RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 KCTD3Q9Y597 815 aa10.8□□□□□ -0.68
USP49-204ENST00000423567 ST14Q9Y5Y6 855 aa10.8□□□□□ -0.68
USP49-204ENST00000423567 SLC30A1Q9Y6M5 507 aa10.8□□□□□ -0.68
USP49-204ENST00000423567 GOLGA4Q13439 2230 aaKnown RBP10.79□□□□□ -0.68
USP49-204ENST00000423567 TRBV23OR9-2A0A075B6M9 112 aa10.79□□□□□ -0.68
USP49-204ENST00000423567 KIR2DS5A0A0G2JLQ3 304 aa10.79□□□□□ -0.68
USP49-204ENST00000423567 A0A0G2JNG1 304 aa10.79□□□□□ -0.68
USP49-204ENST00000423567 PDZK1P1A8MUH7 402 aa10.79□□□□□ -0.68
USP49-204ENST00000423567 D6RAR5 112 aa10.79□□□□□ -0.68
USP49-204ENST00000423567 CFAP99D6REC4 459 aa10.79□□□□□ -0.68
USP49-204ENST00000423567 KIR2DS3K7RE56 304 aa10.79□□□□□ -0.68
USP49-204ENST00000423567 NTN3O00634 580 aaPredicted RBP10.79□□□□□ -0.68
USP49-204ENST00000423567 KCNJ13O60928 360 aa10.79□□□□□ -0.68
USP49-204ENST00000423567 SRP72O76094 671 aaKnown RBP10.79□□□□□ -0.68
USP49-204ENST00000423567 F3P13726 295 aa10.79□□□□□ -0.68
USP49-204ENST00000423567 TPH1P17752 444 aa10.79□□□□□ -0.68
USP49-204ENST00000423567 IDSP22304 550 aa10.79□□□□□ -0.68
USP49-204ENST00000423567 GPR3P46089 330 aa10.79□□□□□ -0.68
USP49-204ENST00000423567 ZNF140P52738 457 aaPredicted RBP10.79□□□□□ -0.68
USP49-204ENST00000423567 NFATC2Q13469 925 aa10.79□□□□□ -0.68
USP49-204ENST00000423567 SEMA5AQ13591 1074 aa10.79□□□□□ -0.68
USP49-204ENST00000423567 PTPRCAPQ14761 206 aa10.79□□□□□ -0.68
USP49-204ENST00000423567 POU6F1Q14863 301 aa10.79□□□□□ -0.68
USP49-204ENST00000423567 KIR2DS5Q14953 304 aa10.79□□□□□ -0.68
USP49-204ENST00000423567 RTP5Q14D33 572 aa10.79□□□□□ -0.68
USP49-204ENST00000423567 SIX1Q15475 284 aaPredicted RBP10.79□□□□□ -0.68
USP49-204ENST00000423567 CLPPQ16740 277 aaPredicted RBP10.79□□□□□ -0.68
USP49-204ENST00000423567 AMZ1Q400G9 498 aa10.79□□□□□ -0.68
USP49-204ENST00000423567 MAP9Q49MG5 647 aa10.79□□□□□ -0.68
USP49-204ENST00000423567 GPRC6AQ5T6X5 926 aa10.79□□□□□ -0.68
USP49-204ENST00000423567 SNX20Q7Z614 316 aa10.79□□□□□ -0.68
USP49-204ENST00000423567 SLC9B2Q86UD5 537 aa10.79□□□□□ -0.68
USP49-204ENST00000423567 PROSER1Q86XN7 944 aa10.79□□□□□ -0.68
USP49-204ENST00000423567 SFTPA2Q8IWL1 248 aa10.79□□□□□ -0.68
USP49-204ENST00000423567 REXO1L1PQ8IX06 675 aa10.79□□□□□ -0.68
USP49-204ENST00000423567 SLC35F6Q8N357 371 aa10.79□□□□□ -0.68
USP49-204ENST00000423567 OR13C4Q8NGS5 318 aa10.79□□□□□ -0.68
USP49-204ENST00000423567 SLC37A2Q8TED4 501 aa10.79□□□□□ -0.68
USP49-204ENST00000423567 HEXDCQ8WVB3 486 aa10.79□□□□□ -0.68
USP49-204ENST00000423567 PATE1Q8WXA2 126 aa10.79□□□□□ -0.68
USP49-204ENST00000423567 ATXN7L3BQ96GX2 97 aa10.79□□□□□ -0.68
USP49-204ENST00000423567 AHCYL2Q96HN2 611 aaKnown RBP10.79□□□□□ -0.68
USP49-204ENST00000423567 PDLIM2Q96JY6 352 aa10.79□□□□□ -0.68
USP49-204ENST00000423567 SLC38A3Q99624 504 aa10.79□□□□□ -0.68
USP49-204ENST00000423567 KCNF1Q9H3M0 494 aa10.79□□□□□ -0.68
USP49-204ENST00000423567 SARS2Q9NP81 518 aaKnown RBP10.79□□□□□ -0.68
USP49-204ENST00000423567 PIH1D1Q9NWS0 290 aaKnown RBP10.79□□□□□ -0.68
USP49-204ENST00000423567 KCNK4Q9NYG8 393 aa10.79□□□□□ -0.68
USP49-204ENST00000423567 PCDHB1Q9Y5F3 818 aa10.79□□□□□ -0.68
USP49-204ENST00000423567 PCYT1BQ9Y5K3 369 aaPredicted RBP10.79□□□□□ -0.68
USP49-204ENST00000423567 LRP4O75096 1905 aa10.79□□□□□ -0.68
USP49-204ENST00000423567 CHD8Q9HCK8 2581 aa10.79□□□□□ -0.68
USP49-204ENST00000423567 GOLGA6L10A0A0M3HER8 536 aa10.78□□□□□ -0.68
USP49-204ENST00000423567 A0A1W2PQM1 296 aa10.78□□□□□ -0.68
USP49-204ENST00000423567 HEATR9A2RTY3 570 aa10.78□□□□□ -0.68
USP49-204ENST00000423567 AP3B1O00203 1094 aa10.78□□□□□ -0.68
USP49-204ENST00000423567 PGRMC1O00264 195 aaKnown RBP10.78□□□□□ -0.68
USP49-204ENST00000423567 LDB2O43679 373 aa10.78□□□□□ -0.68
USP49-204ENST00000423567 SUN1O94901 812 aa10.78□□□□□ -0.68
USP49-204ENST00000423567 CPNE6O95741 557 aa10.78□□□□□ -0.68
USP49-204ENST00000423567 APRTP07741 180 aa10.78□□□□□ -0.68
USP49-204ENST00000423567 ETS1P14921 441 aa10.78□□□□□ -0.68
USP49-204ENST00000423567 RBMS1P29558 406 aaKnown RBP10.78□□□□□ -0.68
USP49-204ENST00000423567 MC4RP32245 332 aa10.78□□□□□ -0.68
USP49-204ENST00000423567 FASLGP48023 281 aa10.78□□□□□ -0.68
USP49-204ENST00000423567 LSSP48449 732 aa10.78□□□□□ -0.68
USP49-204ENST00000423567 INHBCP55103 352 aa10.78□□□□□ -0.68
USP49-204ENST00000423567 OR1D5P58170 312 aa10.78□□□□□ -0.68
USP49-204ENST00000423567 GABREP78334 506 aa10.78□□□□□ -0.68
USP49-204ENST00000423567 BASP1P80723 227 aaKnown RBP10.78□□□□□ -0.68
USP49-204ENST00000423567 HHEXQ03014 270 aa10.78□□□□□ -0.68
USP49-204ENST00000423567 EIF3IQ13347 325 aaKnown RBP10.78□□□□□ -0.68
USP49-204ENST00000423567 MSLNQ13421 630 aaPredicted RBP10.78□□□□□ -0.68
USP49-204ENST00000423567 SKIDA1Q1XH10 827 aa10.78□□□□□ -0.68
USP49-204ENST00000423567 GPR33Q49SQ1 333 aa10.78□□□□□ -0.68
USP49-204ENST00000423567 KHDC1Q4VXA5 237 aaKnown RBP10.78□□□□□ -0.68
USP49-204ENST00000423567 C3orf38Q5JPI3 329 aa10.78□□□□□ -0.68
USP49-204ENST00000423567 IYDQ6PHW0 289 aa10.78□□□□□ -0.68
USP49-204ENST00000423567 TMEM220Q6QAJ8 160 aa10.78□□□□□ -0.68
USP49-204ENST00000423567 ZNF438Q7Z4V0 828 aa10.78□□□□□ -0.68
USP49-204ENST00000423567 PIM3Q86V86 326 aa10.78□□□□□ -0.68
USP49-204ENST00000423567 AMZ2Q86W34 360 aa10.78□□□□□ -0.68
USP49-204ENST00000423567 TRIM48Q8IWZ4 208 aa10.78□□□□□ -0.68
USP49-204ENST00000423567 RASGEF1CQ8N431 466 aa10.78□□□□□ -0.68
USP49-204ENST00000423567 SFRP1Q8N474 314 aa10.78□□□□□ -0.68
USP49-204ENST00000423567 OR52K1Q8NGK4 314 aa10.78□□□□□ -0.68
USP49-204ENST00000423567 OR10G6Q8NH81 332 aa10.78□□□□□ -0.68
USP49-204ENST00000423567 WDR36Q8NI36 951 aaKnown RBP10.78□□□□□ -0.68
USP49-204ENST00000423567 STYXQ8WUJ0 223 aa10.78□□□□□ -0.68
USP49-204ENST00000423567 DNAJC1Q96KC8 554 aaKnown RBP10.78□□□□□ -0.68
USP49-204ENST00000423567 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.78□□□□□ -0.68
USP49-204ENST00000423567 POLR1BQ9H9Y6 1135 aa10.78□□□□□ -0.68
USP49-204ENST00000423567 EPB41L5Q9HCM4 733 aa10.78□□□□□ -0.68
USP49-204ENST00000423567 PRDM8Q9NQV8 689 aa10.78□□□□□ -0.68
USP49-204ENST00000423567 NLE1Q9NVX2 485 aaPredicted RBP10.78□□□□□ -0.68
USP49-204ENST00000423567 AKAP7Q9P0M2 348 aaPredicted RBP10.78□□□□□ -0.68
USP49-204ENST00000423567 TBC1D29Q9UFV1 150 aa10.78□□□□□ -0.68
USP49-204ENST00000423567 TMPRSS11EQ9UL52 423 aa10.78□□□□□ -0.68
USP49-204ENST00000423567 ENTPD2Q9Y5L3 495 aa10.78□□□□□ -0.68
USP49-204ENST00000423567 DNMT3AQ9Y6K1 912 aaPredicted RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms