ -0.03
CALD1-206ENST00000424922 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.86□□□□□ -0.03
CALD1-206ENST00000424922 ANKRD12Q6UB98 2062 aa14.86□□□□□ -0.03
CALD1-206ENST00000424922 SHISA7A6NL88 538 aa14.86□□□□□ -0.03
CALD1-206ENST00000424922 LOC730098B7Z3J9 87 aa14.86□□□□□ -0.03
CALD1-206ENST00000424922 SPINT1O43278 529 aa14.86□□□□□ -0.03
CALD1-206ENST00000424922 OR1I1O60431 355 aa14.86□□□□□ -0.03
CALD1-206ENST00000424922 DIAPH2O60879 1101 aa14.86□□□□□ -0.03
CALD1-206ENST00000424922 RNASEH1O60930 286 aaKnown RBP14.86□□□□□ -0.03
CALD1-206ENST00000424922 ADAM23O75077 832 aa14.86□□□□□ -0.03
CALD1-206ENST00000424922 ELFN1P0C7U0 828 aa14.86□□□□□ -0.03
CALD1-206ENST00000424922 ITGALP20701 1170 aa14.86□□□□□ -0.03
CALD1-206ENST00000424922 CRABP2P29373 138 aa14.86□□□□□ -0.03
CALD1-206ENST00000424922 ETV3P41162 512 aa14.86□□□□□ -0.03
CALD1-206ENST00000424922 PTPN5P54829 565 aa14.86□□□□□ -0.03
CALD1-206ENST00000424922 RAB10P61026 200 aa14.86□□□□□ -0.03
CALD1-206ENST00000424922 CNTN1Q12860 1018 aa14.86□□□□□ -0.03
CALD1-206ENST00000424922 PDCD2Q16342 344 aaPredicted RBP14.86□□□□□ -0.03
CALD1-206ENST00000424922 PUS10Q3MIT2 529 aaKnown RBP14.86□□□□□ -0.03
CALD1-206ENST00000424922 HECTD2Q5U5R9 776 aa14.86□□□□□ -0.03
CALD1-206ENST00000424922 ZNF549Q6P9A3 640 aa14.86□□□□□ -0.03
CALD1-206ENST00000424922 LIPIQ6XZB0 460 aa14.86□□□□□ -0.03
CALD1-206ENST00000424922 RBM15BQ8NDT2 890 aaKnown RBP14.86□□□□□ -0.03
CALD1-206ENST00000424922 KCNV2Q8TDN2 545 aa14.86□□□□□ -0.03
CALD1-206ENST00000424922 FAM3CQ92520 227 aa14.86□□□□□ -0.03
CALD1-206ENST00000424922 LPGAT1Q92604 370 aa14.86□□□□□ -0.03
CALD1-206ENST00000424922 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.86□□□□□ -0.031e-7■■■■■ 35.3
CALD1-206ENST00000424922 OLFM1Q99784 485 aa14.86□□□□□ -0.03
CALD1-206ENST00000424922 GABRG3Q99928 467 aa14.86□□□□□ -0.03
CALD1-206ENST00000424922 VWA7Q9Y334 891 aa14.86□□□□□ -0.03
CALD1-206ENST00000424922 PRR5-ARHGAP8B1AHC4 643 aa14.85□□□□□ -0.03
CALD1-206ENST00000424922 F8W8V4 182 aa14.85□□□□□ -0.03
CALD1-206ENST00000424922 PFDN6O15212 129 aa14.85□□□□□ -0.03
CALD1-206ENST00000424922 MID1O15344 667 aa14.85□□□□□ -0.03
CALD1-206ENST00000424922 ENTPD5O75356 428 aa14.85□□□□□ -0.03
CALD1-206ENST00000424922 SLC35E2BP0CK96 405 aa14.85□□□□□ -0.03
CALD1-206ENST00000424922 FMO4P31512 558 aa14.85□□□□□ -0.03
CALD1-206ENST00000424922 P2RY2P41231 377 aa14.85□□□□□ -0.03
CALD1-206ENST00000424922 CDKN2DP55273 166 aa14.85□□□□□ -0.03
CALD1-206ENST00000424922 ARHGAP8P85298 464 aa14.85□□□□□ -0.03
CALD1-206ENST00000424922 STARD3Q14849 445 aa14.85□□□□□ -0.03
CALD1-206ENST00000424922 CST6Q15828 149 aa14.85□□□□□ -0.03
CALD1-206ENST00000424922 METTL21CQ5VZV1 264 aa14.85□□□□□ -0.03
CALD1-206ENST00000424922 ZDHHC20Q5W0Z9 365 aa14.85□□□□□ -0.03
CALD1-206ENST00000424922 Q6ZVL8 140 aa14.85□□□□□ -0.03
CALD1-206ENST00000424922 SERPINA9Q86WD7 417 aa14.85□□□□□ -0.03
CALD1-206ENST00000424922 TMEM151AQ8N4L1 468 aa14.85□□□□□ -0.03
CALD1-206ENST00000424922 SCG3Q8WXD2 468 aaKnown RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms