RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 PDXPQ96GD0 296 aa13.28□□□□□ -0.28
PRPF39-202ENST00000424478 HIC2Q96JB3 615 aa13.28□□□□□ -0.28
PRPF39-202ENST00000424478 GPR21Q99679 349 aa13.28□□□□□ -0.28
PRPF39-202ENST00000424478 APOOQ9BUR5 198 aa13.28□□□□□ -0.28
PRPF39-202ENST00000424478 CLPBQ9H078 707 aa13.28□□□□□ -0.28
PRPF39-202ENST00000424478 FGF22Q9HCT0 170 aa13.28□□□□□ -0.28
PRPF39-202ENST00000424478 EP300Q09472 2414 aaPredicted RBP13.27□□□□□ -0.28
PRPF39-202ENST00000424478 WNT1P04628 370 aa13.27□□□□□ -0.28
PRPF39-202ENST00000424478 IVLP07476 585 aa13.27□□□□□ -0.28
PRPF39-202ENST00000424478 OGNP20774 298 aaKnown RBP13.27□□□□□ -0.28
PRPF39-202ENST00000424478 HPDP32754 393 aaPredicted RBP13.27□□□□□ -0.28
PRPF39-202ENST00000424478 TMEM207Q6UWW9 146 aa13.27□□□□□ -0.28
PRPF39-202ENST00000424478 RAPH1Q70E73 1250 aa13.27□□□□□ -0.28
PRPF39-202ENST00000424478 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.27□□□□□ -0.28
PRPF39-202ENST00000424478 VPS11Q9H270 941 aa13.27□□□□□ -0.28
PRPF39-202ENST00000424478 TCEAL2Q9H3H9 227 aaPredicted RBP13.27□□□□□ -0.28
PRPF39-202ENST00000424478 TMBIM4Q9HC24 238 aa13.27□□□□□ -0.28
PRPF39-202ENST00000424478 METTL12A8MUP2 240 aa13.27□□□□□ -0.29
PRPF39-202ENST00000424478 PRMT5O14744 637 aaPredicted RBP13.27□□□□□ -0.29
PRPF39-202ENST00000424478 RHOBTB1O94844 696 aa13.27□□□□□ -0.29
PRPF39-202ENST00000424478 SPRP35270 261 aaPredicted RBP13.27□□□□□ -0.29
PRPF39-202ENST00000424478 CSNK1EP49674 416 aaKnown RBP13.27□□□□□ -0.29
PRPF39-202ENST00000424478 IRX4P78413 519 aa13.27□□□□□ -0.29
PRPF39-202ENST00000424478 SFSWAPQ12872 951 aaKnown RBP13.27□□□□□ -0.29
PRPF39-202ENST00000424478 BOP1Q14137 746 aaKnown RBP13.27□□□□□ -0.29
PRPF39-202ENST00000424478 FRG1Q14331 258 aaKnown RBP13.27□□□□□ -0.29
PRPF39-202ENST00000424478 GPR33Q49SQ1 333 aa13.27□□□□□ -0.29
PRPF39-202ENST00000424478 GRTP1Q5TC63 336 aa13.27□□□□□ -0.29
PRPF39-202ENST00000424478 TMEM220Q6QAJ8 160 aa13.27□□□□□ -0.29
PRPF39-202ENST00000424478 ENPP7Q6UWV6 458 aa13.27□□□□□ -0.29
PRPF39-202ENST00000424478 LRIG3Q6UXM1 1119 aa13.27□□□□□ -0.29
PRPF39-202ENST00000424478 PRR23BQ6ZRT6 265 aa13.27□□□□□ -0.29
PRPF39-202ENST00000424478 ZNF547Q8IVP9 402 aa13.27□□□□□ -0.29
PRPF39-202ENST00000424478 ANKRD49Q8WVL7 239 aa13.27□□□□□ -0.29
PRPF39-202ENST00000424478 DCUN1D1Q96GG9 259 aa13.27□□□□□ -0.29
PRPF39-202ENST00000424478 P2RY12Q9H244 342 aa13.27□□□□□ -0.29
PRPF39-202ENST00000424478 SMOC1Q9H4F8 434 aa13.27□□□□□ -0.29
PRPF39-202ENST00000424478 SNX15Q9NRS6 342 aa13.27□□□□□ -0.29
PRPF39-202ENST00000424478 CIDEBQ9UHD4 219 aa13.27□□□□□ -0.29
PRPF39-202ENST00000424478 ZNHIT2Q9UHR6 403 aa13.27□□□□□ -0.29
PRPF39-202ENST00000424478 SLC24A2Q9UI40 661 aa13.27□□□□□ -0.29
PRPF39-202ENST00000424478 A0A1W2PPC4 97 aa13.26□□□□□ -0.29
PRPF39-202ENST00000424478 FPGTO14772 594 aa13.26□□□□□ -0.29
PRPF39-202ENST00000424478 MAGOHP61326 146 aaKnown RBP13.26□□□□□ -0.29
PRPF39-202ENST00000424478 NEK5Q6P3R8 708 aa13.26□□□□□ -0.29
PRPF39-202ENST00000424478 RBFAQ8N0V3 343 aa13.26□□□□□ -0.29
PRPF39-202ENST00000424478 PLD6Q8N2A8 252 aaKnown RBP13.26□□□□□ -0.29
PRPF39-202ENST00000424478 TMEM145Q8NBT3 493 aa13.26□□□□□ -0.29
PRPF39-202ENST00000424478 KDM4CQ9H3R0 1056 aa13.26□□□□□ -0.29
PRPF39-202ENST00000424478 SLC23A2Q9UGH3 650 aa13.26□□□□□ -0.29
PRPF39-202ENST00000424478 KMT2EQ8IZD2 1858 aa13.26□□□□□ -0.29
PRPF39-202ENST00000424478 RFPL1O75677 317 aa13.26□□□□□ -0.29
PRPF39-202ENST00000424478 SP9P0CG40 484 aa13.26□□□□□ -0.29
PRPF39-202ENST00000424478 ATP1B2P14415 290 aaPredicted RBP13.26□□□□□ -0.29
PRPF39-202ENST00000424478 PKMP14618 531 aaKnown RBP13.26□□□□□ -0.29
PRPF39-202ENST00000424478 KRT4P19013 534 aa13.26□□□□□ -0.29
PRPF39-202ENST00000424478 PREPP48147 710 aa13.26□□□□□ -0.29
PRPF39-202ENST00000424478 GLRBP48167 497 aa13.26□□□□□ -0.29
PRPF39-202ENST00000424478 SEPT7Q16181 437 aaKnown RBP13.26□□□□□ -0.29
PRPF39-202ENST00000424478 CDHR3Q6ZTQ4 885 aa13.26□□□□□ -0.29
PRPF39-202ENST00000424478 CHST15Q7LFX5 561 aaPredicted RBP13.26□□□□□ -0.29
PRPF39-202ENST00000424478 EXOC3L1Q86VI1 746 aa13.26□□□□□ -0.29
PRPF39-202ENST00000424478 DDHD1Q8NEL9 900 aa13.26□□□□□ -0.29
PRPF39-202ENST00000424478 CCL4L1Q8NHW4 92 aa13.26□□□□□ -0.29
PRPF39-202ENST00000424478 AARSD1Q9BTE6 412 aaKnown RBP13.26□□□□□ -0.29
PRPF39-202ENST00000424478 CYP4F12Q9HCS2 524 aa13.26□□□□□ -0.29
PRPF39-202ENST00000424478 ST14Q9Y5Y6 855 aa13.26□□□□□ -0.29
PRPF39-202ENST00000424478 GOLGA4Q13439 2230 aaKnown RBP13.26□□□□□ -0.29
PRPF39-202ENST00000424478 SNRPAP09012 282 aaKnown RBP13.26□□□□□ -0.29
PRPF39-202ENST00000424478 ZNF7P17097 686 aaPredicted RBP13.26□□□□□ -0.29
PRPF39-202ENST00000424478 TYK2P29597 1187 aa13.26□□□□□ -0.29
PRPF39-202ENST00000424478 AKT2P31751 481 aa13.26□□□□□ -0.29
PRPF39-202ENST00000424478 AARS2Q5JTZ9 985 aaKnown RBP13.26□□□□□ -0.29
PRPF39-202ENST00000424478 C16orf46Q6P387 395 aa13.26□□□□□ -0.29
PRPF39-202ENST00000424478 PAQR3Q6TCH7 311 aa13.26□□□□□ -0.29
PRPF39-202ENST00000424478 ZNF765Q7L2R6 523 aa13.26□□□□□ -0.29
PRPF39-202ENST00000424478 LONP2Q86WA8 852 aa13.26□□□□□ -0.29
PRPF39-202ENST00000424478 VRK3Q8IV63 474 aa13.26□□□□□ -0.29
PRPF39-202ENST00000424478 GPR22Q99680 433 aa13.26□□□□□ -0.29
PRPF39-202ENST00000424478 TEX101Q9BY14 249 aa13.26□□□□□ -0.29
PRPF39-202ENST00000424478 CCDC68Q9H2F9 335 aa13.26□□□□□ -0.29
PRPF39-202ENST00000424478 VIPAS39Q9H9C1 493 aa13.26□□□□□ -0.29
PRPF39-202ENST00000424478 KLF15Q9UIH9 416 aa13.26□□□□□ -0.29
PRPF39-202ENST00000424478 VWA7Q9Y334 891 aa13.26□□□□□ -0.29
PRPF39-202ENST00000424478 DMXL1Q9Y485 3027 aa13.25□□□□□ -0.29
PRPF39-202ENST00000424478 RGSL1A5PLK6 1076 aa13.25□□□□□ -0.29
PRPF39-202ENST00000424478 E5RI56 91 aa13.25□□□□□ -0.29
PRPF39-202ENST00000424478 TRIM23P36406 574 aa13.25□□□□□ -0.29
PRPF39-202ENST00000424478 GYS2P54840 703 aa13.25□□□□□ -0.29
PRPF39-202ENST00000424478 ZDHHC20Q5W0Z9 365 aa13.25□□□□□ -0.29
PRPF39-202ENST00000424478 RAVER1Q8IY67 606 aaKnown RBP13.25□□□□□ -0.29
PRPF39-202ENST00000424478 CPNE9Q8IYJ1 553 aa13.25□□□□□ -0.29
PRPF39-202ENST00000424478 OR1E3Q8WZA6 343 aa13.25□□□□□ -0.29
PRPF39-202ENST00000424478 COX14Q96I36 57 aa13.25□□□□□ -0.29
PRPF39-202ENST00000424478 ACSS2Q9NR19 701 aa13.25□□□□□ -0.29
PRPF39-202ENST00000424478 INTS10Q9NVR2 710 aaKnown RBP13.25□□□□□ -0.29
PRPF39-202ENST00000424478 GULP1Q9UBP9 304 aa13.25□□□□□ -0.29
PRPF39-202ENST00000424478 ZFHX2Q9C0A1 2572 aaPredicted RBP13.25□□□□□ -0.29
PRPF39-202ENST00000424478 GOLGA6L10A6NI86 522 aa13.25□□□□□ -0.29
PRPF39-202ENST00000424478 TCEA3O75764 348 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms