RNA–Protein interactions for RNA: ENST00000424438.5

RPUSD3-204, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2 BASIC

Gene RPUSD3, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-204ENST00000424438 RAD18Q9NS91 495 aa15.31■□□□□ 0.04
RPUSD3-204ENST00000424438 SCHIP1Q9P0W5 487 aaPredicted RBP15.31■□□□□ 0.04
RPUSD3-204ENST00000424438 RARRES3Q9UL19 164 aa15.31■□□□□ 0.04
RPUSD3-204ENST00000424438 SETD2Q9BYW2 2564 aaPredicted RBP15.31■□□□□ 0.04
RPUSD3-204ENST00000424438 C1orf232A0A0U1RR37 186 aa15.3■□□□□ 0.04
RPUSD3-204ENST00000424438 SSU72P8A0A1W2PR75 194 aa15.3■□□□□ 0.04
RPUSD3-204ENST00000424438 KMOO15229 486 aa15.3■□□□□ 0.04
RPUSD3-204ENST00000424438 DPM1O60762 260 aa15.3■□□□□ 0.04
RPUSD3-204ENST00000424438 KCNJ13O60928 360 aa15.3■□□□□ 0.04
RPUSD3-204ENST00000424438 RASSF9O75901 435 aa15.3■□□□□ 0.04
RPUSD3-204ENST00000424438 DNAJB5O75953 348 aa15.3■□□□□ 0.04
RPUSD3-204ENST00000424438 ZNF8P17098 575 aaPredicted RBP15.3■□□□□ 0.04
RPUSD3-204ENST00000424438 TYRP1P17643 537 aa15.3■□□□□ 0.04
RPUSD3-204ENST00000424438 LEPRP48357 1165 aaKnown RBP15.3■□□□□ 0.04
RPUSD3-204ENST00000424438 SEPHS1P49903 392 aa15.3■□□□□ 0.04
RPUSD3-204ENST00000424438 ACY1Q03154 408 aa15.3■□□□□ 0.04
RPUSD3-204ENST00000424438 GALNT2Q10471 571 aa15.3■□□□□ 0.04
RPUSD3-204ENST00000424438 NAA30Q147X3 362 aaPredicted RBP15.3■□□□□ 0.04
RPUSD3-204ENST00000424438 INPP5JQ15735 1006 aaPredicted RBP15.3■□□□□ 0.04
RPUSD3-204ENST00000424438 CACHD1Q5VU97 1274 aa15.3■□□□□ 0.04
RPUSD3-204ENST00000424438 TRIM48Q8IWZ4 208 aa15.3■□□□□ 0.04
RPUSD3-204ENST00000424438 CARFQ8N187 725 aa15.3■□□□□ 0.04
RPUSD3-204ENST00000424438 NIPA2Q8N8Q9 360 aa15.3■□□□□ 0.04
RPUSD3-204ENST00000424438 OR8K5Q8NH50 307 aa15.3■□□□□ 0.04
RPUSD3-204ENST00000424438 PCMTD1Q96MG8 357 aaPredicted RBP15.3■□□□□ 0.04
RPUSD3-204ENST00000424438 LRFN5Q96NI6 719 aa15.3■□□□□ 0.04
RPUSD3-204ENST00000424438 SMIM14Q96QK8 99 aa15.3■□□□□ 0.04
RPUSD3-204ENST00000424438 CD180Q99467 661 aa15.3■□□□□ 0.04
RPUSD3-204ENST00000424438 PCDH9Q9HC56 1237 aa15.3■□□□□ 0.04
RPUSD3-204ENST00000424438 PCDH18Q9HCL0 1135 aa15.3■□□□□ 0.04
RPUSD3-204ENST00000424438 KLC4Q9NSK0 619 aa15.3■□□□□ 0.04
RPUSD3-204ENST00000424438 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.3■□□□□ 0.04
RPUSD3-204ENST00000424438 CHKBQ9Y259 395 aa15.3■□□□□ 0.04
RPUSD3-204ENST00000424438 ANKRD66B4E2M5 251 aa15.29■□□□□ 0.04
RPUSD3-204ENST00000424438 ATMINO43313 823 aaPredicted RBP15.29■□□□□ 0.04
RPUSD3-204ENST00000424438 JCHAINP01591 159 aa15.29■□□□□ 0.04
RPUSD3-204ENST00000424438 RARAP10276 462 aa15.29■□□□□ 0.04
RPUSD3-204ENST00000424438 ZNF7P17097 686 aaPredicted RBP15.29■□□□□ 0.04
RPUSD3-204ENST00000424438 CCNCP24863 283 aa15.29■□□□□ 0.04
RPUSD3-204ENST00000424438 ZNF165P49910 485 aa15.29■□□□□ 0.04
RPUSD3-204ENST00000424438 RPS15P62841 145 aaKnown RBP15.29■□□□□ 0.04
RPUSD3-204ENST00000424438 TUBB3Q13509 450 aa15.29■□□□□ 0.04
RPUSD3-204ENST00000424438 PIGHQ14442 188 aaPredicted RBP15.29■□□□□ 0.04
RPUSD3-204ENST00000424438 PAFAH1B3Q15102 231 aaKnown RBP15.29■□□□□ 0.04
RPUSD3-204ENST00000424438 NADK2Q4G0N4 442 aa15.29■□□□□ 0.04
RPUSD3-204ENST00000424438 ZNF569Q5MCW4 686 aa15.29■□□□□ 0.04
RPUSD3-204ENST00000424438 IZUMO3Q5VZ72 239 aa15.29■□□□□ 0.04
RPUSD3-204ENST00000424438 KLHL35Q6PF15 583 aa15.29■□□□□ 0.04
RPUSD3-204ENST00000424438 LRRTM4Q86VH4 590 aa15.29■□□□□ 0.04
RPUSD3-204ENST00000424438 ADAMTS17Q8TE56 1095 aa15.29■□□□□ 0.04
RPUSD3-204ENST00000424438 RSC1A1Q92681 617 aa15.29■□□□□ 0.04
RPUSD3-204ENST00000424438 ING2Q9H160 280 aa15.29■□□□□ 0.04
RPUSD3-204ENST00000424438 ACSS2Q9NR19 701 aa15.29■□□□□ 0.04
RPUSD3-204ENST00000424438 LATS2Q9NRM7 1088 aa15.29■□□□□ 0.04
RPUSD3-204ENST00000424438 FANCLQ9NW38 375 aa15.29■□□□□ 0.04
RPUSD3-204ENST00000424438 CSMD1Q96PZ7 3565 aa15.29■□□□□ 0.04
RPUSD3-204ENST00000424438 F8P00451 2351 aa15.28■□□□□ 0.04
RPUSD3-204ENST00000424438 TCP11X1B4DZS4 312 aa15.28■□□□□ 0.04
RPUSD3-204ENST00000424438 SLC25A14O95258 325 aaPredicted RBP15.28■□□□□ 0.04
RPUSD3-204ENST00000424438 TIAF1O95411 115 aa15.28■□□□□ 0.04
RPUSD3-204ENST00000424438 LDLRP01130 860 aa15.28■□□□□ 0.04
RPUSD3-204ENST00000424438 FTLP02792 175 aaPredicted RBP15.28■□□□□ 0.04
RPUSD3-204ENST00000424438 BRAFP15056 766 aa15.28■□□□□ 0.04
RPUSD3-204ENST00000424438 PRKCIP41743 596 aa15.28■□□□□ 0.04
RPUSD3-204ENST00000424438 PDE1BQ01064 536 aa15.28■□□□□ 0.04
RPUSD3-204ENST00000424438 DSC2Q02487 901 aa15.28■□□□□ 0.04
RPUSD3-204ENST00000424438 UBXN1Q04323 297 aa15.28■□□□□ 0.04
RPUSD3-204ENST00000424438 ITKQ08881 620 aa15.28■□□□□ 0.04
RPUSD3-204ENST00000424438 IFI16Q16666 785 aaKnown RBP15.28■□□□□ 0.04
RPUSD3-204ENST00000424438 QPCTQ16769 361 aa15.28■□□□□ 0.04
RPUSD3-204ENST00000424438 PWWP2BQ6NUJ5 590 aa15.28■□□□□ 0.04
RPUSD3-204ENST00000424438 JMJD6Q6NYC1 403 aaPredicted RBP15.28■□□□□ 0.04
RPUSD3-204ENST00000424438 APTXQ7Z2E3 356 aaKnown RBP15.28■□□□□ 0.04
RPUSD3-204ENST00000424438 ADGRG6Q86SQ4 1221 aa15.28■□□□□ 0.04
RPUSD3-204ENST00000424438 TRAM1L1Q8N609 369 aa15.28■□□□□ 0.04
RPUSD3-204ENST00000424438 Q8NA96 180 aa15.28■□□□□ 0.04
RPUSD3-204ENST00000424438 GLIS1Q8NBF1 620 aa15.28■□□□□ 0.04
RPUSD3-204ENST00000424438 SIDT2Q8NBJ9 832 aaKnown RBP15.28■□□□□ 0.04
RPUSD3-204ENST00000424438 GLYATL1Q969I3 302 aa15.28■□□□□ 0.04
RPUSD3-204ENST00000424438 PNPLA2Q96AD5 504 aa15.28■□□□□ 0.04
RPUSD3-204ENST00000424438 ZNF514Q96K75 400 aaPredicted RBP15.28■□□□□ 0.04
RPUSD3-204ENST00000424438 MLPHQ9BV36 600 aaPredicted RBP15.28■□□□□ 0.04
RPUSD3-204ENST00000424438 ADGRE3Q9BY15 652 aa15.28■□□□□ 0.04
RPUSD3-204ENST00000424438 OR2AG1Q9H205 316 aa15.28■□□□□ 0.04
RPUSD3-204ENST00000424438 OSGEPL1Q9H4B0 414 aa15.28■□□□□ 0.04
RPUSD3-204ENST00000424438 SLC23A2Q9UGH3 650 aa15.28■□□□□ 0.04
RPUSD3-204ENST00000424438 G3BP2Q9UN86 482 aaKnown RBP15.28■□□□□ 0.04
RPUSD3-204ENST00000424438 FARSAQ9Y285 508 aaKnown RBP15.28■□□□□ 0.04
RPUSD3-204ENST00000424438 KIF1CO43896 1103 aaKnown RBP15.27■□□□□ 0.04
RPUSD3-204ENST00000424438 CPNE3O75131 537 aaKnown RBP15.27■□□□□ 0.04
RPUSD3-204ENST00000424438 CLDN1O95832 211 aa15.27■□□□□ 0.04
RPUSD3-204ENST00000424438 RAB40ALP0C0E4 278 aa15.27■□□□□ 0.04
RPUSD3-204ENST00000424438 IDSP22304 550 aa15.27■□□□□ 0.04
RPUSD3-204ENST00000424438 IL4RP24394 825 aa15.27■□□□□ 0.04
RPUSD3-204ENST00000424438 SLC25A11Q02978 314 aaKnown RBP15.27■□□□□ 0.04
RPUSD3-204ENST00000424438 GPR18Q14330 331 aa15.27■□□□□ 0.04
RPUSD3-204ENST00000424438 INSCQ1MX18 579 aa15.27■□□□□ 0.04
RPUSD3-204ENST00000424438 SMTNL2Q2TAL5 461 aa15.27■□□□□ 0.04
RPUSD3-204ENST00000424438 CCDC183Q5T5S1 534 aa15.27■□□□□ 0.04
RPUSD3-204ENST00000424438 C1QL3Q5VWW1 255 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms